Rroxscaffold_1G00044220

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000201
Physical Location & Seq
Reverse (-)
62996052 .. 62999478
3427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044220.1

Sequence Viewer

Length: 1785 bp
ATGGGCATTCTTTCATTCATTTTCATTGGAGTTTACTTGTTAAAAATCTCAGCTTTAGCTCAATCCACTTCCAGCCATGGCGGCTATGAATTGGGTTTCTTGAGTAGACCAAAGGGTGTTCATAGGAGGAGTCTTTTGGCCTCGACTTCTGGAGACTATTGTGACAATAATGACCTTTGTGGCCCGAATGGAATGTGTGTCATTACCAATTCACCGGTCTGTACTTGTTTAAATGGGTTTGAACCCAAGGCACCAGAAAAATATAACTATGGGGACAACTCAGGTGGTTGTGTCCGGGCTCAACCTTCCAACTGCCAAAACAAGGATGATCGGTTTGAGATATATGCTGGGGTCAGATTGCCAGATACCACAGATTCTCGGGCTAACCAGAGTATGAGTGTCGAGGACTGCAGGGCAAATTGCTTGAACAACTGTTCTTGTGTGGCTTATGCAAGCTCTAATGTCAATGGCTGCACTATCTGGTTTGGTGATTTAAACAACATTAGGAAGCTTTCAGATGGTGGGGAGGATCTGAACGTTCGAATACCTGCTTCAGAATTAAAGAAAAACCACTCACCTAAGACAAAGATAGCGGTGATCGTTGCATCTGTTGTTGCGGTTGTCATTGGGATGCTCTTGGTTGCTTGTTGCATTCACAGGAGGAGAACAAAGTTCAAAGAGAAAATGGGAAAGAATGGAATGACGAATCAGAACAATGACGGACAGAACGAAGACATCGAGCTACCAATATTTAGTTTGTCCACAATAGTCACAGCCACTGATAACTTTTCATTCAACACGAAAGTTGGAGAAGGTGGCTTTGGGACTGTATACAAGGGTAGTCTAGTGGATGGGCAAGAAATTGCTGTGAAGAGACTCTCACGAAGTTCAGGGCAAGGACCAACTGAGTTCAAAAATGAAGTACTACTAATAGCCAAACTTCAGCACCGAAATCTTGTAAGGCTCCTAGGTTGTTGCATTGAGGGAGAAGAGAGATTGTTGATTTATGAATACATGCCCAACAACAGCTTGGACTTCTACCTTTTTGACGAAAATCGAGCAAGACTATTGTCTTGGCCTCAACGCTTTCACATTATCTGTGGGATAGCCAGAGGTCTTCTTTACCTACATCAAGATTCCAGATTGCGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTGCTTGATAAGGAGATGAACCCAAAAATCTCAGACTTCGGCATGGCTAGAACATTTGGAGGAGATCAGACTGAAGGAGTTACAAGAAGAGTTGTTGGAACCTATGGTTATATGGCACCAGAATATGCAATTGATGGTCAATTCTCTGTAAAATCCGATGTTTTTAGTTTTGGCATTTTATTGTTGGAAACATTAAGCGGGAAGAGAAGTAGAGGATTTCATGATCCTGTTGATAACCTTAACCTCATTGGACATGCATGGCGATTGTGGAAAGAAGGAAGATCCTCTGAGTTGATTGATGAATGCTTAAGGGACTCCTGCAGTCTGTCAGAAGTCTTGTGTTGCTTCCATATTAGTCTTTTATGTGTGCAAGAGCTTCCTGAGGACAGGCCAAATATTTCAACCGTGATTCTCATGTTAGGTGGTGGTTCTGCCTTGCCTCTGCCCAAAAAACCAGGTTTTTTTGGTAGAAGTTCATCTGCAGCAGATTCTTCTTCATGTAAGAATGCAACAACATCTTCAACTAACGATGAAACATCTTCAAGTAAGAATTATACATATTCAAACTATGACTCTACAATAACAGTATTGGAGGGTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

594

Amino Acids

65.38

Weight (kDa)

