Rmu_co8193822.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8193822.1
Physical Location & Seq
Forward (+)
23 .. 586
564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8193822.1_g000001.1.cds

Sequence Viewer

Length: 453 bp
atgtcaccggagtatgcaatggaaggactattttcagtgaagtctgatgtctacagttttggtgttttgctgctagaaattgttactggcagaaagaacaccggttactactctgataatcctgactcaaatctggttggacatgtttgggatttgtggaaagaaggccgagccttggaaatcgttgacccatctttgggagaatcctaccccatatgtgaagttctacggtgcattcaaatcgcactctcatgcgtggaagagtatgcaaatgaccggccaaccatgtcaaaagttgtgtctctgttaggcaacgatgcagctcttccttcaccaagaaaacctggatttctgttgaagagaagtaactataccagtggagaccccagtactagtactagagatgctaattccataaattatgttacatgtagtatagttgaagctcgctaa

Protein Analysis

150

Amino Acids

16.53

Weight (kDa)

4.86

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 51
AcoI YGGCCR 1 cut(s) 278
AfaI GTAC 2 cut(s) 391, 397
AfiI CCNNNNNNNGG 3 cut(s) 175, 196, 197
AflIII ACRYGT 2 cut(s) 142, 428
AgeI ACCGGT 1 cut(s) 101
AgsI TTSAA 3 cut(s) 239, 358, 443
AhlI ACTAGT 1 cut(s) 392
AjnI CCWGG 1 cut(s) 343
AluBI AGCT 2 cut(s) 323, 446
AluI AGCT 2 cut(s) 323, 446
Alw26I GTCTC 2 cut(s) 306, 375
AoxI GGCC 2 cut(s) 166, 278
ApeKI GCWGC 2 cut(s) 70, 320
ArsI GACNNNNNNTTYG 2 cut(s) 284, 316
AsiGI ACCGGT 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 324
BarI GAAGNNNNNNTAC 2 cut(s) 355, 387
BbvI GCAGC 2 cut(s) 57, 332
BccI CCATC 1 cut(s) 199
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BciT130I CCWGG 1 cut(s) 345
BcoDI GTCTC 2 cut(s) 306, 375
BcuI ACTAGT 1 cut(s) 392
BfaI CTAG 3 cut(s) 74, 393, 399
BfmI CTRYAG 1 cut(s) 52
BisI GCNGC 2 cut(s) 71, 321
BlsI GCNGC 2 cut(s) 72, 322
BmcAI AGTACT 2 cut(s) 391, 397
Bme1390I CCNGG 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 345
BmrI ACTGGG 1 cut(s) 381
BmsI GCATC 2 cut(s) 307, 394
BmuI ACTGGG 1 cut(s) 381
BsaI GGTCTC 1 cut(s) 375
BsaJI CCNNGG 1 cut(s) 174
BsaWI WCCGGW 2 cut(s) 7, 101
Bsc4I CCNNNNNNNGG 3 cut(s) 175, 196, 197
Bse118I RCCGGY 2 cut(s) 101, 276
Bse1I ACTGG 3 cut(s) 91, 375, 387
Bse3DI GCAATG 1 cut(s) 24
BseBI CCWGG 1 cut(s) 345
BseDI CCNNGG 1 cut(s) 174
BseLI CCNNNNNNNGG 3 cut(s) 175, 196, 197
BseMI GCAATG 1 cut(s) 24
BseNI ACTGG 3 cut(s) 91, 375, 387
BseXI GCAGC 2 cut(s) 57, 332
BshFI GGCC 2 cut(s) 168, 280
BshTI ACCGGT 1 cut(s) 101
BsiSI CCGG 3 cut(s) 8, 102, 277
BslI CCNNNNNNNGG 3 cut(s) 175, 196, 197
BsmAI GTCTC 2 cut(s) 306, 375
BsmI GAATGC 1 cut(s) 234
BsnI GGCC 2 cut(s) 168, 280
Bso31I GGTCTC 1 cut(s) 375
BspANI GGCC 2 cut(s) 168, 280
BspQI GCTCTTC 1 cut(s) 330
BspTNI GGTCTC 1 cut(s) 375
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 2 cut(s) 101, 276
BsrI ACTGG 3 cut(s) 91, 375, 387
BssAI RCCGGY 2 cut(s) 101, 276
BssECI CCNNGG 1 cut(s) 174
BssT1I CCWWGG 1 cut(s) 174
Bst2UI CCWGG 1 cut(s) 345
Bst4CI ACNGT 2 cut(s) 56, 231
Bst6I CTCTTC 3 cut(s) 255, 330, 353
BstC8I GCNNGC 1 cut(s) 448
BstMAI GTCTC 2 cut(s) 306, 375
BstNI CCWGG 1 cut(s) 345
BstNSI RCATGY 2 cut(s) 146, 432
BstSCI CCNGG 1 cut(s) 343
BstSFI CTRYAG 1 cut(s) 52
BstV1I GCAGC 2 cut(s) 57, 332
BsuRI GGCC 2 cut(s) 168, 280
BtsIMutI CAGTG 2 cut(s) 42, 382
Cac8I GCNNGC 1 cut(s) 448
