RLG00000032831

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000201
Physical Location & Seq
Forward (+)
19523431 .. 19524703
1273 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032831

Sequence Viewer

Length: 450 bp
ATGAGTTTGAGCACAGAAAGCAACTGCATCGGATCTAATCCTCTTCGTCGGGGAAAACTAGTGACAGGAGAAGAAATAGCTGTGAAGAAGCTTTCAACATTTTCAGGGCAGGGCGTTGGTTACATGCCTCCGAAATATGCTAGAGAGGGAATTTTACCTCTAAAAACTGACGTCTACAGTTTTGGAGTATTACTGCTTGAGATCATAAGTGGGAGGAAGAGCAATAGCTTCTACAATGATGATCATGTGCTCAATATAGTAGGATATGCATGGAGATTATGGAAAGACGGTACATGGATAGAACTAATGGATCCAACATTAGGCGATTCATGTAATAGGAATCAATTTCTAAGATGTGTCCATGACGAGTCCATGTTGGTCTACTATGCGTTGAGGAAAATGGAGGGATCGGCCGACTATGTTAGAAGTGATACACATATTGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

150

Amino Acids

16.86

Weight (kDa)

5.92

Isoelectric Point (pI)

53.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21366
fragaria_vesca FvH4_3g15730 FvH4_3g21351 FvH4_3g21401 FvH4_3g21420
malus_domestica MD00G1151400.v1.1 MD03G1185300.v1.1 MD05G1217100.v1.1 MD05G1217400.v1.1 MD05G1220300.v1.1 MD05G1232800.v1.1 MD05G1332500.v1.1 MD05G1332800.v1.1 MD09G1059900.v1.1 MD10G1308300.v1.1 MD11G1231000.v1.1 MD12G1047500.v1.1 MD17G1273100.v1.1
prunus_persica Prupe.4G031700_v2.0.a1 Prupe.4G031700_v2.0.a1 Prupe.4G142200_v2.0.a1 Prupe.4G142700_v2.0.a1 Prupe.4G195200_v2.0.a1 Prupe.4G195600_v2.0.a1 Prupe.4G195800_v2.0.a1 Prupe.4G196000_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196200_v2.0.a1 Prupe.4G196400_v2.0.a1 Prupe.4G237800_v2.0.a1
pyrus_communis pycom03g16470 pycom03g16480 pycom03g16490 pycom03g16500 pycom03g16510 pycom05g19890 pycom05g20180 pycom05g20300 pycom05g30520 pycom09g02440 pycom11g20450
rosa_chinensis RchiOBHm_Chr1g0363501 RchiOBHm_Chr3g0477311 RchiOBHm_Chr3g0483581 RchiOBHm_Chr4g0411701 RchiOBHm_Chr5g0025991 RchiOBHm_Chr5g0026501 RchiOBHm_Chr5g0026541 RchiOBHm_Chr5g0026771 RchiOBHm_Chr5g0035631 RchiOBHm_Chr5g0035871 RchiOBHm_Chr5g0036451 RchiOBHm_Chr5g0036751 RchiOBHm_Chr5g0036771 RchiOBHm_Chr5g0036781 RchiOBHm_Chr5g0036801 RchiOBHm_Chr5g0036851
rosa_laevigata RLG00000031277 RLG00000032829 RLG00000032831 RLG00000032890 RLG00000032895 RLG00000032899 RLG00000032924 RLG00000033714 RLG00000033715 RLG00000033719 RLG00000033720 RLG00000033722 RLG00000033726
rosa_multiflora Rmu_co8109542.1_g000001 Rmu_co8147940.1_g000001 Rmu_co8162180.1_g000001 Rmu_co8193822.1_g000001 Rmu_co8362785.1_g000001 Rmu_co8410231.1_g000001 Rmu_co8422055.1_g000001 Rmu_sc0000149.1_g000048 Rmu_sc0000399.1_g000001 Rmu_sc0000555.1_g000013 Rmu_sc0000593.1_g000001 Rmu_sc0001348.1_g000035 Rmu_sc0004371.1_g000010 Rmu_sc0004371.1_g000019 Rmu_sc0005555.1_g000004 Rmu_sc0006059.1_g000074 Rmu_sc0006968.1_g000016 Rmu_sc0006968.1_g000018 Rmu_sc0006968.1_g000022 Rmu_sc0008732.1_g000004 Rmu_sc0010714.1_g000004 Rmu_sc0015364.1_g000001 Rmu_sc0015448.1_g000001 Rmu_sc0016543.1_g000005 Rmu_sc0025001.1_g000005
