AT2G22830

squalene epoxidase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
9723615 .. 9726384
2770 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22830.1

Sequence Viewer

Length: 1758 bp
ATGAAACCATTCGTAATCAGGAACCTTCCAAGATTTCAATCAACTCTTAGATCTTCGCTTCTCTACACAAATCATCGCCCCTCTTCTCGATTCTCTCTCTCTACTCGTCGATTCACCACCGGAGCCACCTACATTCGCCGATGGAAAGCAACGGCGGCGCAGACACTCAAACTCTCCGCCGTGAACTCCACGGTGATGATGAAACCGGCGAAGATTGCGTTGGATCAATTTATAGCTTCTCTATTTACGTTTCTGCTTCTCTACATTTTGCGTCGGAGTAGTAATAAGAATAAGAAGAATCGTGGACTCGTCGTTTCCCAAAACGATACCGTATCCAAAAATCTTGAAACGGAGGTTGATTCTGGCACTGATGTGATCATCGTCGGAGCTGGTGTCGCCGGTTCCGCTCTTGCTCATACTCTCGGCAAGGAAGGAAGAAGAGTGCACGTTATAGAAAGAGATTTTTCTGAGCAAGACAGAATCGTTGGTGAATTGCTTCAACCTGGTGGTTATTTGAAGTTAATAGAACTTGGACTTGAAGATTGTGTGAAGAAGATTGATGCTCAACGAGTTCTTGGTTATGTTCTCTTTAAAGATGGGAAGCATACTAAACTTGCTTACCCCTTGGAAACGTTTGATTCGGATGTAGCCGGGAGAAGTTTCCATAATGGGAGATTTGTACAGAGAATGCGAGAAAAAGCCCTTACTCTTTCAAATGTACGATTGGAACAAGGAACGGTTACGTCGTTGCTTGAAGAACACGGGACAATTAAAGGGGTTCGATACAGAACAAAAGAGGGCAATGAGTTTAGATCATTTGCTCCTCTCACAATTGTATGTGATGGTTGTTTCTCCAACTTGCGTCGCTCTCTTTGCAAACCTAAGGTGGATGTGCCATCTACTTTTGTGGGTCTTGTCTTGGAGAACTGTGAACTTCCATTTGCAAATCACGGGCACGTTGTTCTCGGTGACCCATCACCCATCTTAATGTATCCCATCAGCAGTTCTGAAGTCCGTTGCTTAGTAGATGTACCGGGTCAAAAACTTCCTCCCATTGCAAATGGTGAAATGGCAAAGTATCTGAAAACACGGGTTGCGCCTCAAGTACCAACCAAGGTCCGTGAAGCATTCATCACCGCTGTTGAGAAAGGTAATATCAGAACCATGCCAAACCGAAGCATGCCAGCTGATCCGATTCCTACTCCTGGAGCTCTTCTTCTTGGTGATGCATTCAACATGAGACATCCTTTAACCGGTGGTGGGATGACCGTTGCATTGGCGGATATAGTTGTACTCCGTGATCTTCTAAGGCCAATTCGCAACCTTAATGACAAAGAAGCTTTGTCTAAGTATATTGAATCCTTTTACACACTACGAAAACCTGTAGCTTCCACCATTAATACATTGGCGGATGCGTTGTATAAGGTCTTTTTAGCATCTTCAGATGAAGCAAGAACGGAAATGCGTGAAGCTTGCTTCGACTATCTTAGCCTTGGAGGTGTTTTCTCATCTGGTCCAGTTGCATTGCTCTCTGGTTTAAACCCTCGTCCTCTGAGTTTAGTTCTCCACTTCTTTGCTGTGGCGATCTACGCTGTTTGTCGTTTAATGCTACCATTTCCTTCGATTGAGAGCTTTTGGCTTGGAGCTAGGATAATCTCGAGTGCTTCAAGCATCATCTTTCCAATAATTAAAGCAGAGGGAGTTAGACAAATGTTCTTCCCTCGTACAATCCCTGCCATATACCGTGCTCCTCCTTAA

Protein Analysis

585

Amino Acids

64.79

Weight (kDa)

9.76

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 123 - 451 1.8e-17 FAD binding domain
SE PF08491 273 - 543 1.5e-124 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 407
AciI CCGC 6 cut(s) 155, 177, 405, 1137, 1280, 1409
