Rorug01G0307900

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
42469743 .. 42474727
4985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0307900.1

Sequence Viewer

Length: 2529 bp
ATGAAAACGACGTCGCTTTCGTCCACTATTATGCCCGTTAAGCTCCTCCTCAACAACCCTTCTCTCCCAGTAACCCGCTTCCTCTCCATGAAATTCGGACCCTCCATTTCCGCTCCTCGACCCGTACCCGCTTTCTCCCGGGTCTTCCCGCTCCGCCTCAGGTACCTCGCCCTCGGCTCCCACCGCACGTTCTCCACCCGCGCCTTCCGGACCCCACGAACCGGGTCGGGCTCCCAATTCTCGCGCGGCTACGAGCGGAAGGCGGCGGTCGGGGGATCCAAGAGCCTGGTCGACGACGAGGCGGAGCTGAGTGACTGGGTCAGCGAGTTGAGGACCGACCCGACCCGCGGTGGCCGGGGAGAGGAATCGGACGGTGGTGGTCGGAGAGGTAGTAGGGTTAGAGATAGGGGCGGCGATAGAGAGCCGTATCCGGCGAAGCGGAGCAGGAGAGATAGCGGCGCCGACGAGTTTGGTGAGTCGAGAACTCGGGGAGGGTTTCGGAATCCGAGTCGGTCGTTTCCGGGAAGTTCTCGGATGAGTAAAAGGGATGATGATGACAGAGAAGGTAGGTCGTTTCCGGCGAGAAGCAGTTCGAGCTCGAATGACCGGTTTGGTGAGTCGAATCGGAGACGATTTCCGAGCTCGAATCCGTCGGCATTTACTAGAAATCCACGGATGGATAGAAGGTTTGATAACAAATTCGGGGACAATGCTGTGAAGAAGGAAGATGAGCTTCCGGGGAGGAGAGGTCCGAATTTCAGAGGGAATTCGAATGCGAGTTCGAGTTCTTTGAGTAAGAGAGGAGGGAGAGAGGTGGATTCGGGTTTCAGACGAGGCGGCGAGGGGTTGAGGAAGGGTGGGAGAGATTCGAGGAAGGAAAAGGAAATGCTTGTGGTGGATGATAGTGATGAGGATGAGGAGGTGAATGAGCTTGGTGTTGGTATTGGGGATTTGCTTACCGAGGAAGATAGTGATAGTGCTGCTGCGGATGAGGATGATGAGTATGAAGGATTGAAAAATAAGAGTGCAGCTGCATTGTTTGGTTCGGATAAGGAAGTGGTGACTCAGAAGGCTGTGCCGAAAAGTTCAGCGGGAGACTCTGACTCTTATTTGAGCGAGTCAAGGTTTGATCAGTGTTCGGTCTCACCACTGTCCTTGAAGGGAATCAAGGATGCAGGATATGAGAACATGACTGTGGTACAAGAGGCTACTCTTCCCATCATACTCAAAGGCAAGGATGTTCTAGCCAAGGCTAAAACCGGAACTGGAAAAACTGTTGCATTCCTGCTTCCATCAATTGAAGTTGTTGTAAACTCACCTCCTATTGGACGCGATCATAAGAGACCCCCAATTTCTGTACTTGTAATATGCCCAACCCGAGAGCTGGCGAGTCAAGCTGCAGCAGAAGCCAATAAATTGTTGAAGTATCATCCTTCTATTGGTGTTCAAGTTGTGATAGGAGGTACAAGACTTGCTCTAGAACAGAAACGCATGCAAGCAAACCCTTGCCAGATTCTTGTCGCTACACCGGGAAGGCTCAAAGATCACATTGAGAATACCGCAGGTTTCGCAACTAGGCTGATGGGTGTCAAAGTCCTCATTCTTGATGAAGCTGATCATCTACTGGATATGGGGTTCCGTAAAGACATTGAAAGGATTATAGCAGCTGTTCCAAAACAGCGACAGACACTACTGTTCTCTGCCACCGTTCCAGAAGAGGTCCGTCAAATCTGTCACATCGCTTTGAAAAGAGATCATGAATTTATTAACACGGTTCAGGAAGGCAGTGAAGAGACACATGCGCAGGTCAGACAAACCCATTTGGTTGCTCCTTTGGACAAACACTTTTCCTTTGTATATAGTCTTCTTAAAGAGCACATTGCTGACGATCCTGACTATAAGGTTCTCGTATTCTGCACTACTGCAATGGTCACACGACTGGTCGCTGACCTTCTTGGTGAGCTGAACTTGAATGTTAGAGAAATCCACTCCAGAAAGCCACAGAGTTATAGAACTAGGGTTTCCGATGAATTTCGGAAATCAAAGGGTCTTATCCTTGTGACTTCTGATGTATCCGCACGAGGGGTTGATTATCCAGATGTTACTCTAGTCATACAGGTGGGCATTCCAGCTGATAGACAACAGTATATTCACCGACTTGGTAGAACTGGCCGTAAAGGCAAAGAAGGGCAAGGAATATTGCTACTGGCTCCTTGGGAGGAATTTTTCTTATCCACTATTAAAGATTTGCCAATGACCAAGGCTCCTGTACCTTTAGTTGATCCAGATACGACCAAGAAGGTAGCACGAGCTCTATCCCAAGTGGACATGAAGAACAAAGAAGCAGCATACCAAGCGTGGCTGGGGTATTACAATTCTAATAAGAAAATAGGGCGTGATAAGCATAGGCTTGTGGAGCTTGTGAATGAGTTTAGCCGAAGCATGGGATTGGACAACCCTCCAGCCATTGCCAAGCTTGTTCTTGGTAAAATGGGTCTTAAGAATGTCCCTGGACTGCGTTCCAAATAA

Protein Analysis

842

Amino Acids

93.02

Weight (kDa)

9.56

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 399 - 576 1.9e-45 DEAD/DEAH box helicase
ResIII PF04851 410 - 571 9.1e-08 Type III restriction enzyme, res subunit
Helicase_C PF00271 622 - 727 3e-22 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 14
Acc16I TGCGCA 1 cut(s) 1803
Acc36I ACCTGC 2 cut(s) 1553, 1795
Acc65I GGTACC 1 cut(s) 162
AccB1I GGYRCC 2 cut(s) 162, 458
AccBSI CCGCTC 3 cut(s) 113, 151, 256
AccI GTMKAC 1 cut(s) 291
AccII CGCG 5 cut(s) 201, 244, 246, 348, 1332
AccIII TCCGGA 1 cut(s) 207
AclWI GGATC 4 cut(s) 270, 283, 1883, 2276
AcoI YGGCCR 2 cut(s) 352, 2170
AcsI RAATTY 7 cut(s) 92, 698, 754, 766, 1760, 2030, 2222
AcyI GRCGYC 2 cut(s) 11, 459
AfaI GTAC 6 cut(s) 126, 164, 1200, 1359, 1465, 2271
AfiI CCNNNNNNNGG 8 cut(s) 221, 347, 361, 1325, 1384, 1439, 2082, 2443
AflII CTTAAG 1 cut(s) 2498
AgeI ACCGGT 1 cut(s) 606
AgsI TTSAA 8 cut(s) 1015, 1159, 1301, 1423, 1448, 1652, 1747, 1972
AjnI CCWGG 2 cut(s) 285, 2509
AloI GAACNNNNNNTCC 2 cut(s) 1619, 1651
Alw21I GWGCWC 4 cut(s) 599, 644, 1878, 2314
Alw26I GTCTC 5 cut(s) 622, 1089, 1147, 1336, 1787
AlwI GGATC 4 cut(s) 270, 283, 1883, 2276
Ama87I CYCGRG 3 cut(s) 138, 486, 1377
Aor13HI TCCGGA 1 cut(s) 207
AoxI GGCC 2 cut(s) 352, 2170
ApeKI GCWGC 8 cut(s) 980, 983, 1028, 1031, 1397, 1400, 1664, 2345
ApoI RAATTY 7 cut(s) 92, 698, 754, 766, 1760, 2030, 2222
ArsI GACNNNNNNTTYG 1 cut(s) 33
AsiGI ACCGGT 1 cut(s) 606
Asp700I GAANNNNTTC 1 cut(s) 589
Asp718I GGTACC 1 cut(s) 162
AspLEI GCGC 4 cut(s) 203, 246, 461, 1804
AspS9I GGNCC 5 cut(s) 98, 210, 333, 749, 1720
