RLG00000031277

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
3647258 .. 3650076
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031277

Sequence Viewer

Length: 825 bp
ATGTACTGGTCTGCTCCAATAGAGCGTTGTGATATTTATGGACAGTGCGGCCCAAATGGCAACTGCGACCCATACAATGTAAAAGGAGACAAAATGAATATCTATTTGGACATAGTACAGGGTCAACGTGAATCCAACAGAGTTTATTTAGATTGGACCAGACGCTTTGAGATAATTTGTGGAATTGTTAGAGGGATCTTGTATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCCAGCAATGTTCTACTAGACGCTTCTATGAATCCCAAAATTGCAGATTTTGGTATGGCTAGAATATTTAGGGGAGATCAAAATGAAGCAAATACGAATCGGGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATACGAGGACAGTTTTCAGTAAAATCAGATGTATATAGTTTTGGGGTTTTACTACTAGAAATCATTACAGGCAGAAAGAACAGAGTTTATTACCAAGAGGAATCTCCCGACTCAAATTTGGTCGAACATGTTTGGAACTTGTGGCGAGAAAGTAATGCCTTGGAAGTCGTTGATTCATCTCTGGGTGAATCATACCCCAAGAATGAAGTTCTGAGATGTATCCAAATTGCTCTCTTGTGTGTGCAAGAGTATGCAATTGACCGGCCAACCATGTCGGCAGTTCTTATCATGTTAGGTAATGATGCAACACTTCCTTCACCTAGACAACCTGCATTTCTATTGCAGAGAAGTGCCACTAGTACTGGAGACTCACCAACCCAAGATGGAGCTAATTCTGTAAATGATGTGACATGTACTATGGTAGAAGCTCGCTAG

Protein Analysis

275

Amino Acids

30.99

Weight (kDa)