7.42

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 47 - 83 7.3e-08 S-locus glycoprotein domain
PAN_2 PF08276 105 - 168 7.9e-17 PAN-like domain
PK_Tyr_Ser-Thr PF07714 264 - 531 2e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 264 - 463 3.9e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 556
AccB1I GGYRCC 2 cut(s) 250, 1297
AccI GTMKAC 2 cut(s) 106, 831
AciI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
AclI AACGTT 1 cut(s) 537
AclWI GGATC 3 cut(s) 537, 1400, 1458
AcuI CTGAAG 3 cut(s) 537, 926, 1275
AfaI GTAC 2 cut(s) 223, 924
AfiI CCNNNNNNNGG 2 cut(s) 322, 1146
AflII CTTAAG 1 cut(s) 1489
AgeI ACCGGT 1 cut(s) 214
AgsI TTSAA 9 cut(s) 242, 427, 676, 796, 913, 1584, 1704, 1725, 1746
AjnI CCWGG 1 cut(s) 1636
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AluBI AGCT 7 cut(s) 53, 59, 456, 511, 742, 1029, 1558
AluI AGCT 7 cut(s) 53, 59, 456, 511, 742, 1029, 1558
Alw26I GTCTC 2 cut(s) 147, 868
AlwI GGATC 3 cut(s) 537, 1400, 1458
AlwNI CAGNNNCTG 1 cut(s) 779
Ama87I CYCGRG 1 cut(s) 378
AoxI GGCC 4 cut(s) 138, 181, 1076, 1571
ApeKI GCWGC 2 cut(s) 471, 1664
AsiGI ACCGGT 1 cut(s) 214
AspA2I CCTAGG 1 cut(s) 967
AspS9I GGNCC 2 cut(s) 182, 899
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 4 cut(s) 204, 500, 567, 607
AsuII TTCGAA 1 cut(s) 541
AvaI CYCGRG 1 cut(s) 378
AvaII GGWCC 1 cut(s) 899
AvrII CCTAGG 1 cut(s) 967
AxyI CCTNAGG 1 cut(s) 1563
BanI GGYRCC 2 cut(s) 250, 1297
BanII GRGCYC 1 cut(s) 301
BbsI GAAGAC 2 cut(s) 738, 1109
BbvI GCAGC 2 cut(s) 458, 1676
BccI CCATC 3 cut(s) 512, 845, 1310
BciT130I CCWGG 1 cut(s) 1638
BcnI CCSGG 1 cut(s) 296
BcoDI GTCTC 2 cut(s) 147, 868
BfaI CTAG 3 cut(s) 845, 968, 1230
BfmI CTRYAG 3 cut(s) 409, 1501, 1662
BfrI CTTAAG 1 cut(s) 1489
BfuAI ACCTGC 1 cut(s) 556
BglI GCCNNNNNGGC 1 cut(s) 81
BglII AGATCT 1 cut(s) 1162
BisI GCNGC 3 cut(s) 82, 472, 1665
BlnI CCTAGG 1 cut(s) 967
BlsI GCNGC 3 cut(s) 83, 473, 1666
BmcAI AGTACT 1 cut(s) 924
Bme1390I CCNGG 2 cut(s) 296, 1638
Bme18I GGWCC 1 cut(s) 899
BmeT110I CYCGRG 1 cut(s) 378
BmgT120I GGNCC 2 cut(s) 182, 899
BmiI GGNNCC 4 cut(s) 252, 965, 1282, 1299
BmrFI CCNGG 2 cut(s) 296, 1638
BmsI GCATC 2 cut(s) 614, 621
BoxI GACNNNNGTC 1 cut(s) 1069
BpiI GAAGAC 2 cut(s) 738, 1109
BpmI CTGGAG 1 cut(s) 171
Bpu14I TTCGAA 1 cut(s) 541
BpuEI CTTGAG 1 cut(s) 121
BpuMI CCSGG 1 cut(s) 296
BsaJI CCNNGG 3 cut(s) 76, 246, 967
BsaWI WCCGGW 1 cut(s) 214
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 1146
Bse118I RCCGGY 1 cut(s) 214
Bse21I CCTNAGG 1 cut(s) 1563
BseBI CCWGG 1 cut(s) 1638
BseDI CCNNGG 3 cut(s) 76, 246, 967
BseGI GGATG 3 cut(s) 331, 636, 856
BseLI CCNNNNNNNGG 2 cut(s) 322, 1146
BseMII CTCAG 6 cut(s) 63, 294, 897, 1227, 1461, 1554
BseRI GAGGAG 3 cut(s) 142, 676, 1257