AsuC2I CCSGG 7 cut(s) 139, 140, 223, 356, 522, 738, 1530
AsuHPI GGTGA 8 cut(s) 485, 626, 934, 1072, 1137, 1308, 1970, 2144
AsuII TTCGAA 1 cut(s) 770
AvaI CYCGRG 3 cut(s) 138, 486, 1377
AvaII GGWCC 5 cut(s) 98, 210, 333, 749, 1720
AxyI CCTNAGG 1 cut(s) 158
BamHI GGATCC 1 cut(s) 275
BanI GGYRCC 2 cut(s) 162, 458
BanII GRGCYC 4 cut(s) 233, 599, 644, 2314
BarI GAAGNNNNNNTAC 2 cut(s) 1848, 1880
BauI CACGAG 2 cut(s) 2079, 2307
BbsI GAAGAC 2 cut(s) 136, 1856
Bbv12I GWGCWC 4 cut(s) 599, 644, 1878, 2314
BbvI GCAGC 8 cut(s) 967, 970, 1018, 1040, 1384, 1412, 1676, 2357
BccI CCATC 4 cut(s) 670, 1226, 1300, 1576
BceAI ACGGC 2 cut(s) 409, 2157
BciT130I CCWGG 2 cut(s) 287, 2511
BciVI GTATCC 2 cut(s) 438, 2083
BclI TGATCA 2 cut(s) 1129, 1615
BcnI CCSGG 7 cut(s) 139, 140, 223, 356, 522, 738, 1530
BcoDI GTCTC 5 cut(s) 622, 1089, 1147, 1336, 1787
BfaI CTAG 6 cut(s) 663, 1244, 1478, 1575, 2016, 2108
BfmI CTRYAG 1 cut(s) 1398
BfoI RGCGCY 1 cut(s) 462
BfrI CTTAAG 1 cut(s) 2498
BfuAI ACCTGC 2 cut(s) 1553, 1795
BfuI GTATCC 2 cut(s) 438, 2083
BglI GCCNNNNNGGC 1 cut(s) 2178
Bme1390I CCNGG 9 cut(s) 139, 140, 223, 287, 356, 522, 738, 1530, 2511
Bme18I GGWCC 5 cut(s) 98, 210, 333, 749, 1720
BmeT110I CYCGRG 3 cut(s) 138, 486, 1377
BmgT120I GGNCC 5 cut(s) 98, 210, 333, 749, 1720
BmrFI CCNGG 9 cut(s) 139, 140, 223, 287, 356, 522, 738, 1530, 2511
BmrI ACTGGG 2 cut(s) 62, 325
BmsI GCATC 1 cut(s) 1162
BmuI ACTGGG 2 cut(s) 62, 325
BpiI GAAGAC 2 cut(s) 136, 1856
BpmI CTGGAG 2 cut(s) 1975, 2445
Bpu14I TTCGAA 1 cut(s) 770
BpuMI CCSGG 7 cut(s) 139, 140, 223, 356, 522, 738, 1530
BsaHI GRCGYC 2 cut(s) 11, 459
BsaI GGTCTC 2 cut(s) 1147, 1336
BsaWI WCCGGW 3 cut(s) 207, 606, 1259
BsaXI ACNNNNNCTCC 6 cut(s) 376, 406, 733, 763, 2248, 2278
Bsc4I CCNNNNNNNGG 8 cut(s) 221, 347, 361, 1325, 1384, 1439, 2082, 2443
Bse118I RCCGGY 1 cut(s) 606
Bse1I ACTGG 7 cut(s) 68, 320, 1270, 1629, 1944, 2173, 2211
Bse21I CCTNAGG 1 cut(s) 158
Bse3DI GCAATG 3 cut(s) 1878, 1932, 2466
BseAI TCCGGA 1 cut(s) 207
BseBI CCWGG 2 cut(s) 287, 2511
BseLI CCNNNNNNNGG 8 cut(s) 221, 347, 361, 1325, 1384, 1439, 2082, 2443
BseMI GCAATG 3 cut(s) 1878, 1932, 2466
BseMII CTCAG 3 cut(s) 172, 299, 1079