5.34

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 47 - 165 1.2e-26 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 50 - 225 8.9e-26 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 230 - 274 2.3e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 727
AciI CCGC 1 cut(s) 48
AclWI GGATC 1 cut(s) 203
AcoI YGGCCR 1 cut(s) 653
AcsI RAATTY 1 cut(s) 505
AfaI GTAC 4 cut(s) 5, 117, 751, 805
AflIII ACRYGT 2 cut(s) 517, 800
AgsI TTSAA 1 cut(s) 219
AhlI ACTAGT 1 cut(s) 746
AjuI GAANNNNNNNTTGG 2 cut(s) 89, 121
AluBI AGCT 2 cut(s) 779, 818
AluI AGCT 2 cut(s) 779, 818
Alw26I GTCTC 2 cut(s) 81, 750
AlwI GGATC 1 cut(s) 203
AoxI GGCC 3 cut(s) 49, 249, 653
ApoI RAATTY 1 cut(s) 505
AspS9I GGNCC 2 cut(s) 50, 156
AsuHPI GGTGA 4 cut(s) 369, 587, 699, 753
AvaII GGWCC 1 cut(s) 156
BccI CCATC 1 cut(s) 767
BciVI GTATCC 1 cut(s) 620
BcoDI GTCTC 2 cut(s) 81, 750
BcuI ACTAGT 1 cut(s) 746
BfaI CTAG 6 cut(s) 266, 309, 446, 711, 747, 823
BfuAI ACCTGC 1 cut(s) 727
BfuI GTATCC 1 cut(s) 620
BglI GCCNNNNNGGC 1 cut(s) 57
BglII AGATCT 1 cut(s) 241
BisI GCNGC 1 cut(s) 49
BlsI GCNGC 1 cut(s) 50
BmcAI AGTACT 1 cut(s) 751
Bme18I GGWCC 1 cut(s) 156
BmgT120I GGNCC 2 cut(s) 50, 156
BmsI GCATC 1 cut(s) 682
BpmI CTGGAG 1 cut(s) 774
BsaJI CCNNGG 1 cut(s) 549
Bse118I RCCGGY 1 cut(s) 651
Bse1I ACTGG 2 cut(s) 11, 757
Bse3DI GCAATG 1 cut(s) 262
BseDI CCNNGG 1 cut(s) 549
BseGI GGATG 1 cut(s) 231
BseMI GCAATG 1 cut(s) 262
BseMII CTCAG 1 cut(s) 593
BseNI ACTGG 2 cut(s) 11, 757
BshFI GGCC 3 cut(s) 51, 251, 655
BsiSI CCGG 1 cut(s) 652
BsmAI GTCTC 2 cut(s) 81, 750
BsnI GGCC 3 cut(s) 51, 251, 655
Bsp143I GATC 3 cut(s) 195, 241, 325
BspACI CCGC 1 cut(s) 48
BspANI GGCC 3 cut(s) 51, 251, 655
BspCNI CTCAG 1 cut(s) 594
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 1 cut(s) 203
BsrDI GCAATG 1 cut(s) 262
BsrFI RCCGGY 1 cut(s) 651
BsrI ACTGG 2 cut(s) 11, 757
BssAI RCCGGY 1 cut(s) 651
BssECI CCNNGG 1 cut(s) 549
BssMI GATC 3 cut(s) 195, 241, 325
BssT1I CCWWGG 1 cut(s) 549
Bst4CI ACNGT 2 cut(s) 45, 402
BstC8I GCNNGC 2 cut(s) 253, 820
BstDEI CTNAG 1 cut(s) 602
BstF5I GGATG 1 cut(s) 231
BstKTI GATC 3 cut(s) 198, 244, 328
BstMAI GTCTC 2 cut(s) 81, 750
BstMBI GATC 3 cut(s) 195, 241, 325
BstMWI GCNNNNNNNGC 1 cut(s) 57
BstNSI RCATGY 2 cut(s) 521, 804
BstX2I RGATCY 2 cut(s) 195, 241
BstYI RGATCY 2 cut(s) 195, 241
BsuI GTATCC 1 cut(s) 620
BsuRI GGCC 3 cut(s) 51, 251, 655
BtsCI GGATG 1 cut(s) 231
BtsIMutI CAGTG 1 cut(s) 50
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 2 cut(s) 253, 820
Cfr10I RCCGGY 1 cut(s) 651
Cfr13I GGNCC 2 cut(s) 50, 156
CseI GACGC 2 cut(s) 171, 278
Csp6I GTAC 4 cut(s) 4, 116, 750, 804
CviAII CATG 4 cut(s) 518, 661, 679, 801
CviJI RGCY 6 cut(s) 51, 251, 308, 655, 779, 818
CviKI_1 RGCY 6 cut(s) 51, 251, 308, 655, 779, 818
CviQI GTAC 4 cut(s) 4, 116, 750, 804
DdeI CTNAG 1 cut(s) 602
DpnI GATC 3 cut(s) 197, 243, 327
DpnII GATC 3 cut(s) 195, 241, 325
EaeI YGGCCR 1 cut(s) 653
Eco130I CCWWGG 1 cut(s) 549
Eco47I GGWCC 1 cut(s) 156
EcoT14I CCWWGG 1 cut(s) 549
ErhI CCWWGG 1 cut(s) 549
FaeI CATG 4 cut(s) 521, 664, 682, 804
FatI CATG 4 cut(s) 517, 660, 678, 800
FauNDI CATATG 1 cut(s) 364
