pycom03g16510

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
17692301 .. 17693517
1217 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g16510.4

Sequence Viewer

Length: 912 bp
ATGGCGGTTAAGAGACTGTCACAAAGTTCTGGTCAAGGACAGGCCGAGTTCAAAAATGAAGTTATACTGATAGCCAAACTTCAGCACCGGAATCTTGTAAAGCTTATTGGTTGTTGCATTGAGGGAGATGAGAAATTGCTGATTTATGAATACATGCCAAACAAAAGCTTGGACTTCTACATTTTTGATCAAACTCAAGGTAGAAAGTTGGATTGGTCTCGCCGCTTCCACATTACCCGTGGGATAGCTAGGGGACTTCTCTATCTGCATCAAGATTCCAGACTGAGGATTATTCATAGAGATCTTAAAGCCAGTAATGTGCTGCTTGACAAAGATATGAACCCGAAAATCTCAGACTTTGGCATGGCTAGACTTTTTGGAGGAGATCAAACTGAAGCAGTTACAAAACGAGTTGTTGGAACCTATGGCTATATGGCACCAGAATATGCGATTGATGGTCATTTCTCTATAAAATCCGATGTTTTCAGCTTCGGTATTTTACTGCTGGAGACACTAAGTGGAAAGAGAAGTAGAGGGTTTTATGATCCAAATCACAATCTCAACCTAATTGGACATGCGTGGCGATTGTGGAAAGAAGGGCGGTCTTTAGAGCTGATTGATGAATACTTAACAGACTCGTGCAGTCTATCGGAAGTCTTGCGTTGCATACATGTTAGTCTTTTATGTGTGCAACATCTTCCAGAAGACAGGCCAACCATGTCATCTGTGGTTCTGATGTTAGGTGGTGAGAGTGCATTGCCTGAACCCAAAAAGCCAGGTTTCTTTATAGGAAAATATTCATCATCTGAAGCAGAATGTTCGAGTAAGAACGAAACATTTTCCCTTTCCGGTGTGATAAAAGAAACATGTTCAACGACTGAATCTTCCATAACCGTGTTGGAGCCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

304

Amino Acids

34.22

Weight (kDa)