BseNI ACTGG 7 cut(s) 68, 320, 1270, 1629, 1944, 2173, 2211
BseRI GAGGAG 6 cut(s) 35, 38, 105, 757, 816, 932
BseXI GCAGC 8 cut(s) 967, 970, 1018, 1040, 1384, 1412, 1676, 2357
BseYI CCCAGC 1 cut(s) 2362
BsgI GTGCAG 2 cut(s) 1047, 1900
Bsh1236I CGCG 5 cut(s) 201, 244, 246, 348, 1332
Bsh1285I CGRYCG 2 cut(s) 270, 515
BshFI GGCC 2 cut(s) 354, 2172
BshNI GGYRCC 2 cut(s) 162, 458
BshTI ACCGGT 1 cut(s) 606
BsiEI CGRYCG 2 cut(s) 270, 515
BsiHKAI GWGCWC 4 cut(s) 599, 644, 1878, 2314
BsiHKCI CYCGRG 3 cut(s) 138, 486, 1377
BslFI GGGAC 2 cut(s) 719, 2492
BslI CCNNNNNNNGG 8 cut(s) 221, 347, 361, 1325, 1384, 1439, 2082, 2443
BsmAI GTCTC 5 cut(s) 622, 1089, 1147, 1336, 1787
BsmBI CGTCTC 1 cut(s) 622
BsmFI GGGAC 2 cut(s) 719, 2492
BsmI GAATGC 3 cut(s) 778, 1280, 2124
BsnI GGCC 2 cut(s) 354, 2172
Bso31I GGTCTC 2 cut(s) 1147, 1336
BsoBI CYCGRG 3 cut(s) 138, 486, 1377
Bsp119I TTCGAA 1 cut(s) 770
Bsp1286I GDGCHC 5 cut(s) 233, 599, 644, 1878, 2314
Bsp13I TCCGGA 1 cut(s) 207
Bsp143I GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
BspANI GGCC 2 cut(s) 354, 2172
BspCNI CTCAG 3 cut(s) 171, 300, 1078
BspEI TCCGGA 1 cut(s) 207
BspFNI CGCG 5 cut(s) 201, 244, 246, 348, 1332
BspHI TCATGA 1 cut(s) 1756
BspMAI CTGCAG 1 cut(s) 1402
BspMI ACCTGC 2 cut(s) 1553, 1795
BspPI GGATC 4 cut(s) 270, 283, 1883, 2276
BspT104I TTCGAA 1 cut(s) 770
BspT107I GGYRCC 2 cut(s) 162, 458
BspTI CTTAAG 1 cut(s) 2498
BspTNI GGTCTC 2 cut(s) 1147, 1336
BsrBI CCGCTC 3 cut(s) 113, 151, 256
BsrDI GCAATG 3 cut(s) 1878, 1932, 2466
BsrFI RCCGGY 1 cut(s) 606
BsrI ACTGG 7 cut(s) 68, 320, 1270, 1629, 1944, 2173, 2211
BssAI RCCGGY 1 cut(s) 606
BssMI GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
BssNI GRCGYC 2 cut(s) 11, 459
BssSI CACGAG 2 cut(s) 2079, 2307
BssT1I CCWWGG 3 cut(s) 1248, 2213, 2259
Bst2BI CACGAG 2 cut(s) 2079, 2307
Bst2UI CCWGG 2 cut(s) 287, 2511
Bst4CI ACNGT 8 cut(s) 374, 1152, 1195, 1276, 1695, 1708, 1774, 2145
Bst6I CTCTTC 3 cut(s) 1218, 1710, 1785
BstACI GRCGYC 2 cut(s) 11, 459
BstAFI CTTAAG 1 cut(s) 2498
BstBI TTCGAA 1 cut(s) 770
BstC8I GCNNGC 3 cut(s) 1386, 1493, 1497
BstDEI CTNAG 3 cut(s) 158, 308, 1065
BstDSI CCRYGG 2 cut(s) 346, 671