AclI AACGTT 1 cut(s) 632
AclWI GGATC 2 cut(s) 231, 1184
AcuI CTGAAG 2 cut(s) 1029, 1425
AfaI GTAC 6 cut(s) 681, 720, 1032, 1107, 1293, 1726
AfiI CCNNNNNNNGG 3 cut(s) 1205, 1253, 1260
AgeI ACCGGT 1 cut(s) 1253
AjnI CCWGG 2 cut(s) 502, 1204
AjuI GAANNNNNNNTTGG 2 cut(s) 203, 235
AleI CACNNNNGTG 1 cut(s) 371
AluBI AGCT 9 cut(s) 236, 389, 1187, 1211, 1340, 1388, 1472, 1632, 1646
AluI AGCT 9 cut(s) 236, 389, 1187, 1211, 1340, 1388, 1472, 1632, 1646
Alw21I GWGCWC 3 cut(s) 447, 1213, 1750
Alw26I GTCTC 1 cut(s) 1234
Alw44I GTGCAC 1 cut(s) 443
AlwI GGATC 2 cut(s) 231, 1184
Ama87I CYCGRG 1 cut(s) 1657
AoxI GGCC 1 cut(s) 1310
ApaLI GTGCAC 1 cut(s) 443
AseI ATTAAT 1 cut(s) 1398
AsiGI ACCGGT 1 cut(s) 1253
Asp700I GAANNNNTTC 2 cut(s) 8, 495
AspLEI GCGC 2 cut(s) 160, 1099
AspS9I GGNCC 2 cut(s) 1117, 1514
AsuC2I CCSGG 2 cut(s) 652, 1035
AsuHPI GGTGA 8 cut(s) 106, 205, 500, 969, 980, 1076, 1126, 1235
AvaI CYCGRG 1 cut(s) 1657
AvaII GGWCC 2 cut(s) 1117, 1514
AxyI CCTNAGG 1 cut(s) 882
BaeGI GKGCMC 2 cut(s) 447, 957
BanII GRGCYC 1 cut(s) 1213
Bbv12I GWGCWC 3 cut(s) 447, 1213, 1750
BccI CCATC 7 cut(s) 135, 590, 836, 904, 982, 989, 1004
BceAI ACGGC 2 cut(s) 164, 168
BciT130I CCWGG 2 cut(s) 504, 1206
BciVI GTATCC 2 cut(s) 343, 1002
BclI TGATCA 1 cut(s) 375
BcnI CCSGG 2 cut(s) 652, 1035
BcoDI GTCTC 1 cut(s) 1234
BfaI CTAG 1 cut(s) 1647
BfmI CTRYAG 1 cut(s) 1383
BfuI GTATCC 2 cut(s) 343, 1002
BglII AGATCT 1 cut(s) 50
BisI GCNGC 1 cut(s) 156
BlsI GCNGC 1 cut(s) 157
Bme1390I CCNGG 4 cut(s) 504, 652, 1035, 1206
Bme18I GGWCC 2 cut(s) 1117, 1514
BmeT110I CYCGRG 1 cut(s) 1657
BmgT120I GGNCC 2 cut(s) 1117, 1514
BmiI GGNNCC 3 cut(s) 23, 124, 403
BmrFI CCNGG 4 cut(s) 504, 652, 1035, 1206
BmsI GCATC 5 cut(s) 550, 1216, 1402, 1445, 1680
BpmI CTGGAG 1 cut(s) 1227
BpuEI CTTGAG 1 cut(s) 1086
BpuMI CCSGG 2 cut(s) 652, 1035
BsaBI GATNNNNATC 1 cut(s) 37
BsaJI CCNNGG 4 cut(s) 189, 624, 1113, 1492
BsaWI WCCGGW 2 cut(s) 119, 1253
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 3 cut(s) 1205, 1253, 1260
Bse118I RCCGGY 3 cut(s) 205, 398, 1253
Bse1I ACTGG 1 cut(s) 1517
Bse21I CCTNAGG 1 cut(s) 882
Bse3DI GCAATG 3 cut(s) 808, 1053, 1523
Bse8I GATNNNNATC 1 cut(s) 37
BseBI CCWGG 2 cut(s) 504, 1206
BseDI CCNNGG 4 cut(s) 189, 624, 1113, 1492
