FvH4_1g20540

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000108
Physical Location & Seq
Reverse (-)
12737379 .. 12740885
3507 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g20540.t1

Sequence Viewer

Length: 1560 bp
ATGGTGTCCTACGAGTACGTTCTAGGTGGAGTCCTGGCTTCTCTGCTGGCCTCTGTTTACATCATGATTATTTATAGTGCTAGAAAGGTGGCGGGTACAAAAAACAGTGATAATGGGTCTATCAGGATGCCACAAAACGATGAAGAGAAAGGTACCGACGTCGTCATTGTTGGCGCTGGAGTTGCCGGTGCAGCTCTTGCTTACACTCTTTCTAAGGAAGGACGTCGCGTGCATGTCATCGAAAGAGACTTGAGTGAGCCGGACAGAATTGTTGGTGAGCTTTTGCAGCCTGGGGGTTATCTCAAATTGATCGAGCTAGGTCTTGAGGACTGCGCAAATGAATCCATTGATGCTCAGAAGGTGTTTGGTTATGCTATCTACAAAGATGGGAGGGACACAATACTTTCTTATTCCTTGGAGAATTGCGATCCAGATATAGCAGCAGGGAGAAGTTTCCACAATGGGCGTTTCATCCAAAGAATGCGTGGAAAAGCTAAAACTCTTCCAAATGTAAAATTGGAACAAGGGACAGTGACAACTCTAATTGAAGAAAAGGGCACCATCAAAGGAGTGATTTACAAGAACAAAGCTGGAGAGGAGTTGAGAACATATGCTCCTCTTACAATCGTGTGTGATGGCTGCTTTTCAAATCTGCGAAAAAATCTCAGCGCTTCAAAGGTTGAAAGTCCCTCATGTATTGTTGGTTTCATATTGGAGAACTGTGACCTTCCACATGCAAATCATGGTCATGTAATTTTGGGCGACCCTTCTCCTATCGTGTTTTATCCTATCAGCAACACAGAGATTCGTTGTCTGGTTGATATCCCAGGAACAAAAATTCCTTCAGTAGCTAATGGTGAAATGGCCAAGTATTTGAAAACCGTGGTGGCTCCTCAGATTCCTCCTCAGCTCTACAATTCTTTTATAGCTGCAATTGATAAGGGAAACATTAGATCTATGCCAAACAAAAGCATGGCTGCAAATCCACTTCCCACTCCTGGAGCACTTTTATTGGGGGATTCATTCAACATGAGGCATCCTTTAACTGGAGGAGGAATGACTGTGGCTCTTTCAGACATCGTTCTTCTTCGGGATCTTCTTAGACCCTTACATGATCTCAATGATGCACCTGCCTTGTGCGAATACCTTGAATCATTCTATACATTGCGTAAGCCTATGTCATCTACCATCAACACATTAGCAGATGCCTTGTACAAGGTGTTGTCTGCGTCGCCTGATCCCGCAAGACAAGAAATGCGTGAAGCATGTTTTGGTTATTGGAGCCTTGGAGGTATACGTATCTGTGGTTATGGACCAGTTTCTCTTCTCTCTGGACTTAACCCTCGTCCATCGCACATGTTTCTCCATTTCTTTGCTATTGCTATCTATGGTGTCTGGCGCTTGATGCTTCCATTACCTTCTCCTCAACGCACATGGCTTGCGGTTAGATTGCTCTTGTATGCATCAGGGATCATATTTCCCATTATAATTGGTGAAGGAATTAGACAGACGTTCTTTCCTGCAACAGTGCCGGCATATTACAGAGCTCCTCCTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

520

Amino Acids

56.67

Weight (kDa)

8.21

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 52 - 364 1.5e-18 FAD binding domain
DAO PF01266 53 - 83 1e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 56 - 82 2.5e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 205 - 473 1.2e-111 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1487
AarI CACCTGC 1 cut(s) 1138
AatII GACGTC 2 cut(s) 162, 226
Acc16I TGCGCA 1 cut(s) 334
Acc36I ACCTGC 1 cut(s) 1138