Cfr10I RCCGGY 2 cut(s) 101, 276
Csp6I GTAC 2 cut(s) 390, 396
CspAI ACCGGT 1 cut(s) 101
CviAII CATG 4 cut(s) 143, 252, 286, 429
CviJI RGCY 5 cut(s) 168, 173, 280, 323, 446
CviKI_1 RGCY 5 cut(s) 168, 173, 280, 323, 446
CviQI GTAC 2 cut(s) 390, 396
EaeI YGGCCR 1 cut(s) 278
Eam1104I CTCTTC 3 cut(s) 255, 330, 353
EarI CTCTTC 3 cut(s) 255, 330, 353
Eco130I CCWWGG 1 cut(s) 174
Eco31I GGTCTC 1 cut(s) 375
EcoRII CCWGG 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 174
FaeI CATG 4 cut(s) 146, 255, 289, 432
FatI CATG 4 cut(s) 142, 251, 285, 428
FauNDI CATATG 1 cut(s) 215
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 2 cut(s) 71, 321
Fsp4HI GCNGC 2 cut(s) 71, 321
FspBI CTAG 3 cut(s) 74, 393, 399
GluI GCNGC 2 cut(s) 71, 321
HaeIII GGCC 2 cut(s) 168, 280
HapII CCGG 3 cut(s) 8, 102, 277
Hin1II CATG 4 cut(s) 146, 255, 289, 432
HincII GTYRAC 1 cut(s) 187
HindII GTYRAC 1 cut(s) 187
HinfI GANTC 2 cut(s) 125, 203
HpaII CCGG 3 cut(s) 8, 102, 277
HphI GGTGA 1 cut(s) 324
Hpy166II GTNNAC 2 cut(s) 52, 187
Hpy188I TCNGA 2 cut(s) 46, 115
Hpy188III TCNNGA 1 cut(s) 122
Hpy8I GTNNAC 2 cut(s) 52, 187
HpyAV CCTTC 3 cut(s) 17, 158, 339
HpyCH4III ACNGT 2 cut(s) 56, 231
HpyCH4V TGCA 4 cut(s) 17, 234, 269, 320
Hsp92II CATG 4 cut(s) 146, 255, 289, 432
LguI GCTCTTC 1 cut(s) 330
Lsp1109I GCAGC 2 cut(s) 57, 332
LweI GCATC 2 cut(s) 307, 394
MaeI CTAG 3 cut(s) 74, 393, 399
MaeIII GTNAC 5 cut(s) 3, 82, 104, 365, 424
MboII GAAGA 3 cut(s) 272, 317, 370
MluCI AATT 3 cut(s) 78, 409, 418
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 1 cut(s) 118
MslI CAYNNNNRTG 1 cut(s) 250
MspI CCGG 3 cut(s) 8, 102, 277
MspR9I CCNGG 1 cut(s) 345
Mva1269I GAATGC 1 cut(s) 234
MvaI CCWGG 1 cut(s) 345
NdeI CATATG 1 cut(s) 215
NlaIII CATG 4 cut(s) 146, 255, 289, 432
NmeAIII GCCGAG 1 cut(s) 194
NmuCI GTSAC 1 cut(s) 3
NspI RCATGY 2 cut(s) 146, 432
PciI ACATGT 2 cut(s) 142, 428
PciSI GCTCTTC 1 cut(s) 330
PctI GAATGC 1 cut(s) 234
PfeI GAWTC 1 cut(s) 203
PinAI ACCGGT 1 cut(s) 101
PkrI GCNGC 2 cut(s) 72, 322
PleI GAGTC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 119
PscI ACATGT 2 cut(s) 142, 428
Psp6I CCWGG 1 cut(s) 343
PspGI CCWGG 1 cut(s) 343
PsrI GAACNNNNNNTAC 2 cut(s) 89, 121
RsaI GTAC 2 cut(s) 391, 397
RsaNI GTAC 2 cut(s) 390, 396
RseI CAYNNNNRTG 1 cut(s) 250
SapI GCTCTTC 1 cut(s) 330
SatI GCNGC 2 cut(s) 71, 321
ScaI AGTACT 2 cut(s) 391, 397
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 345
SetI ASST 3 cut(s) 325, 346, 448
SfaNI GCATC 2 cut(s) 307, 394
SfcI CTRYAG 1 cut(s) 52
SmiMI CAYNNNNRTG 1 cut(s) 250
SpeI ACTAGT 1 cut(s) 392
Sse9I AATT 3 cut(s) 78, 409, 418
SspMI CTAG 3 cut(s) 74, 393, 399
StyD4I CCNGG 1 cut(s) 343
StyI CCWWGG 1 cut(s) 174
TaaI ACNGT 2 cut(s) 56, 231
TasI AATT 3 cut(s) 78, 409, 418
TatI WGTACW 2 cut(s) 389, 395
TfiI GAWTC 1 cut(s) 203
TscAI CASTG 2 cut(s) 42, 382
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 2 cut(s) 70, 320
Tsp45I GTSAC 1 cut(s) 3
TspRI CASTG 2 cut(s) 42, 382
XceI RCATGY 2 cut(s) 146, 432
XmiI GTMKAC 1 cut(s) 51
XspI CTAG 3 cut(s) 74, 393, 399
ZrmI AGTACT 2 cut(s) 391, 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.