BseGI GGATG 5 cut(s) 649, 895, 1243, 1269, 1417
BseJI GATNNNNATC 1 cut(s) 37
BseLI CCNNNNNNNGG 3 cut(s) 1205, 1253, 1260
BseMI GCAATG 3 cut(s) 808, 1053, 1523
BseMII CTCAG 2 cut(s) 459, 1544
BseNI ACTGG 1 cut(s) 1517
BseRI GAGGAG 2 cut(s) 813, 1740
BseSI GKGCMC 2 cut(s) 447, 957
BshFI GGCC 1 cut(s) 1312
BshTI ACCGGT 1 cut(s) 1253
BsiHKAI GWGCWC 3 cut(s) 447, 1213, 1750
BsiHKCI CYCGRG 1 cut(s) 1657
BsiSI CCGG 6 cut(s) 120, 206, 399, 651, 1034, 1254
BslFI GGGAC 1 cut(s) 778
BslI CCNNNNNNNGG 3 cut(s) 1205, 1253, 1260
BsmAI GTCTC 1 cut(s) 1234
BsmFI GGGAC 1 cut(s) 778
BsmI GAATGC 3 cut(s) 693, 1127, 1229
BsnI GGCC 1 cut(s) 1312
BsoBI CYCGRG 1 cut(s) 1657
Bsp1286I GDGCHC 4 cut(s) 447, 957, 1213, 1750
Bsp1407I TGTACA 1 cut(s) 679
Bsp143I GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
BspACI CCGC 6 cut(s) 155, 177, 405, 1137, 1280, 1409
BspANI GGCC 1 cut(s) 1312
BspCNI CTCAG 2 cut(s) 460, 1545
BspLI GGNNCC 3 cut(s) 23, 124, 403
BspPI GGATC 2 cut(s) 231, 1184
BspQI GCTCTTC 1 cut(s) 1218
BsrBI CCGCTC 1 cut(s) 407
BsrDI GCAATG 3 cut(s) 808, 1053, 1523
BsrFI RCCGGY 3 cut(s) 205, 398, 1253
BsrGI TGTACA 1 cut(s) 679
BsrI ACTGG 1 cut(s) 1517
BssAI RCCGGY 3 cut(s) 205, 398, 1253
BssECI CCNNGG 4 cut(s) 189, 624, 1113, 1492
BssMI GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
BssT1I CCWWGG 3 cut(s) 624, 1113, 1492
Bst2UI CCWGG 2 cut(s) 504, 1206
Bst4CI ACNGT 6 cut(s) 193, 331, 739, 929, 1270, 1745
Bst6I CTCTTC 3 cut(s) 88, 433, 1218
BstAUI TGTACA 1 cut(s) 679
BstC8I GCNNGC 3 cut(s) 1181, 1185, 1474
BstDEI CTNAG 8 cut(s) 47, 468, 882, 1021, 1307, 1347, 1487, 1553
BstDSI CCRYGG 1 cut(s) 189
BstEII GGTNACC 1 cut(s) 968
BstF5I GGATG 5 cut(s) 649, 895, 1243, 1269, 1417
BstHHI GCGC 2 cut(s) 160, 1099
BstKTI GATC 7 cut(s) 53, 226, 378, 815, 1192, 1303, 1587
BstMAI GTCTC 1 cut(s) 1234
BstMBI GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
BstMWI GCNNNNNNNGC 6 cut(s) 155, 215, 395, 404, 873, 1589
BstNI CCWGG 2 cut(s) 504, 1206
BstNSI RCATGY 1 cut(s) 1183
BstPI GGTNACC 1 cut(s) 968
BstSCI CCNGG 4 cut(s) 502, 650, 1033, 1204
BstSFI CTRYAG 1 cut(s) 1383
BstSLI GKGCMC 2 cut(s) 447, 957
BstX2I RGATCY 1 cut(s) 50
BstYI RGATCY 1 cut(s) 50
Bsu36I CCTNAGG 1 cut(s) 882
BsuI GTATCC 2 cut(s) 343, 1002