rosa_roxburghii Rroxscaffold_176G00431020 Rroxscaffold_1G00007210 Rroxscaffold_1G00044150 Rroxscaffold_1G00044170 Rroxscaffold_1G00044190 Rroxscaffold_1G00044220 Rroxscaffold_1G00044860 Rroxscaffold_1G00044870 Rroxscaffold_1G00052580 Rroxscaffold_1G00052940 Rroxscaffold_1G00053250 Rroxscaffold_1G00070620 Rroxscaffold_1G00070690 Rroxscaffold_1G00070720 Rroxscaffold_5G00353610 Rroxscaffold_6G00398200 Rroxscaffold_7G00204580
rosa_rugosa Rorug01G0307900 Rorug03G0207300 Rorug05G0086700 Rorug05G0156300 Rorug05G0157800 Rorug05G0157900 Rorug05G0157900 Rorug05G0157900
rosa_samantha Rh1BG280000 Rh3AG255400 Rh5AG189100 Rh5AG250500 Rh5BG252100 Rh5CG198600 Rh5CG203300 Rh5CG205400 Rh5CG206200 Rh5CG206600 Rh5CG281100 Rh5CG282300 Rh5CG283600 Rh5CG283800 Rh5CG284100 Rh5CG424200 Rh5DG181000 Rh5DG258000 Rh5DG260000 Rh5DG260400 Rh5DG260500
rosa_wichuraiana Rw1G028060 Rw3G023100 Rw5G016880 Rw5G017170 Rw5G022990 Rw5G023010 Rw5G023030 Rw5G023040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 174
AccI GTMKAC 2 cut(s) 174, 381
AclWI GGATC 4 cut(s) 40, 305, 318, 415
AcoI YGGCCR 1 cut(s) 411
AcsI RAATTY 1 cut(s) 150
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 1 cut(s) 292
AfiI CCNNNNNNNGG 1 cut(s) 320
AgsI TTSAA 1 cut(s) 96
AhlI ACTAGT 1 cut(s) 58
AluBI AGCT 3 cut(s) 80, 91, 228
AluI AGCT 3 cut(s) 80, 91, 228
Alw21I GWGCWC 2 cut(s) 14, 252
AlwI GGATC 4 cut(s) 40, 305, 318, 415
AoxI GGCC 1 cut(s) 411
ApoI RAATTY 1 cut(s) 150
BamHI GGATCC 1 cut(s) 310
Bbv12I GWGCWC 2 cut(s) 14, 252
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BclI TGATCA 1 cut(s) 241
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 2 cut(s) 59, 141
BfmI CTRYAG 1 cut(s) 175
BmiI GGNNCC 1 cut(s) 312
BmsI GCATC 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 171
Bsc4I CCNNNNNNNGG 1 cut(s) 320
BseLI CCNNNNNNNGG 1 cut(s) 320
BseX3I CGGCCG 1 cut(s) 411
Bsh1285I CGRYCG 1 cut(s) 414
BshFI GGCC 1 cut(s) 413
BsiEI CGRYCG 1 cut(s) 414
BsiHKAI GWGCWC 2 cut(s) 14, 252
BslI CCNNNNNNNGG 1 cut(s) 320
BsnI GGCC 1 cut(s) 413
Bsp1286I GDGCHC 2 cut(s) 14, 252
Bsp143I GATC 5 cut(s) 32, 201, 241, 310, 407
BspANI GGCC 1 cut(s) 413
BspLI GGNNCC 1 cut(s) 312
BspPI GGATC 4 cut(s) 40, 305, 318, 415
BspQI GCTCTTC 1 cut(s) 212
BssMI GATC 5 cut(s) 32, 201, 241, 310, 407
BssNI GRCGYC 1 cut(s) 171
Bst4CI ACNGT 2 cut(s) 179, 290
Bst6I CTCTTC 2 cut(s) 48, 212
BstACI GRCGYC 1 cut(s) 171
BstDEI CTNAG 1 cut(s) 350
BstKTI GATC 5 cut(s) 35, 204, 244, 313, 410
BstMBI GATC 5 cut(s) 32, 201, 241, 310, 407
BstMCI CGRYCG 1 cut(s) 414
BstMWI GCNNNNNNNGC 1 cut(s) 18
BstNSI RCATGY 1 cut(s) 127
BstSFI CTRYAG 1 cut(s) 175
BstX2I RGATCY 2 cut(s) 32, 310
BstYI RGATCY 2 cut(s) 32, 310
BstZI CGGCCG 1 cut(s) 411
BsuRI GGCC 1 cut(s) 413
Csp6I GTAC 1 cut(s) 291
CviAII CATG 7 cut(s) 124, 245, 270, 294, 330, 362, 373
CviJI RGCY 4 cut(s) 80, 91, 228, 413
CviKI_1 RGCY 4 cut(s) 80, 91, 228, 413
CviQI GTAC 1 cut(s) 291
DdeI CTNAG 1 cut(s) 350
