Rroxscaffold_7G00214390

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000108
Physical Location & Seq
Reverse (-)
65038659 .. 65041671
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00214390.1

Sequence Viewer

Length: 1605 bp
ATGGATTACCTGTATACAACAGGAGCAGTCATAGCTTCATTGTTGAGTATTGTTTTCTTATACACTTTTAGAGGGAAGAGGAAGAATGTCAAAGCTTCAACGAAGACTCAAAATGGGAAACTTTTGAAGAGCTCTGGAAATGGAATGTGTTTGCCGGCAAAGATGGGTGCAAGTCCTGACATTGTCATTGTTGGTGCTGGAGTTGTTGGTTCGGCACTCGCTTATACTCTTGGGAAGGATGGCCGCCAAGTGCATGTGATTGAAAGAGACTTGACTGAACCAGATAGAATTGTTGGTGAACTGCTACAACCTGGGGGATATCTGAGATTGATTGAGTTGGGCCTTGAAGATTGTGTGAATGAGATTGATGCTCAGAGAGTTTTTGGCTATGCGCTTTACAAGGATGGGAAAAGTTCCAAGCTGCCATATCCCTTGGAAAACTTCCATCCAGATGTGGCTGGCAGAAGCTTTCACCATGGCCGTTTCATTCAAAGGATGCGTGAAAAAGCTGCATCTCTTCCCAATGTAAGATTGGAACAAGGCACAGTGACATCTCTGCTTGAAGAACAGGGTACTGTCAAAGGGGTCCAATACAAATCCAAAGGCAGTGATCAGGAGCTCACCGCACACGCTCCCCTCACAATAGTCTGTGATGGTTGCTATTCAAACTTGCGACGCTCTCTCTGTGATGCGAAGGTTGATATTCCTTCATGTTTTGTTGGTTTAGTTCTTGAGAATTGCCAGCTACCATACGCAAATCATGGGCATGTGATATTAGCAGATCCTTCACCGATGCTTTTTTATCCTATCAGCAGCACCGAGATTCGCTGCCTGGTTGATGTACCAGGCCAGAAAGTGCCTTCAATTTCCAGTGGTGATATGGCTCACTACTTGAAAGCAAAAGTGGCACCCCAAGTTCCACTTGAGCTGCATGCCGCTTTCTTGGCTGCCATTGATAATGGAAACATAAAATCAATGCCGAACAGAAGCATGCCTGCTGCTCCTCATCCCACCCCTGGTGCCTTTCTAATGGGGGATGCAGTCAATATGCGCCATCCTTTAACTGGAGGAGGCATGACTGTGGCTCTATCGGACATTGTGGTTGTTAGGGATCTTCTAAGACCTCTGGACAATCTCAATGATGCATCAGCTCTTTGCAAATACCTCGAGTCATTCTATACTCTTCGTAAGCCTGTGTCTTCTACCATAAACACATTGGCAGGTGCTCTATACAAGGTGTTCTGTGCATCTCCTGATCCAGCAAGGAAAGAAATGAGGGAAGCATGCTTTGACTACTTGAGTCTTGGTGGCATGTTTTCCAATGGACCTCTGGCTCTTCTCTCTGGTCTAAACCCTCATCCATTGAGCTTGATTCTCCACTTCTTTGCTGTGGCTATCTACGCTGTTGGGCGGCTGTTACTTCCATTCCCTTCACCCAAACGCATGTGGATTGGAGCTAGATTGATTTTGGGTGCATCAGGGATCATTTTCCTGATAATCAGCGCTGAAGGAGTAAGACAAATGTTCTTCCCTGTAATGGTTCCATCCTATCACAGAGCTCCTCCAGTTAATTTACATGACTTTGATAACAAGGCAATCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

534

Amino Acids

58.06

Weight (kDa)