BsuRI GGCC 1 cut(s) 1312
BtgI CCRYGG 1 cut(s) 189
BtgZI GCGATG 1 cut(s) 59
BtsCI GGATG 5 cut(s) 649, 895, 1243, 1269, 1417
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 3 cut(s) 1181, 1185, 1474
CfoI GCGC 2 cut(s) 160, 1099
Cfr10I RCCGGY 3 cut(s) 205, 398, 1253
Cfr13I GGNCC 2 cut(s) 1117, 1514
CseI GACGC 2 cut(s) 260, 851
CsiI ACCWGGT 1 cut(s) 502
Csp6I GTAC 6 cut(s) 680, 719, 1031, 1106, 1292, 1725
CspAI ACCGGT 1 cut(s) 1253
CviAII CATG 3 cut(s) 1165, 1180, 1237
CviQI GTAC 6 cut(s) 680, 719, 1031, 1106, 1292, 1725
DdeI CTNAG 8 cut(s) 47, 468, 882, 1021, 1307, 1347, 1487, 1553
DpnI GATC 7 cut(s) 52, 225, 377, 814, 1191, 1302, 1586
DpnII GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
DraI TTTAAA 2 cut(s) 592, 1539
Eam1104I CTCTTC 3 cut(s) 88, 433, 1218
EarI CTCTTC 3 cut(s) 88, 433, 1218
EciI GGCGGA 3 cut(s) 166, 1295, 1424
Ecl136II GAGCTC 1 cut(s) 1211
Eco130I CCWWGG 3 cut(s) 624, 1113, 1492
Eco24I GRGCYC 1 cut(s) 1213
Eco47I GGWCC 2 cut(s) 1117, 1514
Eco53kI GAGCTC 1 cut(s) 1211
Eco57I CTGAAG 2 cut(s) 1029, 1425
Eco81I CCTNAGG 1 cut(s) 882
Eco88I CYCGRG 1 cut(s) 1657
Eco91I GGTNACC 1 cut(s) 968
EcoICRI GAGCTC 1 cut(s) 1211
EcoO65I GGTNACC 1 cut(s) 968
EcoRII CCWGG 2 cut(s) 502, 1204
EcoT14I CCWWGG 3 cut(s) 624, 1113, 1492
EcoT22I ATGCAT 1 cut(s) 1231
EcoT38I GRGCYC 1 cut(s) 1213
ErhI CCWWGG 3 cut(s) 624, 1113, 1492
FaeI CATG 3 cut(s) 1168, 1183, 1240
FaqI GGGAC 1 cut(s) 778
FatI CATG 3 cut(s) 1164, 1179, 1236
FbaI TGATCA 1 cut(s) 375
Fnu4HI GCNGC 1 cut(s) 156
FokI GGATG 5 cut(s) 656, 902, 1230, 1276, 1424
FriOI GRGCYC 1 cut(s) 1213
Fsp4HI GCNGC 1 cut(s) 156
FspBI CTAG 1 cut(s) 1647
GlaI GCGC 2 cut(s) 159, 1098
GluI GCNGC 1 cut(s) 156
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 1 cut(s) 1312
HapII CCGG 6 cut(s) 120, 206, 399, 651, 1034, 1254
HgaI GACGC 2 cut(s) 260, 851
HhaI GCGC 2 cut(s) 160, 1099
Hin1II CATG 3 cut(s) 1168, 1183, 1240
Hin6I GCGC 2 cut(s) 158, 1097
HinP1I GCGC 2 cut(s) 158, 1097
HindIII AAGCTT 2 cut(s) 1338, 1470
HinfI GANTC 9 cut(s) 90, 111, 298, 306, 359, 480, 638, 1195, 1358
HpaII CCGG 6 cut(s) 120, 206, 399, 651, 1034, 1254
HphI GGTGA 8 cut(s) 106, 205, 500, 969, 980, 1076, 1126, 1235
Hpy166II GTNNAC 4 cut(s) 184, 305, 445, 932