BstFNI CGCG 5 cut(s) 201, 244, 246, 348, 1332
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 4 cut(s) 203, 246, 461, 1804
BstKTI GATC 8 cut(s) 278, 1132, 1336, 1546, 1618, 1756, 1891, 2284
BstMAI GTCTC 5 cut(s) 622, 1089, 1147, 1336, 1787
BstMBI GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
BstMCI CGRYCG 2 cut(s) 270, 515
BstNI CCWGG 2 cut(s) 287, 2511
BstNSI RCATGY 2 cut(s) 1495, 1802
BstSCI CCNGG 9 cut(s) 137, 138, 221, 285, 354, 520, 736, 1528, 2509
BstSFI CTRYAG 1 cut(s) 1398
BstUI CGCG 5 cut(s) 201, 244, 246, 348, 1332
BstV1I GCAGC 8 cut(s) 967, 970, 1018, 1040, 1384, 1412, 1676, 2357
BstV2I GAAGAC 2 cut(s) 136, 1856
BstX2I RGATCY 1 cut(s) 275
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 1 cut(s) 275
Bsu36I CCTNAGG 1 cut(s) 158
BsuI GTATCC 2 cut(s) 438, 2083
BsuRI GGCC 2 cut(s) 354, 2172
BtgI CCRYGG 2 cut(s) 346, 671
BtgZI GCGATG 1 cut(s) 1723
BtsI GCAGTG 1 cut(s) 1792
BtsIMutI CAGTG 3 cut(s) 1139, 1148, 1792
BveI ACCTGC 2 cut(s) 1553, 1795
Cac8I GCNNGC 3 cut(s) 1386, 1493, 1497
CciI TCATGA 1 cut(s) 1756
CfoI GCGC 4 cut(s) 203, 246, 461, 1804
Cfr10I RCCGGY 1 cut(s) 606
Cfr13I GGNCC 5 cut(s) 98, 210, 333, 749, 1720
Cfr42I CCGCGG 1 cut(s) 349
Cfr9I CCCGGG 1 cut(s) 138
CseI GACGC 1 cut(s) 1338
Csp6I GTAC 6 cut(s) 125, 163, 1199, 1358, 1464, 2270
CspAI ACCGGT 1 cut(s) 606
CspCI CAANNNNNGTGG 2 cut(s) 1137, 1172
CviAII CATG 7 cut(s) 88, 1189, 1492, 1757, 1799, 2329, 2443
CviQI GTAC 6 cut(s) 125, 163, 1199, 1358, 1464, 2270
DdeI CTNAG 3 cut(s) 158, 308, 1065
DinI GGCGCC 1 cut(s) 460
DpnI GATC 8 cut(s) 277, 1131, 1335, 1545, 1617, 1755, 1890, 2283
DpnII GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
EaeI YGGCCR 2 cut(s) 352, 2170
Eam1104I CTCTTC 3 cut(s) 1218, 1710, 1785
EarI CTCTTC 3 cut(s) 1218, 1710, 1785
EciI GGCGGA 2 cut(s) 143, 317
Ecl136II GAGCTC 3 cut(s) 597, 642, 2312
Eco130I CCWWGG 3 cut(s) 1248, 2213, 2259
Eco24I GRGCYC 4 cut(s) 233, 599, 644, 2314
Eco31I GGTCTC 2 cut(s) 1147, 1336
Eco47I GGWCC 5 cut(s) 98, 210, 333, 749, 1720
Eco53kI GAGCTC 3 cut(s) 597, 642, 2312
Eco81I CCTNAGG 1 cut(s) 158
Eco88I CYCGRG 3 cut(s) 138, 486, 1377
EcoICRI GAGCTC 3 cut(s) 597, 642, 2312