BseXI GCAGC 2 cut(s) 458, 1676
BseYI CCCAGC 1 cut(s) 347
BsgI GTGCAG 1 cut(s) 457
BshFI GGCC 4 cut(s) 140, 183, 1078, 1573
BshNI GGYRCC 2 cut(s) 250, 1297
BshTI ACCGGT 1 cut(s) 214
BsiHKCI CYCGRG 1 cut(s) 378
BsiSI CCGG 2 cut(s) 215, 295
BslFI GGGAC 3 cut(s) 287, 838, 1508
BslI CCNNNNNNNGG 2 cut(s) 322, 1146
BsmAI GTCTC 2 cut(s) 147, 868
BsmFI GGGAC 3 cut(s) 287, 838, 1508
BsmI GAATGC 4 cut(s) 6, 651, 1490, 1693
BsnI GGCC 4 cut(s) 140, 183, 1078, 1573
BsoBI CYCGRG 1 cut(s) 378
Bsp119I TTCGAA 1 cut(s) 541
Bsp1286I GDGCHC 1 cut(s) 301
Bsp143I GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
BspANI GGCC 4 cut(s) 140, 183, 1078, 1573
BspCNI CTCAG 6 cut(s) 62, 293, 898, 1226, 1462, 1555
BspHI TCATGA 1 cut(s) 1402
BspLI GGNNCC 4 cut(s) 252, 965, 1282, 1299
BspMAI CTGCAG 3 cut(s) 413, 1505, 1666
BspMI ACCTGC 1 cut(s) 556
BspPI GGATC 3 cut(s) 537, 1400, 1458
BspT104I TTCGAA 1 cut(s) 541
BspT107I GGYRCC 2 cut(s) 250, 1297
BspTI CTTAAG 1 cut(s) 1489
BsrFI RCCGGY 1 cut(s) 214
BssAI RCCGGY 1 cut(s) 214
BssECI CCNNGG 3 cut(s) 76, 246, 967
BssMI GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
BssNAI GTATAC 1 cut(s) 832
BssT1I CCWWGG 3 cut(s) 76, 246, 967
Bst1107I GTATAC 1 cut(s) 832
Bst2UI CCWGG 1 cut(s) 1638
Bst4CI ACNGT 4 cut(s) 434, 829, 1588, 1768
Bst6I CTCTTC 4 cut(s) 866, 984, 1264, 1379
BstAFI CTTAAG 1 cut(s) 1489
BstBI TTCGAA 1 cut(s) 541
BstC8I GCNNGC 1 cut(s) 454
BstDEI CTNAG 7 cut(s) 49, 280, 579, 906, 1213, 1470, 1563
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 331, 636, 856
BstKTI GATC 7 cut(s) 331, 532, 600, 1165, 1249, 1408, 1466
BstMAI GTCTC 2 cut(s) 147, 868
BstMBI GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
BstMWI GCNNNNNNNGC 1 cut(s) 81
BstNI CCWGG 1 cut(s) 1638
BstNSI RCATGY 2 cut(s) 1018, 1439
BstPAI GACNNNNGTC 1 cut(s) 1069
BstSCI CCNGG 2 cut(s) 294, 1636
BstSFI CTRYAG 3 cut(s) 409, 1501, 1662
BstV1I GCAGC 2 cut(s) 458, 1676
BstV2I GAAGAC 2 cut(s) 738, 1109
BstX2I RGATCY 3 cut(s) 529, 1162, 1463
BstYI RGATCY 3 cut(s) 529, 1162, 1463
BstZ17I GTATAC 1 cut(s) 832
Bsu36I CCTNAGG 1 cut(s) 1563
BsuRI GGCC 4 cut(s) 140, 183, 1078, 1573
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 3 cut(s) 331, 636, 856
BtsIMutI CAGTG 1 cut(s) 777
BveI ACCTGC 1 cut(s) 556
Cac8I GCNNGC 1 cut(s) 454
CaiI CAGNNNCTG 1 cut(s) 779
CciI TCATGA 1 cut(s) 1402
Cfr10I RCCGGY 1 cut(s) 214
Cfr13I GGNCC 2 cut(s) 182, 899
CsiI ACCWGGT 1 cut(s) 1636
Csp6I GTAC 2 cut(s) 222, 923
CspAI ACCGGT 1 cut(s) 214
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviAII CATG 8 cut(s) 77, 1015, 1225, 1403, 1436, 1440, 1597, 1680
CviQI GTAC 2 cut(s) 222, 923
DdeI CTNAG 7 cut(s) 49, 280, 579, 906, 1213, 1470, 1563
DpnI GATC 7 cut(s) 330, 531, 599, 1164, 1248, 1407, 1465