DpnI GATC 5 cut(s) 34, 203, 243, 312, 409
DpnII GATC 5 cut(s) 32, 201, 241, 310, 407
EaeI YGGCCR 1 cut(s) 411
EagI CGGCCG 1 cut(s) 411
Eam1104I CTCTTC 2 cut(s) 48, 212
EarI CTCTTC 2 cut(s) 48, 212
EclXI CGGCCG 1 cut(s) 411
Eco52I CGGCCG 1 cut(s) 411
EcoT22I ATGCAT 1 cut(s) 271
FaeI CATG 7 cut(s) 127, 248, 273, 297, 333, 365, 376
FatI CATG 7 cut(s) 123, 244, 269, 293, 329, 361, 372
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 2 cut(s) 174, 381
FspBI CTAG 2 cut(s) 59, 141
HaeIII GGCC 1 cut(s) 413
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 7 cut(s) 127, 248, 273, 297, 333, 365, 376
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 3 cut(s) 326, 340, 368
Hpy166II GTNNAC 2 cut(s) 175, 382
Hpy188I TCNGA 2 cut(s) 32, 132
Hpy8I GTNNAC 2 cut(s) 175, 382
Hpy99I CGWCG 1 cut(s) 51
HpyCH4III ACNGT 2 cut(s) 179, 290
HpyCH4IV ACGT 1 cut(s) 171
HpyCH4V TGCA 2 cut(s) 27, 269
HpyF10VI GCNNNNNNNGC 1 cut(s) 18
HpyF3I CTNAG 1 cut(s) 350
HpySE526I ACGT 1 cut(s) 171
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 7 cut(s) 127, 248, 273, 297, 333, 365, 376
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 5 cut(s) 32, 201, 241, 310, 407
LguI GCTCTTC 1 cut(s) 212
LpnPI CCDG 3 cut(s) 51, 90, 95
LweI GCATC 1 cut(s) 36
MaeI CTAG 2 cut(s) 59, 141
MaeII ACGT 1 cut(s) 171
MaeIII GTNAC 2 cut(s) 61, 119
MalI GATC 5 cut(s) 34, 203, 243, 312, 409
MboI GATC 5 cut(s) 32, 201, 241, 310, 407
MboII GAAGA 4 cut(s) 35, 83, 97, 229
MflI RGATCY 2 cut(s) 32, 310
MhlI GDGCHC 2 cut(s) 14, 252
MluCI AATT 2 cut(s) 150, 344
MlyI GAGTC 1 cut(s) 377
MmeI TCCRAC 1 cut(s) 338
MnlI CCTC 7 cut(s) 51, 138, 139, 168, 207, 387, 397
Mph1103I ATGCAT 1 cut(s) 271
MslI CAYNNNNRTG 1 cut(s) 441
MwoI GCNNNNNNNGC 1 cut(s) 18
NdeII GATC 5 cut(s) 32, 201, 241, 310, 407
NlaIII CATG 7 cut(s) 127, 248, 273, 297, 333, 365, 376
NlaIV GGNNCC 1 cut(s) 312
NmuCI GTSAC 1 cut(s) 61
NsiI ATGCAT 1 cut(s) 271
NspI RCATGY 1 cut(s) 127
PciSI GCTCTTC 1 cut(s) 212
PfeI GAWTC 2 cut(s) 326, 340
PleI GAGTC 1 cut(s) 376
PpsI GAGTC 1 cut(s) 376
PspN4I GGNNCC 1 cut(s) 312
PsuI RGATCY 2 cut(s) 32, 310
RsaI GTAC 1 cut(s) 292
RsaNI GTAC 1 cut(s) 291
RseI CAYNNNNRTG 1 cut(s) 441
SapI GCTCTTC 1 cut(s) 212
Sau3AI GATC 5 cut(s) 32, 201, 241, 310, 407
SchI GAGTC 1 cut(s) 377
SduI GDGCHC 2 cut(s) 14, 252
SetI ASST 5 cut(s) 82, 93, 160, 174, 230
SfaNI GCATC 1 cut(s) 36
SfcI CTRYAG 1 cut(s) 175
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
SpeI ACTAGT 1 cut(s) 58
Sse9I AATT 2 cut(s) 150, 344
SspMI CTAG 2 cut(s) 59, 141
TaaI ACNGT 2 cut(s) 179, 290
TaiI ACGT 1 cut(s) 174
TasI AATT 2 cut(s) 150, 344
TfiI GAWTC 2 cut(s) 326, 340
TseFI GTSAC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 1 cut(s) 318
XapI RAATTY 1 cut(s) 150
XceI RCATGY 1 cut(s) 127
XmiI GTMKAC 2 cut(s) 174, 381
XspI CTAG 2 cut(s) 59, 141
ZraI GACGTC 1 cut(s) 172
Zsp2I ATGCAT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.