8.89

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 60 - 369 6.8e-17 FAD binding domain
DAO PF01266 60 - 90 3.6e-06 FAD dependent oxidoreductase
SE PF08491 210 - 483 5.2e-118 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1211
Acc36I ACCTGC 1 cut(s) 1211
AccB1I GGYRCC 2 cut(s) 907, 1019
AccI GTMKAC 1 cut(s) 14
AciI CCGC 4 cut(s) 244, 624, 936, 1411
AclWI GGATC 4 cut(s) 776, 1119, 1250, 1490
AcoI YGGCCR 2 cut(s) 241, 478
AcuI CTGAAG 1 cut(s) 1527
AfaI GTAC 2 cut(s) 574, 843
AfeI AGCGCT 1 cut(s) 1504
AfiI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
AgsI TTSAA 9 cut(s) 99, 127, 263, 347, 491, 563, 666, 864, 895
AjnI CCWGG 4 cut(s) 310, 831, 844, 1015
Alw21I GWGCWC 4 cut(s) 134, 621, 1228, 1561
Alw26I GTCTC 1 cut(s) 261
AlwI GGATC 4 cut(s) 776, 1119, 1250, 1490
Ama87I CYCGRG 1 cut(s) 1166
Aor51HI AGCGCT 1 cut(s) 1504
AoxI GGCC 4 cut(s) 241, 340, 478, 847
ApeKI GCWGC 7 cut(s) 421, 509, 813, 828, 928, 947, 998
AspLEI GCGC 3 cut(s) 394, 1053, 1505
AspS9I GGNCC 3 cut(s) 340, 586, 1325
AsuHPI GGTGA 6 cut(s) 308, 464, 613, 780, 887, 1425
AvaI CYCGRG 1 cut(s) 1166
AvaII GGWCC 2 cut(s) 586, 1325
BanI GGYRCC 2 cut(s) 907, 1019
BanII GRGCYC 3 cut(s) 134, 621, 1561
BbsI GAAGAC 2 cut(s) 110, 1191
Bbv12I GWGCWC 4 cut(s) 134, 621, 1228, 1561
BbvI GCAGC 7 cut(s) 408, 496, 815, 825, 915, 934, 985
BccI CCATC 7 cut(s) 157, 233, 398, 453, 647, 1062, 1552
BceAI ACGGC 1 cut(s) 465
BcgI CGANNNNNNTGC 2 cut(s) 1147, 1181
BciT130I CCWGG 4 cut(s) 312, 833, 846, 1017
BclI TGATCA 1 cut(s) 610
BcoDI GTCTC 1 cut(s) 261
BfaI CTAG 1 cut(s) 1458
BfoI RGCGCY 1 cut(s) 1506
BfuAI ACCTGC 1 cut(s) 1211
Bme1390I CCNGG 4 cut(s) 312, 833, 846, 1017
Bme18I GGWCC 2 cut(s) 586, 1325
BmeT110I CYCGRG 1 cut(s) 1166
BmgT120I GGNCC 3 cut(s) 340, 586, 1325
BmiI GGNNCC 4 cut(s) 587, 909, 1021, 1542
BmrFI CCNGG 4 cut(s) 312, 833, 846, 1017
BpiI GAAGAC 2 cut(s) 110, 1191
BpmI CTGGAG 3 cut(s) 219, 1086, 1548
BpuEI CTTGAG 3 cut(s) 752, 944, 1318
BsaJI CCNNGG 4 cut(s) 311, 432, 475, 1015
Bsc4I CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
Bse118I RCCGGY 1 cut(s) 154
Bse1I ACTGG 3 cut(s) 870, 1069, 1565
BseBI CCWGG 4 cut(s) 312, 833, 846, 1017