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 152, 557
AccI GTMKAC 1 cut(s) 1294
AccII CGCG 1 cut(s) 228
AciI CCGC 3 cut(s) 92, 1242, 1442
AclWI GGATC 4 cut(s) 422, 1101, 1232, 1478
AcoI YGGCCR 1 cut(s) 864
AcsI RAATTY 1 cut(s) 837
AcuI CTGAAG 1 cut(s) 828
AcyI GRCGYC 2 cut(s) 159, 223
AfaI GTAC 4 cut(s) 17, 97, 154, 1214
AfeI AGCGCT 1 cut(s) 670
AfiI CCNNNNNNNGG 2 cut(s) 998, 1046
AflIII ACRYGT 1 cut(s) 1356
AgsI TTSAA 7 cut(s) 548, 648, 675, 683, 877, 1027, 1151
AjnI CCWGG 4 cut(s) 33, 289, 826, 997
AjuI GAANNNNNNNTTGG 2 cut(s) 1254, 1286
AloI GAACNNNNNNTCC 4 cut(s) 598, 630, 823, 855
AluBI AGCT 9 cut(s) 194, 280, 316, 494, 590, 851, 910, 929, 1547
AluI AGCT 9 cut(s) 194, 280, 316, 494, 590, 851, 910, 929, 1547
Alw21I GWGCWC 2 cut(s) 1006, 1549
Alw26I GTCTC 1 cut(s) 240
AlwI GGATC 4 cut(s) 422, 1101, 1232, 1478
Aor51HI AGCGCT 1 cut(s) 670
AoxI GGCC 2 cut(s) 48, 864
ApeKI GCWGC 6 cut(s) 191, 286, 440, 639, 929, 977
ApoI RAATTY 1 cut(s) 837
Asp718I GGTACC 1 cut(s) 152
AspLEI GCGC 4 cut(s) 176, 335, 671, 1401
AspS9I GGNCC 1 cut(s) 1313
AsuHPI GGTGA 3 cut(s) 287, 869, 1505
AvaII GGWCC 1 cut(s) 1313
BaeGI GKGCMC 1 cut(s) 560
BaeI ACNNNNGTAYC 2 cut(s) 144, 177
BalI TGGCCA 1 cut(s) 866
BanI GGYRCC 2 cut(s) 152, 557
BanII GRGCYC 1 cut(s) 1549
Bbv12I GWGCWC 2 cut(s) 1006, 1549
BbvCI CCTCAGC 1 cut(s) 906
BbvI GCAGC 6 cut(s) 203, 298, 452, 626, 916, 964
BccI CCATC 5 cut(s) 380, 569, 629, 1196, 1357
BciT130I CCWGG 4 cut(s) 35, 291, 828, 999
BcoDI GTCTC 1 cut(s) 240
BfaI CTAG 3 cut(s) 23, 81, 317
BfoI RGCGCY 3 cut(s) 177, 672, 1402
BfuAI ACCTGC 1 cut(s) 1138
BglII AGATCT 1 cut(s) 953
BisI GCNGC 6 cut(s) 192, 287, 441, 640, 930, 978
BlsI GCNGC 6 cut(s) 193, 288, 442, 641, 931, 979
Bme1390I CCNGG 4 cut(s) 35, 291, 828, 999
Bme18I GGWCC 1 cut(s) 1313
BmgT120I GGNCC 1 cut(s) 1313
BmiI GGNNCC 4 cut(s) 154, 559, 891, 1283
BmrFI CCNGG 4 cut(s) 35, 291, 828, 999
BmsI GCATC 7 cut(s) 117, 340, 1045, 1114, 1195, 1395, 1472
BpmI CTGGAG 4 cut(s) 198, 612, 1020, 1068
Bpu10I CCTNAGC 1 cut(s) 906
BpuEI CTTGAG 2 cut(s) 271, 344
BsaAI YACGTR 1 cut(s) 1298
BsaHI GRCGYC 2 cut(s) 159, 223
BsaJI CCNNGG 5 cut(s) 290, 414, 826, 882, 1285
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 2 cut(s) 998, 1046
Bse118I RCCGGY 2 cut(s) 185, 1531
Bse1I ACTGG 2 cut(s) 1051, 1316