Hpy188III TCNNGA 4 cut(s) 19, 87, 344, 1657
Hpy8I GTNNAC 4 cut(s) 184, 305, 445, 932
Hpy99I CGWCG 6 cut(s) 111, 276, 314, 386, 748, 867
HpyAV CCTTC 3 cut(s) 35, 425, 1629
HpyCH4III ACNGT 6 cut(s) 193, 331, 739, 929, 1270, 1745
HpyCH4IV ACGT 5 cut(s) 248, 447, 632, 743, 957
HpyCH4V TGCA 7 cut(s) 445, 876, 944, 1058, 1229, 1274, 1523
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 215, 395, 404, 873, 1589
HpyF3I CTNAG 8 cut(s) 47, 468, 882, 1021, 1307, 1347, 1487, 1553
HpySE526I ACGT 5 cut(s) 248, 447, 632, 743, 957
Hsp92II CATG 3 cut(s) 1168, 1183, 1240
HspAI GCGC 2 cut(s) 158, 1097
Ksp22I TGATCA 1 cut(s) 375
Kzo9I GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
LguI GCTCTTC 1 cut(s) 1218
LmnI GCTCC 6 cut(s) 122, 386, 826, 1208, 1643, 1753
LweI GCATC 5 cut(s) 550, 1216, 1402, 1445, 1680
MabI ACCWGGT 1 cut(s) 502
MaeI CTAG 1 cut(s) 1647
MaeII ACGT 5 cut(s) 248, 447, 632, 743, 957
MaeIII GTNAC 2 cut(s) 739, 968
MalI GATC 7 cut(s) 52, 225, 377, 814, 1191, 1302, 1586
MbiI CCGCTC 1 cut(s) 407
MboI GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
MfeI CAATTG 1 cut(s) 831
MflI RGATCY 1 cut(s) 50
MhlI GDGCHC 4 cut(s) 447, 957, 1213, 1750
MluCI AATT 6 cut(s) 227, 491, 768, 831, 1314, 1686
MlyI GAGTC 1 cut(s) 300
MmeI TCCRAC 4 cut(s) 201, 254, 364, 879
Mph1103I ATGCAT 1 cut(s) 1231
MroXI GAANNNNTTC 2 cut(s) 8, 495
MslI CAYNNNNRTG 3 cut(s) 194, 371, 986
MspA1I CMGCKG 2 cut(s) 1139, 1187
MspI CCGG 6 cut(s) 120, 206, 399, 651, 1034, 1254
MspR9I CCNGG 4 cut(s) 504, 652, 1035, 1206
MssI GTTTAAAC 1 cut(s) 1539
MunI CAATTG 1 cut(s) 831
Mva1269I GAATGC 3 cut(s) 693, 1127, 1229
MvaI CCWGG 2 cut(s) 504, 1206
MwoI GCNNNNNNNGC 6 cut(s) 155, 215, 395, 404, 873, 1589
NciI CCSGG 2 cut(s) 652, 1035
NdeII GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
NlaIII CATG 3 cut(s) 1168, 1183, 1240
NlaIV GGNNCC 3 cut(s) 23, 124, 403
NmeAIII GCCGAG 1 cut(s) 402
NmuCI GTSAC 1 cut(s) 968
NsiI ATGCAT 1 cut(s) 1231
NspI RCATGY 1 cut(s) 1183
OliI CACNNNNGTG 1 cut(s) 371
PaeI GCATGC 1 cut(s) 1183
PaeR7I CTCGAG 1 cut(s) 1657
PciSI GCTCTTC 1 cut(s) 1218
PcsI WCGNNNNNNNCGW 1 cut(s) 743
PctI GAATGC 3 cut(s) 693, 1127, 1229
PdmI GAANNNNTTC 2 cut(s) 8, 495
PfeI GAWTC 8 cut(s) 90, 111, 298, 359, 480, 638, 1195, 1358
PfoI TCCNGGA 1 cut(s) 1204