BseDI CCNNGG 4 cut(s) 311, 432, 475, 1015
BseGI GGATG 9 cut(s) 244, 409, 445, 501, 1006, 1042, 1054, 1357, 1544
BseLI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
BseMII CTCAG 2 cut(s) 314, 386
BseNI ACTGG 3 cut(s) 870, 1069, 1565
BseRI GAGGAG 3 cut(s) 993, 1083, 1551
BseXI GCAGC 7 cut(s) 408, 496, 815, 825, 915, 934, 985
BshFI GGCC 4 cut(s) 243, 342, 480, 849
BshNI GGYRCC 2 cut(s) 907, 1019
BsiHKAI GWGCWC 4 cut(s) 134, 621, 1228, 1561
BsiHKCI CYCGRG 1 cut(s) 1166
BsiSI CCGG 1 cut(s) 155
BslI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
BsmAI GTCTC 1 cut(s) 261
BsnI GGCC 4 cut(s) 243, 342, 480, 849
BsoBI CYCGRG 1 cut(s) 1166
Bsp1286I GDGCHC 4 cut(s) 134, 621, 1228, 1561
Bsp143I GATC 5 cut(s) 610, 781, 1111, 1255, 1482
Bsp19I CCATGG 1 cut(s) 475
BspACI CCGC 4 cut(s) 244, 624, 936, 1411
BspANI GGCC 4 cut(s) 243, 342, 480, 849
BspCNI CTCAG 2 cut(s) 315, 385
BspLI GGNNCC 4 cut(s) 587, 909, 1021, 1542
BspMI ACCTGC 1 cut(s) 1211
BspPI GGATC 4 cut(s) 776, 1119, 1250, 1490
BspQI GCTCTTC 2 cut(s) 122, 1341
BspT107I GGYRCC 2 cut(s) 907, 1019
BsrFI RCCGGY 1 cut(s) 154
BsrI ACTGG 3 cut(s) 870, 1069, 1565
BssAI RCCGGY 1 cut(s) 154
BssECI CCNNGG 4 cut(s) 311, 432, 475, 1015
BssMI GATC 5 cut(s) 610, 781, 1111, 1255, 1482
BssNAI GTATAC 1 cut(s) 15
BssT1I CCWWGG 2 cut(s) 432, 475
Bst1107I GTATAC 1 cut(s) 15
Bst2UI CCWGG 4 cut(s) 312, 833, 846, 1017
Bst4CI ACNGT 3 cut(s) 547, 577, 1081
Bst6I CTCTTC 5 cut(s) 71, 122, 522, 1188, 1341
BstC8I GCNNGC 7 cut(s) 156, 460, 743, 933, 992, 996, 1285
BstDEI CTNAG 3 cut(s) 323, 372, 1118
BstDSI CCRYGG 1 cut(s) 475
BstF5I GGATG 9 cut(s) 244, 409, 445, 501, 1006, 1042, 1054, 1357, 1544
BstH2I RGCGCY 1 cut(s) 1506
BstHHI GCGC 3 cut(s) 394, 1053, 1505
BstKTI GATC 5 cut(s) 613, 784, 1114, 1258, 1485
BstMAI GTCTC 1 cut(s) 261
BstMBI GATC 5 cut(s) 610, 781, 1111, 1255, 1482
BstMWI GCNNNNNNNGC 4 cut(s) 32, 905, 944, 1400
BstNI CCWGG 4 cut(s) 312, 833, 846, 1017
BstNSI RCATGY 7 cut(s) 257, 770, 935, 994, 1287, 1315, 1447
BstSCI CCNGG 4 cut(s) 310, 831, 844, 1015
BstV1I GCAGC 7 cut(s) 408, 496, 815, 825, 915, 934, 985
BstV2I GAAGAC 2 cut(s) 110, 1191
BstX2I RGATCY 2 cut(s) 781, 1111
BstYI RGATCY 2 cut(s) 781, 1111