Bse3DI GCAATG 1 cut(s) 1163
BseBI CCWGG 4 cut(s) 35, 291, 828, 999
BseDI CCNNGG 5 cut(s) 290, 414, 826, 882, 1285
BseGI GGATG 3 cut(s) 132, 471, 1036
BseLI CCNNNNNNNGG 2 cut(s) 998, 1046
BseMI GCAATG 1 cut(s) 1163
BseMII CTCAG 4 cut(s) 368, 679, 908, 920
BseNI ACTGG 2 cut(s) 1051, 1316
BseRI GAGGAG 7 cut(s) 606, 611, 882, 894, 1065, 1413, 1539
BseSI GKGCMC 1 cut(s) 560
BseXI GCAGC 6 cut(s) 203, 298, 452, 626, 916, 964
BsgI GTGCAG 1 cut(s) 210
Bsh1236I CGCG 1 cut(s) 228
BshFI GGCC 2 cut(s) 50, 866
BshNI GGYRCC 2 cut(s) 152, 557
BsiHKAI GWGCWC 2 cut(s) 1006, 1549
BsiSI CCGG 3 cut(s) 186, 260, 1532
BslFI GGGAC 3 cut(s) 407, 541, 672
BslI CCNNNNNNNGG 2 cut(s) 998, 1046
BsmAI GTCTC 1 cut(s) 240
BsmFI GGGAC 3 cut(s) 407, 541, 672
BsmI GAATGC 1 cut(s) 486
BsnI GGCC 2 cut(s) 50, 866
Bsp1286I GDGCHC 3 cut(s) 560, 1006, 1549
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
BspACI CCGC 3 cut(s) 92, 1242, 1442
BspANI GGCC 2 cut(s) 50, 866
BspCNI CTCAG 4 cut(s) 367, 678, 907, 919
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 4 cut(s) 154, 559, 891, 1283
BspMI ACCTGC 1 cut(s) 1138
BspPI GGATC 4 cut(s) 422, 1101, 1232, 1478
BspT107I GGYRCC 2 cut(s) 152, 557
BsrDI GCAATG 1 cut(s) 1163
BsrFI RCCGGY 2 cut(s) 185, 1531
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 2 cut(s) 1051, 1316
BssAI RCCGGY 2 cut(s) 185, 1531
BssECI CCNNGG 5 cut(s) 290, 414, 826, 882, 1285
BssMI GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
BssNAI GTATAC 1 cut(s) 1295
BssNI GRCGYC 2 cut(s) 159, 223
BssT1I CCWWGG 2 cut(s) 414, 1285
Bst1107I GTATAC 1 cut(s) 1295
Bst2UI CCWGG 4 cut(s) 35, 291, 828, 999
Bst4CI ACNGT 6 cut(s) 107, 532, 722, 883, 1063, 1528
Bst6I CTCTTC 3 cut(s) 138, 507, 1329
BstACI GRCGYC 2 cut(s) 159, 223
BstAPI GCANNNNNTGC 1 cut(s) 197
BstAUI TGTACA 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 1298
BstC8I GCNNGC 4 cut(s) 48, 230, 1440, 1533
BstDEI CTNAG 6 cut(s) 213, 354, 665, 894, 906, 1100
BstDSI CCRYGG 1 cut(s) 882
BstF5I GGATG 3 cut(s) 132, 471, 1036
BstFNI CGCG 1 cut(s) 228
BstH2I RGCGCY 3 cut(s) 177, 672, 1402
BstHHI GCGC 4 cut(s) 176, 335, 671, 1401
BstKTI GATC 7 cut(s) 312, 430, 956, 1096, 1117, 1240, 1473
BstMAI GTCTC 1 cut(s) 240
BstMBI GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
BstMWI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 286, 1405