7.63

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 436
AciI CCGC 3 cut(s) 5, 223, 601
AclWI GGATC 1 cut(s) 539
AcuI CTGAAG 3 cut(s) 65, 414, 828
AdeI CACNNNGTG 1 cut(s) 518
AfiI CCNNNNNNNGG 1 cut(s) 285
AflIII ACRYGT 2 cut(s) 670, 866
AgsI TTSAA 2 cut(s) 52, 873
AjnI CCWGG 1 cut(s) 775
AjuI GAANNNNNNNTTGG 2 cut(s) 196, 228
AluBI AGCT 5 cut(s) 103, 168, 248, 489, 613
AluI AGCT 5 cut(s) 103, 168, 248, 489, 613
Alw26I GTCTC 3 cut(s) 7, 222, 503
AlwI GGATC 1 cut(s) 539
AoxI GGCC 2 cut(s) 42, 710
ApeKI GCWGC 1 cut(s) 322
ArsI GACNNNNNNTTYG 2 cut(s) 16, 48
Asp700I GAANNNNTTC 1 cut(s) 796
AsuHPI GGTGA 1 cut(s) 758
BanI GGYRCC 1 cut(s) 436
BauI CACGAG 1 cut(s) 637
BbsI GAAGAC 1 cut(s) 711
BbvI GCAGC 1 cut(s) 309
BccI CCATC 1 cut(s) 449
BcgI CGANNNNNNTGC 2 cut(s) 801, 835
BciT130I CCWGG 1 cut(s) 777
BclI TGATCA 1 cut(s) 187
BcoDI GTCTC 3 cut(s) 7, 222, 503
BfaI CTAG 2 cut(s) 249, 369
BglII AGATCT 1 cut(s) 301
BisI GCNGC 2 cut(s) 223, 323
BlsI GCNGC 2 cut(s) 224, 324
Bme1390I CCNGG 1 cut(s) 777
BmiI GGNNCC 3 cut(s) 421, 438, 903
BmrFI CCNGG 1 cut(s) 777
BmsI GCATC 1 cut(s) 277
BpiI GAAGAC 1 cut(s) 711
BpmI CTGGAG 1 cut(s) 527
BpuEI CTTGAG 1 cut(s) 180
BsaBI GATNNNNATC 1 cut(s) 549
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 1 cut(s) 238
BsaWI WCCGGW 2 cut(s) 87, 848
Bsc4I CCNNNNNNNGG 1 cut(s) 285
Bse1I ACTGG 1 cut(s) 312
Bse3DI GCAATG 1 cut(s) 755
Bse8I GATNNNNATC 1 cut(s) 549
BseBI CCWGG 1 cut(s) 777
BseDI CCNNGG 1 cut(s) 238
BseJI GATNNNNATC 1 cut(s) 549
BseLI CCNNNNNNNGG 1 cut(s) 285
BseMI GCAATG 1 cut(s) 755
BseMII CTCAG 2 cut(s) 275, 366
BseNI ACTGG 1 cut(s) 312
BseRI GAGGAG 1 cut(s) 396
BseXI GCAGC 1 cut(s) 309
BsgI GTGCAG 1 cut(s) 661
BshFI GGCC 2 cut(s) 44, 712
BshNI GGYRCC 1 cut(s) 436
BsiSI CCGG 2 cut(s) 88, 849
BslFI GGGAC 1 cut(s) 267
BslI CCNNNNNNNGG 1 cut(s) 285
BsmAI GTCTC 3 cut(s) 7, 222, 503
BsmFI GGGAC 1 cut(s) 267
BsnI GGCC 2 cut(s) 44, 712
Bso31I GGTCTC 1 cut(s) 222
Bsp143I GATC 4 cut(s) 187, 301, 385, 544
BspACI CCGC 3 cut(s) 5, 223, 601
BspANI GGCC 2 cut(s) 44, 712
BspCNI CTCAG 2 cut(s) 276, 365
BspLI GGNNCC 3 cut(s) 421, 438, 903
BspPI GGATC 1 cut(s) 539
BspT107I GGYRCC 1 cut(s) 436
BspTNI GGTCTC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 755
BsrI ACTGG 1 cut(s) 312
BssECI CCNNGG 1 cut(s) 238
BssMI GATC 4 cut(s) 187, 301, 385, 544
BssSI CACGAG 1 cut(s) 637
Bst2BI CACGAG 1 cut(s) 637
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 2 cut(s) 18, 895
BstDEI CTNAG 3 cut(s) 284, 352, 515
BstDSI CCRYGG 1 cut(s) 238
BstKTI GATC 4 cut(s) 190, 304, 388, 547
BstMAI GTCTC 3 cut(s) 7, 222, 503
BstMBI GATC 4 cut(s) 187, 301, 385, 544
BstNI CCWGG 1 cut(s) 777
BstNSI RCATGY 4 cut(s) 157, 578, 674, 870
BstSCI CCNGG 1 cut(s) 775
BstV1I GCAGC 1 cut(s) 309
BstV2I GAAGAC 1 cut(s) 711
BstX2I RGATCY 1 cut(s) 301
BstYI RGATCY 1 cut(s) 301
BsuRI GGCC 2 cut(s) 44, 712
BtgI CCRYGG 1 cut(s) 238
CviAII CATG 6 cut(s) 154, 364, 575, 671, 718, 867
DdeI CTNAG 3 cut(s) 284, 352, 515
DpnI GATC 4 cut(s) 189, 303, 387, 546
DpnII GATC 4 cut(s) 187, 301, 385, 544
DraIII CACNNNGTG 1 cut(s) 518
Eco31I GGTCTC 1 cut(s) 222