Fnu4HI GCNGC 1 cut(s) 49
FokI GGATG 1 cut(s) 218
Fsp4HI GCNGC 1 cut(s) 49
FspBI CTAG 6 cut(s) 266, 309, 446, 711, 747, 823
GluI GCNGC 1 cut(s) 49
GsuI CTGGAG 1 cut(s) 774
HaeIII GGCC 3 cut(s) 51, 251, 655
HapII CCGG 1 cut(s) 652
HgaI GACGC 2 cut(s) 171, 278
Hin1II CATG 4 cut(s) 521, 664, 682, 804
HincII GTYRAC 1 cut(s) 125
HindII GTYRAC 1 cut(s) 125
HpaII CCGG 1 cut(s) 652
HphI GGTGA 4 cut(s) 369, 587, 699, 753
Hpy166II GTNNAC 1 cut(s) 125
Hpy188I TCNGA 2 cut(s) 418, 603
Hpy188III TCNNGA 3 cut(s) 212, 219, 497
Hpy8I GTNNAC 1 cut(s) 125
HpyAV CCTTC 1 cut(s) 714
HpyCH4III ACNGT 2 cut(s) 45, 402
HpyCH4IV ACGT 1 cut(s) 127
HpyCH4V TGCA 7 cut(s) 293, 389, 634, 644, 695, 722, 733
HpyF10VI GCNNNNNNNGC 1 cut(s) 57
HpyF3I CTNAG 1 cut(s) 602
HpySE526I ACGT 1 cut(s) 127
Hsp92II CATG 4 cut(s) 521, 664, 682, 804
Kzo9I GATC 3 cut(s) 195, 241, 325
LmnI GCTCC 2 cut(s) 19, 776
LpnPI CCDG 9 cut(s) 104, 172, 265, 393, 444, 557, 665, 732, 738
LweI GCATC 1 cut(s) 682
MaeI CTAG 6 cut(s) 266, 309, 446, 711, 747, 823
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 2 cut(s) 375, 796
MalI GATC 3 cut(s) 197, 243, 327
MboI GATC 3 cut(s) 195, 241, 325
MboII GAAGA 1 cut(s) 197
MfeI CAATTG 1 cut(s) 645
MflI RGATCY 2 cut(s) 195, 241
MluCI AATT 7 cut(s) 174, 183, 288, 505, 615, 645, 781
MlyI GAGTC 2 cut(s) 494, 752
MmeI TCCRAC 2 cut(s) 159, 337
MnlI CCTC 3 cut(s) 185, 389, 481
MseI TTAA 1 cut(s) 224
MspI CCGG 1 cut(s) 652
MunI CAATTG 1 cut(s) 645
MwoI GCNNNNNNNGC 1 cut(s) 57
NdeI CATATG 1 cut(s) 364
NdeII GATC 3 cut(s) 195, 241, 325
NlaIII CATG 4 cut(s) 521, 664, 682, 804
NmuCI GTSAC 2 cut(s) 375, 796
NspI RCATGY 2 cut(s) 521, 804
PciI ACATGT 2 cut(s) 517, 800
PfeI GAWTC 8 cut(s) 131, 215, 228, 280, 346, 491, 563, 578
PkrI GCNGC 1 cut(s) 50
PleI GAGTC 2 cut(s) 494, 752
PpsI GAGTC 2 cut(s) 494, 752
PscI ACATGT 2 cut(s) 517, 800
PspPI GGNCC 2 cut(s) 50, 156
PsuI RGATCY 2 cut(s) 195, 241
RsaI GTAC 4 cut(s) 5, 117, 751, 805
RsaNI GTAC 4 cut(s) 4, 116, 750, 804
SaqAI TTAA 1 cut(s) 224
SatI GCNGC 1 cut(s) 49
Sau3AI GATC 3 cut(s) 195, 241, 325
Sau96I GGNCC 2 cut(s) 50, 156
ScaI AGTACT 1 cut(s) 751
SchI GAGTC 2 cut(s) 494, 752
SetI ASST 6 cut(s) 130, 688, 712, 721, 781, 820
SfaNI GCATC 1 cut(s) 682
SinI GGWCC 1 cut(s) 156
SpeI ACTAGT 1 cut(s) 746
Sse9I AATT 7 cut(s) 174, 183, 288, 505, 615, 645, 781
SsiI CCGC 1 cut(s) 48
SspI AATATT 1 cut(s) 315
SspMI CTAG 6 cut(s) 266, 309, 446, 711, 747, 823
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 2 cut(s) 45, 402
TaiI ACGT 1 cut(s) 130
TaqI TCGA 1 cut(s) 513
TasI AATT 7 cut(s) 174, 183, 288, 505, 615, 645, 781
TatI WGTACW 4 cut(s) 3, 115, 749, 803
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 8 cut(s) 131, 215, 228, 280, 346, 491, 563, 578
Tru1I TTAA 1 cut(s) 224
Tru9I TTAA 1 cut(s) 224
TscAI CASTG 1 cut(s) 50
TseFI GTSAC 2 cut(s) 375, 796
Tsp45I GTSAC 2 cut(s) 375, 796
TspDTI ATGAA 6 cut(s) 110, 197, 293, 348, 555, 609
TspRI CASTG 1 cut(s) 50
VpaK11BI GGWCC 1 cut(s) 156
XapI RAATTY 1 cut(s) 505
XceI RCATGY 2 cut(s) 521, 804
XspI CTAG 6 cut(s) 266, 309, 446, 711, 747, 823
ZrmI AGTACT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.