EcoRI GAATTC 1 cut(s) 766
EcoRII CCWGG 2 cut(s) 285, 2509
EcoT14I CCWWGG 3 cut(s) 1248, 2213, 2259
EcoT38I GRGCYC 4 cut(s) 233, 599, 644, 2314
EgeI GGCGCC 1 cut(s) 460
EheI GGCGCC 1 cut(s) 460
ErhI CCWWGG 3 cut(s) 1248, 2213, 2259
Esp3I CGTCTC 1 cut(s) 622
FaeI CATG 7 cut(s) 91, 1192, 1495, 1760, 1802, 2332, 2446
FalI AAGNNNNNCTT 2 cut(s) 717, 749
FaqI GGGAC 2 cut(s) 719, 2492
FatI CATG 7 cut(s) 87, 1188, 1491, 1756, 1798, 2328, 2442
FauI CCCGC 6 cut(s) 83, 136, 156, 206, 353, 1084
FbaI TGATCA 2 cut(s) 1129, 1615
FblI GTMKAC 1 cut(s) 291
FriOI GRGCYC 4 cut(s) 233, 599, 644, 2314
FspBI CTAG 6 cut(s) 663, 1244, 1478, 1575, 2016, 2108
FspI TGCGCA 1 cut(s) 1803
GlaI GCGC 4 cut(s) 202, 245, 460, 1803
GsaI CCCAGC 1 cut(s) 2366
GsuI CTGGAG 2 cut(s) 1975, 2445
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 2 cut(s) 354, 2172
HgaI GACGC 1 cut(s) 1338
HhaI GCGC 4 cut(s) 203, 246, 461, 1804
Hin1I GRCGYC 2 cut(s) 11, 459
Hin1II CATG 7 cut(s) 91, 1192, 1495, 1760, 1802, 2332, 2446
Hin6I GCGC 4 cut(s) 201, 244, 459, 1802
HinP1I GCGC 4 cut(s) 201, 244, 459, 1802
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HindIII AAGCTT 1 cut(s) 2474
HphI GGTGA 8 cut(s) 485, 626, 934, 1072, 1137, 1308, 1970, 2144
Hpy166II GTNNAC 4 cut(s) 24, 292, 1312, 2326
Hpy8I GTNNAC 4 cut(s) 24, 292, 1312, 2326
Hpy99I CGWCG 6 cut(s) 13, 16, 296, 299, 467, 655
HpyCH4III ACNGT 8 cut(s) 374, 1152, 1195, 1276, 1695, 1708, 1774, 2145
HpyCH4IV ACGT 2 cut(s) 11, 188
HpyCH4V TGCA 8 cut(s) 1028, 1034, 1175, 1280, 1400, 1495, 1917, 1925
HpyF3I CTNAG 3 cut(s) 158, 308, 1065
HpySE526I ACGT 2 cut(s) 11, 188
Hsp92I GRCGYC 2 cut(s) 11, 459
Hsp92II CATG 7 cut(s) 91, 1192, 1495, 1760, 1802, 2332, 2446
HspAI GCGC 4 cut(s) 201, 244, 459, 1802
KasI GGCGCC 1 cut(s) 458
Kpn2I TCCGGA 1 cut(s) 207
KpnI GGTACC 1 cut(s) 166
Ksp22I TGATCA 2 cut(s) 1129, 1615
KspI CCGCGG 1 cut(s) 349
Kzo9I GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
Lsp1109I GCAGC 8 cut(s) 967, 970, 1018, 1040, 1384, 1412, 1676, 2357
LweI GCATC 1 cut(s) 1162
MaeI CTAG 6 cut(s) 663, 1244, 1478, 1575, 2016, 2108
MaeII ACGT 2 cut(s) 11, 188
MaeIII GTNAC 7 cut(s) 70, 311, 1060, 1733, 1930, 2059, 2101