Eco57I CTGAAG 3 cut(s) 65, 414, 828
EcoRII CCWGG 1 cut(s) 775
FaeI CATG 6 cut(s) 157, 367, 578, 674, 721, 870
FaqI GGGAC 1 cut(s) 267
FatI CATG 6 cut(s) 153, 363, 574, 670, 717, 866
FbaI TGATCA 1 cut(s) 187
Fnu4HI GCNGC 2 cut(s) 223, 323
Fsp4HI GCNGC 2 cut(s) 223, 323
FspBI CTAG 2 cut(s) 249, 369
GluI GCNGC 2 cut(s) 223, 323
GsuI CTGGAG 1 cut(s) 527
HaeIII GGCC 2 cut(s) 44, 712
HapII CCGG 2 cut(s) 88, 849
Hin1II CATG 6 cut(s) 157, 367, 578, 674, 721, 870
HindIII AAGCTT 2 cut(s) 101, 166
HinfI GANTC 4 cut(s) 91, 275, 635, 881
HpaII CCGG 2 cut(s) 88, 849
HphI GGTGA 1 cut(s) 758
Hpy188I TCNGA 5 cut(s) 355, 478, 652, 735, 808
Hpy188III TCNNGA 3 cut(s) 272, 279, 701
HpyAV CCTTC 1 cut(s) 590
HpyCH4III ACNGT 2 cut(s) 18, 895
HpyCH4V TGCA 6 cut(s) 117, 268, 642, 666, 691, 755
HpyF3I CTNAG 3 cut(s) 284, 352, 515
Hsp92II CATG 6 cut(s) 157, 367, 578, 674, 721, 870
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 4 cut(s) 187, 301, 385, 544
LmnI GCTCC 1 cut(s) 901
Lsp1109I GCAGC 1 cut(s) 309
LweI GCATC 1 cut(s) 277
MaeI CTAG 2 cut(s) 249, 369
MaeIII GTNAC 2 cut(s) 18, 400
MalI GATC 4 cut(s) 189, 303, 387, 546
MboI GATC 4 cut(s) 187, 301, 385, 544
MboII GAAGA 3 cut(s) 689, 716, 876
MflI RGATCY 1 cut(s) 301
MluCI AATT 2 cut(s) 134, 567
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 3 cut(s) 189, 397, 879
MnlI CCTC 4 cut(s) 115, 279, 374, 527
MroXI GAANNNNTTC 1 cut(s) 796
MseI TTAA 3 cut(s) 9, 306, 629
MslI CAYNNNNRTG 1 cut(s) 893
MspI CCGG 2 cut(s) 88, 849
MspR9I CCNGG 1 cut(s) 777
MvaI CCWGG 1 cut(s) 777
NdeII GATC 4 cut(s) 187, 301, 385, 544
NlaIII CATG 6 cut(s) 157, 367, 578, 674, 721, 870
NlaIV GGNNCC 3 cut(s) 421, 438, 903
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 1 cut(s) 18
NspI RCATGY 4 cut(s) 157, 578, 674, 870
PciI ACATGT 2 cut(s) 670, 866
PdmI GAANNNNTTC 1 cut(s) 796
PfeI GAWTC 3 cut(s) 91, 275, 881
PkrI GCNGC 2 cut(s) 224, 324
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
PscI ACATGT 2 cut(s) 670, 866
Psp6I CCWGG 1 cut(s) 775
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 3 cut(s) 421, 438, 903
PsuI RGATCY 1 cut(s) 301
RseI CAYNNNNRTG 1 cut(s) 893
SaqAI TTAA 3 cut(s) 9, 306, 629
SatI GCNGC 2 cut(s) 223, 323
Sau3AI GATC 4 cut(s) 187, 301, 385, 544
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 1 cut(s) 777
SfaNI GCATC 1 cut(s) 277
SmiMI CAYNNNNRTG 1 cut(s) 893
SmlI CTYRAG 1 cut(s) 195
SmoI CTYRAG 1 cut(s) 195
Sse9I AATT 2 cut(s) 134, 567
SsiI CCGC 3 cut(s) 5, 223, 601
SspI AATATT 1 cut(s) 797
SspMI CTAG 2 cut(s) 249, 369
StyD4I CCNGG 1 cut(s) 775
TaaI ACNGT 2 cut(s) 18, 895
TaqI TCGA 2 cut(s) 821, 907
TasI AATT 2 cut(s) 134, 567
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 3 cut(s) 91, 275, 881
Tru1I TTAA 3 cut(s) 9, 306, 629
Tru9I TTAA 3 cut(s) 9, 306, 629
TseFI GTSAC 1 cut(s) 18
TseI GCWGC 1 cut(s) 322
Tsp45I GTSAC 1 cut(s) 18
TspDTI ATGAA 6 cut(s) 72, 162, 284, 353, 636, 789
XceI RCATGY 4 cut(s) 157, 578, 674, 870
XcmI CCANNNNNNNNNTGG 3 cut(s) 236, 724, 895
XmnI GAANNNNTTC 1 cut(s) 796
XspI CTAG 2 cut(s) 249, 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.