BstNI CCWGG 4 cut(s) 35, 291, 828, 999
BstNSI RCATGY 4 cut(s) 236, 737, 1269, 1360
BstSCI CCNGG 4 cut(s) 33, 289, 826, 997
BstSLI GKGCMC 1 cut(s) 560
BstSNI TACGTA 1 cut(s) 1298
BstUI CGCG 1 cut(s) 228
BstV1I GCAGC 6 cut(s) 203, 298, 452, 626, 916, 964
BstX2I RGATCY 2 cut(s) 953, 1093
BstYI RGATCY 2 cut(s) 953, 1093
BstZ17I GTATAC 1 cut(s) 1295
BsuRI GGCC 2 cut(s) 50, 866
BtgI CCRYGG 1 cut(s) 882
BtgZI GCGATG 1 cut(s) 1335
BtsCI GGATG 3 cut(s) 132, 471, 1036
BtsIMutI CAGTG 3 cut(s) 112, 537, 1533
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 4 cut(s) 48, 230, 1440, 1533
CciI TCATGA 1 cut(s) 63
CfoI GCGC 4 cut(s) 176, 335, 671, 1401
Cfr10I RCCGGY 2 cut(s) 185, 1531
Cfr13I GGNCC 1 cut(s) 1313
CseI GACGC 1 cut(s) 1218
Csp6I GTAC 4 cut(s) 16, 96, 153, 1213
CviQI GTAC 4 cut(s) 16, 96, 153, 1213
DdeI CTNAG 6 cut(s) 213, 354, 665, 894, 906, 1100
DpnI GATC 7 cut(s) 311, 429, 955, 1095, 1116, 1239, 1472
DpnII GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
EaeI YGGCCR 1 cut(s) 864
Eam1104I CTCTTC 3 cut(s) 138, 507, 1329
EarI CTCTTC 3 cut(s) 138, 507, 1329
Ecl136II GAGCTC 1 cut(s) 1547
Eco105I TACGTA 1 cut(s) 1298
Eco130I CCWWGG 2 cut(s) 414, 1285
Eco24I GRGCYC 1 cut(s) 1549
Eco32I GATATC 1 cut(s) 823
Eco47I GGWCC 1 cut(s) 1313
Eco47III AGCGCT 1 cut(s) 670
Eco53kI GAGCTC 1 cut(s) 1547
Eco57I CTGAAG 1 cut(s) 828
EcoICRI GAGCTC 1 cut(s) 1547
EcoRII CCWGG 4 cut(s) 33, 289, 826, 997
EcoRV GATATC 1 cut(s) 823
EcoT14I CCWWGG 2 cut(s) 414, 1285
EcoT22I ATGCAT 1 cut(s) 1465
EcoT38I GRGCYC 1 cut(s) 1549
ErhI CCWWGG 2 cut(s) 414, 1285
FaqI GGGAC 3 cut(s) 407, 541, 672
FauI CCCGC 2 cut(s) 85, 1249
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 1 cut(s) 1294
Fnu4HI GCNGC 6 cut(s) 192, 287, 441, 640, 930, 978
FokI GGATG 3 cut(s) 139, 458, 1023
FriOI GRGCYC 1 cut(s) 1549
Fsp4HI GCNGC 6 cut(s) 192, 287, 441, 640, 930, 978
FspBI CTAG 3 cut(s) 23, 81, 317
FspI TGCGCA 1 cut(s) 334
GlaI GCGC 4 cut(s) 175, 334, 670, 1400
GluI GCNGC 6 cut(s) 192, 287, 441, 640, 930, 978
GsuI CTGGAG 4 cut(s) 198, 612, 1020, 1068
HaeII RGCGCY 3 cut(s) 177, 672, 1402
HaeIII GGCC 2 cut(s) 50, 866
HapII CCGG 3 cut(s) 186, 260, 1532
HgaI GACGC 1 cut(s) 1218
HhaI GCGC 4 cut(s) 176, 335, 671, 1401
Hin1I GRCGYC 2 cut(s) 159, 223
Hin6I GCGC 4 cut(s) 174, 333, 669, 1399