MalI GATC 8 cut(s) 277, 1131, 1335, 1545, 1617, 1755, 1890, 2283
MbiI CCGCTC 3 cut(s) 113, 151, 256
MboI GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
MboII GAAGA 9 cut(s) 136, 730, 737, 977, 1205, 1727, 1802, 1856, 2344
MfeI CAATTG 1 cut(s) 1296
MflI RGATCY 1 cut(s) 275
MhlI GDGCHC 5 cut(s) 233, 599, 644, 1878, 2314
Mly113I GGCGCC 1 cut(s) 459
MlyI GAGTC 8 cut(s) 485, 517, 626, 1057, 1091, 1097, 1127, 1399
MmeI TCCRAC 1 cut(s) 362
MroI TCCGGA 1 cut(s) 207
MroXI GAANNNNTTC 1 cut(s) 589
MseI TTAA 5 cut(s) 39, 1767, 1869, 2241, 2499
MslI CAYNNNNRTG 3 cut(s) 29, 1193, 2117
MspA1I CMGCKG 5 cut(s) 348, 1031, 1091, 1667, 2132
MspCI CTTAAG 1 cut(s) 2498
MspR9I CCNGG 9 cut(s) 139, 140, 223, 287, 356, 522, 738, 1530, 2511
MunI CAATTG 1 cut(s) 1296
Mva1269I GAATGC 3 cut(s) 778, 1280, 2124
MvaI CCWGG 2 cut(s) 287, 2511
MvnI CGCG 5 cut(s) 201, 244, 246, 348, 1332
NarI GGCGCC 1 cut(s) 459
NciI CCSGG 7 cut(s) 139, 140, 223, 356, 522, 738, 1530
NdeII GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
NlaIII CATG 7 cut(s) 91, 1192, 1495, 1760, 1802, 2332, 2446
NmeAIII GCCGAG 1 cut(s) 153
NmuCI GTSAC 5 cut(s) 311, 1060, 1733, 1930, 2059
NsbI TGCGCA 1 cut(s) 1803
NspI RCATGY 2 cut(s) 1495, 1802
NspV TTCGAA 1 cut(s) 770
PaeI GCATGC 1 cut(s) 1495
PagI TCATGA 1 cut(s) 1756
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 578
PctI GAATGC 3 cut(s) 778, 1280, 2124
PdmI GAANNNNTTC 1 cut(s) 589
PfeI GAWTC 8 cut(s) 365, 502, 622, 646, 818, 866, 1164, 1513
PflFI GACNNNGTC 1 cut(s) 317
PfoI TCCNGGA 1 cut(s) 520
PinAI ACCGGT 1 cut(s) 606
PleI GAGTC 8 cut(s) 484, 516, 625, 1057, 1091, 1097, 1126, 1398
PluTI GGCGCC 1 cut(s) 462
PpsI GAGTC 8 cut(s) 484, 516, 625, 1057, 1091, 1097, 1126, 1398
Psp124BI GAGCTC 3 cut(s) 599, 644, 2314
Psp6I CCWGG 2 cut(s) 285, 2509
PspFI CCCAGC 1 cut(s) 2362
PspGI CCWGG 2 cut(s) 285, 2509
PspPI GGNCC 5 cut(s) 98, 210, 333, 749, 1720
PstI CTGCAG 1 cut(s) 1402
PsuI RGATCY 1 cut(s) 275
PsyI GACNNNGTC 1 cut(s) 317
PvuII CAGCTG 3 cut(s) 1031, 1667, 2132
RsaI GTAC 6 cut(s) 126, 164, 1200, 1359, 1465, 2271
RsaNI GTAC 6 cut(s) 125, 163, 1199, 1358, 1464, 2270
RseI CAYNNNNRTG 3 cut(s) 29, 1193, 2117
SacI GAGCTC 3 cut(s) 599, 644, 2314