PinAI ACCGGT 1 cut(s) 1253
PkrI GCNGC 1 cut(s) 157
PleI GAGTC 1 cut(s) 300
PmeI GTTTAAAC 1 cut(s) 1539
PpsI GAGTC 1 cut(s) 300
PshBI ATTAAT 1 cut(s) 1398
Psp124BI GAGCTC 1 cut(s) 1213
Psp1406I AACGTT 1 cut(s) 632
Psp6I CCWGG 2 cut(s) 502, 1204
PspEI GGTNACC 1 cut(s) 968
PspGI CCWGG 2 cut(s) 502, 1204
PspN4I GGNNCC 3 cut(s) 23, 124, 403
PspPI GGNCC 2 cut(s) 1117, 1514
PsuI RGATCY 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 6 cut(s) 681, 720, 1032, 1107, 1293, 1726
RsaNI GTAC 6 cut(s) 680, 719, 1031, 1106, 1292, 1725
RseI CAYNNNNRTG 3 cut(s) 194, 371, 986
SacI GAGCTC 1 cut(s) 1213
SapI GCTCTTC 1 cut(s) 1218
SatI GCNGC 1 cut(s) 156
Sau3AI GATC 7 cut(s) 50, 223, 375, 812, 1189, 1300, 1584
Sau96I GGNCC 2 cut(s) 1117, 1514
SchI GAGTC 1 cut(s) 300
ScrFI CCNGG 4 cut(s) 504, 652, 1035, 1206
SduI GDGCHC 4 cut(s) 447, 957, 1213, 1750
SexAI ACCWGGT 1 cut(s) 502
SfaNI GCATC 5 cut(s) 550, 1216, 1402, 1445, 1680
SfcI CTRYAG 1 cut(s) 1383
Sfr274I CTCGAG 1 cut(s) 1657
SinI GGWCC 2 cut(s) 1117, 1514
SlaI CTCGAG 1 cut(s) 1657
SmiMI CAYNNNNRTG 3 cut(s) 194, 371, 986
SmlI CTYRAG 2 cut(s) 1101, 1657
SmoI CTYRAG 2 cut(s) 1101, 1657
SphI GCATGC 1 cut(s) 1183
Sse9I AATT 6 cut(s) 227, 491, 768, 831, 1314, 1686
SsiI CCGC 6 cut(s) 155, 177, 405, 1137, 1280, 1409
SspMI CTAG 1 cut(s) 1647
SstI GAGCTC 1 cut(s) 1213
StyD4I CCNGG 4 cut(s) 502, 650, 1033, 1204
StyI CCWWGG 3 cut(s) 624, 1113, 1492
TaaI ACNGT 6 cut(s) 193, 331, 739, 929, 1270, 1745
TaiI ACGT 5 cut(s) 251, 450, 635, 746, 960
TaqI TCGA 6 cut(s) 88, 109, 781, 1479, 1622, 1658
TasI AATT 6 cut(s) 227, 491, 768, 831, 1314, 1686
TatI WGTACW 2 cut(s) 679, 1291
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 8 cut(s) 90, 111, 298, 359, 480, 638, 1195, 1358
TscAI CASTG 1 cut(s) 373
TseFI GTSAC 1 cut(s) 968
Tsp45I GTSAC 1 cut(s) 968
TspDTI ATGAA 4 cut(s) 17, 215, 1120, 1461
TspGWI ACGGA 5 cut(s) 365, 1004, 1109, 1286, 1472
TspRI CASTG 1 cut(s) 373
VneI GTGCAC 1 cut(s) 443
VpaK11BI GGWCC 2 cut(s) 1117, 1514
VspI ATTAAT 1 cut(s) 1398
XceI RCATGY 1 cut(s) 1183
XcmI CCANNNNNNNNNTGG 1 cut(s) 1402
XhoI CTCGAG 1 cut(s) 1657
XmnI GAANNNNTTC 2 cut(s) 8, 495
XspI CTAG 1 cut(s) 1647
Zsp2I ATGCAT 1 cut(s) 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.