HinP1I GCGC 4 cut(s) 174, 333, 669, 1399
HinfI GANTC 6 cut(s) 30, 341, 805, 898, 1019, 1151
HpaII CCGG 3 cut(s) 186, 260, 1532
HphI GGTGA 3 cut(s) 287, 869, 1505
Hpy166II GTNNAC 2 cut(s) 58, 1295
Hpy188I TCNGA 3 cut(s) 357, 897, 1075
Hpy188III TCNNGA 6 cut(s) 64, 124, 323, 431, 1091, 1332
Hpy8I GTNNAC 2 cut(s) 58, 1295
Hpy99I CGWCG 4 cut(s) 161, 164, 228, 1234
HpyAV CCTTC 7 cut(s) 212, 352, 737, 777, 852, 1428, 1490
HpyCH4III ACNGT 6 cut(s) 107, 532, 722, 883, 1063, 1528
HpyCH4IV ACGT 5 cut(s) 18, 159, 223, 1297, 1511
HpyCH4V TGCA 9 cut(s) 191, 232, 286, 737, 932, 980, 1127, 1463, 1523
HpyF10VI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 286, 1405
HpyF3I CTNAG 6 cut(s) 213, 354, 665, 894, 906, 1100
HpySE526I ACGT 5 cut(s) 18, 159, 223, 1297, 1511
Hsp92I GRCGYC 2 cut(s) 159, 223
HspAI GCGC 4 cut(s) 174, 333, 669, 1399
KpnI GGTACC 1 cut(s) 156
KroI GCCGGC 1 cut(s) 1531
KroNI GCCGGC 1 cut(s) 1533
Kzo9I GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
LmnI GCTCC 5 cut(s) 619, 895, 1001, 1281, 1552
Lsp1109I GCAGC 6 cut(s) 203, 298, 452, 626, 916, 964
LweI GCATC 7 cut(s) 117, 340, 1045, 1114, 1195, 1395, 1472
MaeI CTAG 3 cut(s) 23, 81, 317
MaeII ACGT 5 cut(s) 18, 159, 223, 1297, 1511
MaeIII GTNAC 2 cut(s) 532, 722
MalI GATC 7 cut(s) 311, 429, 955, 1095, 1116, 1239, 1472
MboI GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
MboII GAAGA 7 cut(s) 155, 494, 560, 1076, 1079, 1088, 1316
MfeI CAATTG 1 cut(s) 933
MflI RGATCY 2 cut(s) 953, 1093
MhlI GDGCHC 3 cut(s) 560, 1006, 1549
MlsI TGGCCA 1 cut(s) 866
MluNI TGGCCA 1 cut(s) 866
MlyI GAGTC 1 cut(s) 39
Mox20I TGGCCA 1 cut(s) 866
Mph1103I ATGCAT 1 cut(s) 1465
MroNI GCCGGC 1 cut(s) 1531
MscI TGGCCA 1 cut(s) 866
MseI TTAA 3 cut(s) 1043, 1338, 1558
MslI CAYNNNNRTG 1 cut(s) 747
Msp20I TGGCCA 1 cut(s) 866
MspI CCGG 3 cut(s) 186, 260, 1532
MspR9I CCNGG 4 cut(s) 35, 291, 828, 999
MunI CAATTG 1 cut(s) 933
Mva1269I GAATGC 1 cut(s) 486
MvaI CCWGG 4 cut(s) 35, 291, 828, 999
MvnI CGCG 1 cut(s) 228
MwoI GCNNNNNNNGC 5 cut(s) 182, 191, 197, 286, 1405
NaeI GCCGGC 1 cut(s) 1533
NdeI CATATG 1 cut(s) 610
NdeII GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
NgoMIV GCCGGC 1 cut(s) 1531
NlaIV GGNNCC 4 cut(s) 154, 559, 891, 1283
NmuCI GTSAC 2 cut(s) 532, 722
NsbI TGCGCA 1 cut(s) 334
NsiI ATGCAT 1 cut(s) 1465
