MD09G1059900.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
4058753 .. 4059498
746 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1059900.v1.1.491

Sequence Viewer

Length: 219 bp
ATGCCATGGAGGGGGATATTTTCAATAAAATCTGATGTCTTCAGTTTTGGGGTGTTAATTCTCGAAATCATAAGTGGCAGGAAAAACAACAGCTTCTACAATGATGAGCGTGTGCTAAATTTAGTAGGATATACATGGGAGCTATGGAAAGAAGGCGCAGGGATAGAACTAATGGATCCAACACTAACGGATTCATGTGTTCGGGGATCAATTTCTTAG

Protein Analysis

73

Amino Acids

8.17

Weight (kDa)

4.85

Isoelectric Point (pI)

28.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 170, 183, 214
AcsI RAATTY 1 cut(s) 118
AcuI CTGAAG 1 cut(s) 25
AfiI CCNNNNNNNGG 1 cut(s) 11
AgsI TTSAA 1 cut(s) 24
AluBI AGCT 2 cut(s) 93, 142
AluI AGCT 2 cut(s) 93, 142
AlwI GGATC 3 cut(s) 170, 183, 214
ApoI RAATTY 1 cut(s) 118
AspLEI GCGC 1 cut(s) 158
BamHI GGATCC 1 cut(s) 175
BbsI GAAGAC 1 cut(s) 31
BmiI GGNNCC 1 cut(s) 177
BpiI GAAGAC 1 cut(s) 31
BsaJI CCNNGG 1 cut(s) 5
Bsc4I CCNNNNNNNGG 1 cut(s) 11
BseDI CCNNGG 1 cut(s) 5
BseLI CCNNNNNNNGG 1 cut(s) 11
BslI CCNNNNNNNGG 1 cut(s) 11
Bsp143I GATC 2 cut(s) 175, 206
Bsp19I CCATGG 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 177
BspPI GGATC 3 cut(s) 170, 183, 214
BssECI CCNNGG 1 cut(s) 5
BssMI GATC 2 cut(s) 175, 206
BssT1I CCWWGG 1 cut(s) 5
BstDEI CTNAG 1 cut(s) 216
BstDSI CCRYGG 1 cut(s) 5
BstHHI GCGC 1 cut(s) 158
BstKTI GATC 2 cut(s) 178, 209
BstMBI GATC 2 cut(s) 175, 206
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 1 cut(s) 175
BstYI RGATCY 1 cut(s) 175
BtgI CCRYGG 1 cut(s) 5
CfoI GCGC 1 cut(s) 158
CviAII CATG 3 cut(s) 6, 135, 195
CviJI RGCY 2 cut(s) 93, 142
CviKI_1 RGCY 2 cut(s) 93, 142
DdeI CTNAG 1 cut(s) 216
DpnI GATC 2 cut(s) 177, 208
DpnII GATC 2 cut(s) 175, 206
Eco130I CCWWGG 1 cut(s) 5
Eco57I CTGAAG 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 5
ErhI CCWWGG 1 cut(s) 5
FaeI CATG 3 cut(s) 9, 138, 198
FaiI YATR 6 cut(s) 7, 71, 132, 136, 145, 196
FatI CATG 3 cut(s) 5, 134, 194
GlaI GCGC 1 cut(s) 157
HhaI GCGC 1 cut(s) 158
Hin1II CATG 3 cut(s) 9, 138, 198
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HinfI GANTC 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 34
Hpy188III TCNNGA 1 cut(s) 62
HpyAV CCTTC 1 cut(s) 146
HpyF3I CTNAG 1 cut(s) 216
Hsp92II CATG 3 cut(s) 9, 138, 198
HspAI GCGC 1 cut(s) 156
Kzo9I GATC 2 cut(s) 175, 206
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 2 cut(s) 64, 144
MalI GATC 2 cut(s) 177, 208
MboI GATC 2 cut(s) 175, 206
MboII GAAGA 1 cut(s) 31
MflI RGATCY 1 cut(s) 175
MluCI AATT 3 cut(s) 57, 118, 210
MmeI TCCRAC 1 cut(s) 203
MnlI CCTC 1 cut(s) 3
MseI TTAA 1 cut(s) 56
NcoI CCATGG 1 cut(s) 5
NdeII GATC 2 cut(s) 175, 206
NlaIII CATG 3 cut(s) 9, 138, 198
NlaIV GGNNCC 1 cut(s) 177
PfeI GAWTC 1 cut(s) 191
PspN4I GGNNCC 1 cut(s) 177
PsuI RGATCY 1 cut(s) 175
SaqAI TTAA 1 cut(s) 56
Sau3AI GATC 2 cut(s) 175, 206
SetI ASST 2 cut(s) 95, 144
SgeI CNNG 8 cut(s) 18, 74, 91, 122, 147, 171, 207, 215
Sse9I AATT 3 cut(s) 57, 118, 210
StyI CCWWGG 1 cut(s) 5
TaqI TCGA 1 cut(s) 63
TasI AATT 3 cut(s) 57, 118, 210
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 1 cut(s) 56
Tru9I TTAA 1 cut(s) 56
TspDTI ATGAA 1 cut(s) 183
TspGWI ACGGA 1 cut(s) 203
XapI RAATTY 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.