DpnII GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
DraI TTTAAA 2 cut(s) 231, 495
Eam1104I CTCTTC 4 cut(s) 866, 984, 1264, 1379
EarI CTCTTC 4 cut(s) 866, 984, 1264, 1379
Eco130I CCWWGG 3 cut(s) 76, 246, 967
Eco24I GRGCYC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 899
Eco57I CTGAAG 3 cut(s) 537, 926, 1275
Eco81I CCTNAGG 1 cut(s) 1563
Eco88I CYCGRG 1 cut(s) 378
EcoRII CCWGG 1 cut(s) 1636
EcoT14I CCWWGG 3 cut(s) 76, 246, 967
EcoT22I ATGCAT 1 cut(s) 1441
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 3 cut(s) 76, 246, 967
FaeI CATG 8 cut(s) 80, 1018, 1228, 1406, 1439, 1443, 1600, 1683
FaqI GGGAC 3 cut(s) 287, 838, 1508
FatI CATG 8 cut(s) 76, 1014, 1224, 1402, 1435, 1439, 1596, 1679
FauI CCCGC 1 cut(s) 1373
FblI GTMKAC 2 cut(s) 106, 831
Fnu4HI GCNGC 3 cut(s) 82, 472, 1665
FokI GGATG 3 cut(s) 338, 643, 863
FriOI GRGCYC 1 cut(s) 301
Fsp4HI GCNGC 3 cut(s) 82, 472, 1665
FspBI CTAG 3 cut(s) 845, 968, 1230
GluI GCNGC 3 cut(s) 82, 472, 1665
GsaI CCCAGC 1 cut(s) 351
GsuI CTGGAG 1 cut(s) 171
HaeIII GGCC 4 cut(s) 140, 183, 1078, 1573
HapII CCGG 2 cut(s) 215, 295
Hin1II CATG 8 cut(s) 80, 1018, 1228, 1406, 1439, 1443, 1600, 1683
HindIII AAGCTT 1 cut(s) 509
HinfI GANTC 9 cut(s) 130, 374, 706, 876, 1136, 1496, 1591, 1670, 1754
HpaII CCGG 2 cut(s) 215, 295
HphI GGTGA 4 cut(s) 204, 500, 567, 607
Hpy166II GTNNAC 4 cut(s) 34, 107, 762, 832
Hpy188III TCNNGA 7 cut(s) 100, 150, 882, 1133, 1140, 1403, 1562
Hpy8I GTNNAC 4 cut(s) 34, 107, 762, 832
HpyAV CCTTC 4 cut(s) 315, 806, 1250, 1451
HpyCH4III ACNGT 4 cut(s) 434, 829, 1588, 1768
HpyCH4IV ACGT 1 cut(s) 537
HpyF10VI GCNNNNNNNGC 1 cut(s) 81
HpyF3I CTNAG 7 cut(s) 49, 280, 579, 906, 1213, 1470, 1563
HpySE526I ACGT 1 cut(s) 537
Hsp92II CATG 8 cut(s) 80, 1018, 1228, 1406, 1439, 1443, 1600, 1683
Kzo9I GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
LmnI GCTCC 1 cut(s) 969
Lsp1109I GCAGC 2 cut(s) 458, 1676
LweI GCATC 2 cut(s) 614, 621
MabI ACCWGGT 1 cut(s) 1636
MaeI CTAG 3 cut(s) 845, 968, 1230
MaeII ACGT 1 cut(s) 537
MaeIII GTNAC 3 cut(s) 161, 769, 1261
MalI GATC 7 cut(s) 330, 531, 599, 1164, 1248, 1407, 1465
MboI GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
MfeI CAATTG 1 cut(s) 1311
MflI RGATCY 3 cut(s) 529, 1162, 1463
MhlI GDGCHC 1 cut(s) 301
MluCI AATT 8 cut(s) 89, 208, 418, 557, 861, 1311, 1322, 1732
MlyI GAGTC 4 cut(s) 139, 870, 1490, 1748
MmeI TCCRAC 4 cut(s) 333, 787, 1258, 1347
Mph1103I ATGCAT 1 cut(s) 1441
MseI TTAA 8 cut(s) 41, 230, 494, 560, 1167, 1376, 1422, 1490
MslI CAYNNNNRTG 1 cut(s) 629
MspCI CTTAAG 1 cut(s) 1489
MspI CCGG 2 cut(s) 215, 295
MspR9I CCNGG 2 cut(s) 296, 1638
MunI CAATTG 1 cut(s) 1311
Mva1269I GAATGC 4 cut(s) 6, 651, 1490, 1693
MvaI CCWGG 1 cut(s) 1638
MwoI GCNNNNNNNGC 1 cut(s) 81
NciI CCSGG 1 cut(s) 296
