MD17G1273100.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
33524444 .. 33524785
342 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1273100.v1.1.491

Sequence Viewer

Length: 342 bp
ATGTATGCAATGATATACCAATTTTTACTTCGGAATGTGTGTGCTAAAATGATCCTAATTGCATCAGATTTGGGATATGTGGATGGTCAAGCATTAGGCATAGTTGATCCATCTTTGTATCAGTCATATCCTGCACACGAGGTTTCAAGATGCATTCAGATCGGGCTACTTTGCATGCAAGAAAGTGCATCGGATAGGCCAACCATGTCGGAAGTTATTTTCATGTTGAGTAATGAAACAACTCTTCCCTCTCCCCAGAAACCGGCATTTATATTACAATCCAGAAATCCAAACTCAGCAGCATCGCAAGGAGAAATTTGTTCACTAAATAGTTACCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

114

Amino Acids

12.51

Weight (kDa)

5.15

Isoelectric Point (pI)

59.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 46, 101
AcsI RAATTY 1 cut(s) 315
AfiI CCNNNNNNNGG 1 cut(s) 262
AgsI TTSAA 1 cut(s) 147
AjuI GAANNNNNNNTTGG 2 cut(s) 12, 44
AlwI GGATC 2 cut(s) 46, 101
AoxI GGCC 1 cut(s) 197
ApeKI GCWGC 1 cut(s) 299
ApoI RAATTY 1 cut(s) 315
BauI CACGAG 1 cut(s) 137
BbvI GCAGC 1 cut(s) 311
BccI CCATC 2 cut(s) 77, 118
BcgI CGANNNNNNTGC 2 cut(s) 142, 176
BisI GCNGC 1 cut(s) 300
BlsI GCNGC 1 cut(s) 301
BmsI GCATC 4 cut(s) 71, 140, 197, 311
Bsc4I CCNNNNNNNGG 1 cut(s) 262
Bse118I RCCGGY 1 cut(s) 262
Bse3DI GCAATG 1 cut(s) 15
BseGI GGATG 1 cut(s) 88
BseLI CCNNNNNNNGG 1 cut(s) 262
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 309
BseXI GCAGC 1 cut(s) 311
BsgI GTGCAG 1 cut(s) 117
BshFI GGCC 1 cut(s) 199
BsiSI CCGG 1 cut(s) 263
BslI CCNNNNNNNGG 1 cut(s) 262
BsmI GAATGC 1 cut(s) 153
BsnI GGCC 1 cut(s) 199
Bsp143I GATC 3 cut(s) 51, 106, 159
BspANI GGCC 1 cut(s) 199
BspCNI CTCAG 1 cut(s) 308
BspPI GGATC 2 cut(s) 46, 101
BsrDI GCAATG 1 cut(s) 15
BsrFI RCCGGY 1 cut(s) 262
BssAI RCCGGY 1 cut(s) 262
BssMI GATC 3 cut(s) 51, 106, 159
BssSI CACGAG 1 cut(s) 137
Bst2BI CACGAG 1 cut(s) 137
Bst6I CTCTTC 1 cut(s) 249
BstC8I GCNNGC 1 cut(s) 176
BstDEI CTNAG 1 cut(s) 295
BstF5I GGATG 1 cut(s) 88
BstKTI GATC 3 cut(s) 54, 109, 162
BstMBI GATC 3 cut(s) 51, 106, 159
BstNSI RCATGY 1 cut(s) 178
BstV1I GCAGC 1 cut(s) 311
BsuRI GGCC 1 cut(s) 199
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 1 cut(s) 88
Cac8I GCNNGC 1 cut(s) 176
Cfr10I RCCGGY 1 cut(s) 262
CviAII CATG 3 cut(s) 175, 205, 223
CviJI RGCY 2 cut(s) 166, 199
CviKI_1 RGCY 2 cut(s) 166, 199
DdeI CTNAG 1 cut(s) 295
DpnI GATC 3 cut(s) 53, 108, 161
DpnII GATC 3 cut(s) 51, 106, 159
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
EcoT22I ATGCAT 1 cut(s) 155
FaeI CATG 3 cut(s) 178, 208, 226
FaiI YATR 9 cut(s) 6, 16, 78, 101, 127, 176, 206, 224, 272
FatI CATG 3 cut(s) 174, 204, 222
Fnu4HI GCNGC 1 cut(s) 300
FokI GGATG 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 300
GluI GCNGC 1 cut(s) 300
HaeIII GGCC 1 cut(s) 199
HapII CCGG 1 cut(s) 263
Hin1II CATG 3 cut(s) 178, 208, 226
HpaII CCGG 1 cut(s) 263
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 5 cut(s) 33, 67, 159, 193, 211
Hpy188III TCNNGA 2 cut(s) 147, 282
Hpy8I GTNNAC 1 cut(s) 323
HpyCH4V TGCA 7 cut(s) 8, 62, 134, 153, 174, 178, 188
HpyF3I CTNAG 1 cut(s) 295
Hsp92II CATG 3 cut(s) 178, 208, 226
Kzo9I GATC 3 cut(s) 51, 106, 159
LpnPI CCDG 4 cut(s) 144, 269, 276, 295
Lsp1109I GCAGC 1 cut(s) 311
LweI GCATC 4 cut(s) 71, 140, 197, 311
MaeIII GTNAC 1 cut(s) 332
MalI GATC 3 cut(s) 53, 108, 161
MboI GATC 3 cut(s) 51, 106, 159
MboII GAAGA 1 cut(s) 236
MluCI AATT 3 cut(s) 20, 57, 315
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 2 cut(s) 133, 259
Mph1103I ATGCAT 1 cut(s) 155
MspI CCGG 1 cut(s) 263
Mva1269I GAATGC 1 cut(s) 153
NdeII GATC 3 cut(s) 51, 106, 159
NlaIII CATG 3 cut(s) 178, 208, 226
NsiI ATGCAT 1 cut(s) 155
NspI RCATGY 1 cut(s) 178
PaeI GCATGC 1 cut(s) 178
PctI GAATGC 1 cut(s) 153
PkrI GCNGC 1 cut(s) 301
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 3 cut(s) 51, 106, 159
SetI ASST 1 cut(s) 144
SfaNI GCATC 4 cut(s) 71, 140, 197, 311
SphI GCATGC 1 cut(s) 178
Sse9I AATT 3 cut(s) 20, 57, 315
TasI AATT 3 cut(s) 20, 57, 315
TseI GCWGC 1 cut(s) 299
TspDTI ATGAA 2 cut(s) 211, 249
XapI RAATTY 1 cut(s) 315
XceI RCATGY 1 cut(s) 178
Zsp2I ATGCAT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.