squalene
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 91 |
| AspLEI | GCGC | 1 cut(s) | 5 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 109 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfoI | RGCGCY | 1 cut(s) | 6 |
| BglII | AGATCT | 1 cut(s) | 148 |
| BmsI | GCATC | 2 cut(s) | 76, 83 |
| BpuEI | CTTGAG | 1 cut(s) | 81 |
| BsgI | GTGCAG | 1 cut(s) | 137 |
| Bsp143I | GATC | 2 cut(s) | 56, 148 |
| BssMI | GATC | 2 cut(s) | 56, 148 |
| Bst4CI | ACNGT | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 1 cut(s) | 137 |
| BstH2I | RGCGCY | 1 cut(s) | 6 |
| BstHHI | GCGC | 1 cut(s) | 5 |
| BstKTI | GATC | 2 cut(s) | 59, 151 |
| BstMBI | GATC | 2 cut(s) | 56, 148 |
| BstNSI | RCATGY | 1 cut(s) | 39 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BtsIMutI | CAGTG | 1 cut(s) | 137 |
| Cac8I | GCNNGC | 1 cut(s) | 137 |
| CfoI | GCGC | 1 cut(s) | 5 |
| CviAII | CATG | 1 cut(s) | 36 |
| CviJI | RGCY | 2 cut(s) | 42, 49 |
| CviKI_1 | RGCY | 2 cut(s) | 42, 49 |
| DpnI | GATC | 2 cut(s) | 58, 150 |
| DpnII | GATC | 2 cut(s) | 56, 148 |
| FaeI | CATG | 1 cut(s) | 39 |
| FaiI | YATR | 4 cut(s) | 37, 79, 91, 141 |
| FatI | CATG | 1 cut(s) | 35 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GlaI | GCGC | 1 cut(s) | 4 |
| HaeII | RGCGCY | 1 cut(s) | 6 |
| HhaI | GCGC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 39 |
| Hin6I | GCGC | 1 cut(s) | 3 |
| HinP1I | GCGC | 1 cut(s) | 3 |
| HphI | GGTGA | 2 cut(s) | 17, 109 |
| Hpy166II | GTNNAC | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 2 cut(s) | 60, 84 |
| Hpy8I | GTNNAC | 1 cut(s) | 162 |
| HpyAV | CCTTC | 2 cut(s) | 32, 94 |
| HpyCH4III | ACNGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 3 cut(s) | 67, 127, 154 |
| Hsp92II | CATG | 1 cut(s) | 39 |
| HspAI | GCGC | 1 cut(s) | 3 |
| Kzo9I | GATC | 2 cut(s) | 56, 148 |
| LpnPI | CCDG | 3 cut(s) | 56, 137, 149 |
| LweI | GCATC | 2 cut(s) | 76, 83 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MalI | GATC | 2 cut(s) | 58, 150 |
| MboI | GATC | 2 cut(s) | 56, 148 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MseI | TTAA | 1 cut(s) | 7 |
| NdeII | GATC | 2 cut(s) | 56, 148 |
| NlaIII | CATG | 1 cut(s) | 39 |
| NspI | RCATGY | 1 cut(s) | 39 |
| PsiI | TTATAA | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| SaqAI | TTAA | 1 cut(s) | 7 |
| Sau3AI | GATC | 2 cut(s) | 56, 148 |
| SetI | ASST | 2 cut(s) | 30, 159 |
| SfaNI | GCATC | 2 cut(s) | 76, 83 |
| SgeI | CNNG | 8 cut(s) | 48, 55, 62, 72, 83, 96, 136, 148 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| SspMI | CTAG | 1 cut(s) | 50 |
| TaaI | ACNGT | 1 cut(s) | 132 |
| Tru1I | TTAA | 1 cut(s) | 7 |
| Tru9I | TTAA | 1 cut(s) | 7 |
| TscAI | CASTG | 1 cut(s) | 137 |
| TspRI | CASTG | 1 cut(s) | 137 |
| XceI | RCATGY | 1 cut(s) | 39 |
| XspI | CTAG | 1 cut(s) | 50 |