NcoI CCATGG 1 cut(s) 76
NdeII GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
NlaIII CATG 8 cut(s) 80, 1018, 1228, 1406, 1439, 1443, 1600, 1683
NlaIV GGNNCC 4 cut(s) 252, 965, 1282, 1299
NmuCI GTSAC 2 cut(s) 161, 769
NsiI ATGCAT 1 cut(s) 1441
NspI RCATGY 2 cut(s) 1018, 1439
NspV TTCGAA 1 cut(s) 541
PagI TCATGA 1 cut(s) 1402
PcsI WCGNNNNNNNCGW 2 cut(s) 726, 735
PctI GAATGC 4 cut(s) 6, 651, 1490, 1693
PfeI GAWTC 5 cut(s) 374, 706, 1136, 1591, 1670
PinAI ACCGGT 1 cut(s) 214
PkrI GCNGC 3 cut(s) 83, 473, 1666
PleI GAGTC 4 cut(s) 138, 870, 1490, 1748
PpsI GAGTC 4 cut(s) 138, 870, 1490, 1748
PshAI GACNNNNGTC 1 cut(s) 1069
Psp1406I AACGTT 1 cut(s) 537
Psp6I CCWGG 1 cut(s) 1636
PspFI CCCAGC 1 cut(s) 347
PspGI CCWGG 1 cut(s) 1636
PspN4I GGNNCC 4 cut(s) 252, 965, 1282, 1299
PspPI GGNCC 2 cut(s) 182, 899
PstI CTGCAG 3 cut(s) 413, 1505, 1666
PstNI CAGNNNCTG 1 cut(s) 779
PsuI RGATCY 3 cut(s) 529, 1162, 1463
RsaI GTAC 2 cut(s) 223, 924
RsaNI GTAC 2 cut(s) 222, 923
RseI CAYNNNNRTG 1 cut(s) 629
SaqAI TTAA 8 cut(s) 41, 230, 494, 560, 1167, 1376, 1422, 1490
SatI GCNGC 3 cut(s) 82, 472, 1665
Sau3AI GATC 7 cut(s) 328, 529, 597, 1162, 1246, 1405, 1463
Sau96I GGNCC 2 cut(s) 182, 899
ScaI AGTACT 1 cut(s) 924
SchI GAGTC 4 cut(s) 139, 870, 1490, 1748
ScrFI CCNGG 2 cut(s) 296, 1638
SduI GDGCHC 1 cut(s) 301
SexAI ACCWGGT 1 cut(s) 1636
SfaNI GCATC 2 cut(s) 614, 621
SfcI CTRYAG 3 cut(s) 409, 1501, 1662
SfuI TTCGAA 1 cut(s) 541
SinI GGWCC 1 cut(s) 899
SmiMI CAYNNNNRTG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 100, 1489
SmoI CTYRAG 2 cut(s) 100, 1489
Sse9I AATT 8 cut(s) 89, 208, 418, 557, 861, 1311, 1322, 1732
SsiI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
SspI AATATT 2 cut(s) 750, 1579
SspMI CTAG 3 cut(s) 845, 968, 1230
StyD4I CCNGG 2 cut(s) 294, 1636
StyI CCWWGG 3 cut(s) 76, 246, 967
TaaI ACNGT 4 cut(s) 434, 829, 1588, 1768
TaiI ACGT 1 cut(s) 540
TaqI TCGA 6 cut(s) 143, 402, 541, 738, 1057, 1780
TasI AATT 8 cut(s) 89, 208, 418, 557, 861, 1311, 1322, 1732
TatI WGTACW 2 cut(s) 221, 922
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 5 cut(s) 374, 706, 1136, 1591, 1670
Tru1I TTAA 8 cut(s) 41, 230, 494, 560, 1167, 1376, 1422, 1490
Tru9I TTAA 8 cut(s) 41, 230, 494, 560, 1167, 1376, 1422, 1490
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 2 cut(s) 161, 769
TseI GCWGC 2 cut(s) 471, 1664
Tsp45I GTSAC 2 cut(s) 161, 769
TspGWI ACGGA 1 cut(s) 735
TspRI CASTG 1 cut(s) 784
Vha464I CTTAAG 1 cut(s) 1489
VpaK11BI GGWCC 1 cut(s) 899
XceI RCATGY 2 cut(s) 1018, 1439
XcmI CCANNNNNNNNNTGG 1 cut(s) 1027
XmaJI CCTAGG 1 cut(s) 967
XmiI GTMKAC 2 cut(s) 106, 831
XspI CTAG 3 cut(s) 845, 968, 1230
ZrmI AGTACT 1 cut(s) 924
Zsp2I ATGCAT 1 cut(s) 1441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.