NspI RCATGY 4 cut(s) 236, 737, 1269, 1360
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 1 cut(s) 1138
PciI ACATGT 1 cut(s) 1356
PctI GAATGC 1 cut(s) 486
PdiI GCCGGC 1 cut(s) 1533
PfeI GAWTC 5 cut(s) 341, 805, 898, 1019, 1151
PflFI GACNNNGTC 1 cut(s) 161
PfoI TCCNGGA 1 cut(s) 997
PkrI GCNGC 6 cut(s) 193, 288, 442, 641, 931, 979
PleI GAGTC 1 cut(s) 38
PpsI GAGTC 1 cut(s) 38
Ppu21I YACGTR 1 cut(s) 1298
PscI ACATGT 1 cut(s) 1356
PsiI TTATAA 1 cut(s) 1487
Psp124BI GAGCTC 1 cut(s) 1549
Psp6I CCWGG 4 cut(s) 33, 289, 826, 997
PspGI CCWGG 4 cut(s) 33, 289, 826, 997
PspN4I GGNNCC 4 cut(s) 154, 559, 891, 1283
PspPI GGNCC 1 cut(s) 1313
PsuI RGATCY 2 cut(s) 953, 1093
PsyI GACNNNGTC 1 cut(s) 161
RsaI GTAC 4 cut(s) 17, 97, 154, 1214
RsaNI GTAC 4 cut(s) 16, 96, 153, 1213
RseI CAYNNNNRTG 1 cut(s) 747
SacI GAGCTC 1 cut(s) 1549
SaqAI TTAA 3 cut(s) 1043, 1338, 1558
SatI GCNGC 6 cut(s) 192, 287, 441, 640, 930, 978
Sau3AI GATC 7 cut(s) 309, 427, 953, 1093, 1114, 1237, 1470
Sau96I GGNCC 1 cut(s) 1313
SchI GAGTC 1 cut(s) 39
ScrFI CCNGG 4 cut(s) 35, 291, 828, 999
SduI GDGCHC 3 cut(s) 560, 1006, 1549
SfaNI GCATC 7 cut(s) 117, 340, 1045, 1114, 1195, 1395, 1472
SinI GGWCC 1 cut(s) 1313
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 2 cut(s) 250, 323
SmoI CTYRAG 2 cut(s) 250, 323
SnaBI TACGTA 1 cut(s) 1298
SsiI CCGC 3 cut(s) 92, 1242, 1442
SspMI CTAG 3 cut(s) 23, 81, 317
SstI GAGCTC 1 cut(s) 1549
StyD4I CCNGG 4 cut(s) 33, 289, 826, 997
StyI CCWWGG 2 cut(s) 414, 1285
TaaI ACNGT 6 cut(s) 107, 532, 722, 883, 1063, 1528
TaiI ACGT 5 cut(s) 21, 162, 226, 1300, 1514
TaqI TCGA 2 cut(s) 240, 312
TatI WGTACW 1 cut(s) 1212
TfiI GAWTC 5 cut(s) 341, 805, 898, 1019, 1151
Tru1I TTAA 3 cut(s) 1043, 1338, 1558
Tru9I TTAA 3 cut(s) 1043, 1338, 1558
TscAI CASTG 3 cut(s) 112, 537, 1533
TseFI GTSAC 2 cut(s) 532, 722
TseI GCWGC 6 cut(s) 191, 286, 440, 639, 929, 977
Tsp45I GTSAC 2 cut(s) 532, 722
TspDTI ATGAA 5 cut(s) 156, 354, 460, 697, 1011
TspRI CASTG 3 cut(s) 112, 537, 1533
Tth111I GACNNNGTC 1 cut(s) 161
VpaK11BI GGWCC 1 cut(s) 1313
XapI RAATTY 1 cut(s) 837
XceI RCATGY 4 cut(s) 236, 737, 1269, 1360
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XmiI GTMKAC 1 cut(s) 1294
XspI CTAG 3 cut(s) 23, 81, 317
ZraI GACGTC 2 cut(s) 160, 224
Zsp2I ATGCAT 1 cut(s) 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.