SacII CCGCGG 1 cut(s) 349
SalI GTCGAC 1 cut(s) 290
SaqAI TTAA 5 cut(s) 39, 1767, 1869, 2241, 2499
Sau3AI GATC 8 cut(s) 275, 1129, 1333, 1543, 1615, 1753, 1888, 2281
Sau96I GGNCC 5 cut(s) 98, 210, 333, 749, 1720
SchI GAGTC 8 cut(s) 485, 517, 626, 1057, 1091, 1097, 1127, 1399
ScrFI CCNGG 9 cut(s) 139, 140, 223, 287, 356, 522, 738, 1530, 2511
SduI GDGCHC 5 cut(s) 233, 599, 644, 1878, 2314
SfaNI GCATC 1 cut(s) 1162
SfcI CTRYAG 1 cut(s) 1398
SfoI GGCGCC 1 cut(s) 460
Sfr303I CCGCGG 1 cut(s) 349
SfuI TTCGAA 1 cut(s) 770
SgrBI CCGCGG 1 cut(s) 349
SinI GGWCC 5 cut(s) 98, 210, 333, 749, 1720
SmaI CCCGGG 1 cut(s) 140
SmiMI CAYNNNNRTG 3 cut(s) 29, 1193, 2117
SmlI CTYRAG 1 cut(s) 2498
SmoI CTYRAG 1 cut(s) 2498
SphI GCATGC 1 cut(s) 1495
SspDI GGCGCC 1 cut(s) 458
SspI AATATT 1 cut(s) 2199
SspMI CTAG 6 cut(s) 663, 1244, 1478, 1575, 2016, 2108
SstI GAGCTC 3 cut(s) 599, 644, 2314
StyD4I CCNGG 9 cut(s) 137, 138, 221, 285, 354, 520, 736, 1528, 2509
StyI CCWWGG 3 cut(s) 1248, 2213, 2259
TaaI ACNGT 8 cut(s) 374, 1152, 1195, 1276, 1695, 1708, 1774, 2145
TaiI ACGT 2 cut(s) 14, 191
TaqII GACCGA 3 cut(s) 350, 501, 1129
TatI WGTACW 1 cut(s) 1357
TauI GCSGC 5 cut(s) 249, 266, 414, 459, 840
TfiI GAWTC 8 cut(s) 365, 502, 622, 646, 818, 866, 1164, 1513
Tru1I TTAA 5 cut(s) 39, 1767, 1869, 2241, 2499
Tru9I TTAA 5 cut(s) 39, 1767, 1869, 2241, 2499
TscAI CASTG 3 cut(s) 1139, 1155, 1792
TseFI GTSAC 5 cut(s) 311, 1060, 1733, 1930, 2059
TseI GCWGC 8 cut(s) 980, 983, 1028, 1031, 1397, 1400, 1664, 2345
Tsp45I GTSAC 5 cut(s) 311, 1060, 1733, 1930, 2059
TspDTI ATGAA 7 cut(s) 17, 104, 1020, 1623, 1773, 2043, 2345
TspGWI ACGGA 4 cut(s) 639, 688, 1628, 1712
TspMI CCCGGG 1 cut(s) 138
TspRI CASTG 3 cut(s) 1139, 1155, 1792
Tth111I GACNNNGTC 1 cut(s) 317
Vha464I CTTAAG 1 cut(s) 2498
VpaK11BI GGWCC 5 cut(s) 98, 210, 333, 749, 1720
XapI RAATTY 7 cut(s) 92, 698, 754, 766, 1760, 2030, 2222
XbaI TCTAGA 1 cut(s) 1477
XceI RCATGY 2 cut(s) 1495, 1802
XmaI CCCGGG 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 291
XmnI GAANNNNTTC 1 cut(s) 589
XspI CTAG 6 cut(s) 663, 1244, 1478, 1575, 2016, 2108
ZraI GACGTC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.