BstZ17I GTATAC 1 cut(s) 15
BsuRI GGCC 4 cut(s) 243, 342, 480, 849
BtgI CCRYGG 1 cut(s) 475
BtsCI GGATG 9 cut(s) 244, 409, 445, 501, 1006, 1042, 1054, 1357, 1544
BtsI GCAGTG 1 cut(s) 613
BtsIMutI CAGTG 3 cut(s) 552, 613, 877
BveI ACCTGC 1 cut(s) 1211
Cac8I GCNNGC 7 cut(s) 156, 460, 743, 933, 992, 996, 1285
CfoI GCGC 3 cut(s) 394, 1053, 1505
Cfr10I RCCGGY 1 cut(s) 154
Cfr13I GGNCC 3 cut(s) 340, 586, 1325
CseI GACGC 1 cut(s) 684
Csp6I GTAC 2 cut(s) 573, 842
CviQI GTAC 2 cut(s) 573, 842
DdeI CTNAG 3 cut(s) 323, 372, 1118
DpnI GATC 5 cut(s) 612, 783, 1113, 1257, 1484
DpnII GATC 5 cut(s) 610, 781, 1111, 1255, 1482
EaeI YGGCCR 2 cut(s) 241, 478
Eam1104I CTCTTC 5 cut(s) 71, 122, 522, 1188, 1341
EarI CTCTTC 5 cut(s) 71, 122, 522, 1188, 1341
Ecl136II GAGCTC 3 cut(s) 132, 619, 1559
Eco130I CCWWGG 2 cut(s) 432, 475
Eco24I GRGCYC 3 cut(s) 134, 621, 1561
Eco32I GATATC 1 cut(s) 320
Eco47I GGWCC 2 cut(s) 586, 1325
Eco47III AGCGCT 1 cut(s) 1504
Eco53kI GAGCTC 3 cut(s) 132, 619, 1559
Eco57I CTGAAG 1 cut(s) 1527
Eco88I CYCGRG 1 cut(s) 1166
EcoICRI GAGCTC 3 cut(s) 132, 619, 1559
EcoRII CCWGG 4 cut(s) 310, 831, 844, 1015
EcoRV GATATC 1 cut(s) 320
EcoT14I CCWWGG 2 cut(s) 432, 475
EcoT22I ATGCAT 1 cut(s) 1147
EcoT38I GRGCYC 3 cut(s) 134, 621, 1561
ErhI CCWWGG 2 cut(s) 432, 475
FalI AAGNNNNNCTT 2 cut(s) 906, 938
FbaI TGATCA 1 cut(s) 610
FblI GTMKAC 1 cut(s) 14
FokI GGATG 9 cut(s) 251, 416, 432, 508, 993, 1041, 1049, 1344, 1531
FriOI GRGCYC 3 cut(s) 134, 621, 1561
FspBI CTAG 1 cut(s) 1458
GlaI GCGC 3 cut(s) 393, 1052, 1504
GsuI CTGGAG 3 cut(s) 219, 1086, 1548
HaeII RGCGCY 1 cut(s) 1506
HaeIII GGCC 4 cut(s) 243, 342, 480, 849
HapII CCGG 1 cut(s) 155
HgaI GACGC 1 cut(s) 684
HhaI GCGC 3 cut(s) 394, 1053, 1505
Hin6I GCGC 3 cut(s) 392, 1051, 1503
HinP1I GCGC 3 cut(s) 392, 1051, 1503
HindIII AAGCTT 2 cut(s) 93, 466
HinfI GANTC 5 cut(s) 106, 823, 1169, 1300, 1372
HpaII CCGG 1 cut(s) 155
HphI GGTGA 6 cut(s) 308, 464, 613, 780, 887, 1425
Hpy166II GTNNAC 2 cut(s) 15, 299
Hpy188I TCNGA 4 cut(s) 324, 375, 1093, 1601
Hpy188III TCNNGA 8 cut(s) 135, 176, 449, 614, 731, 1127, 1253, 1492
Hpy8I GTNNAC 2 cut(s) 15, 299
Hpy99I CGWCG 1 cut(s) 678
HpyAV CCTTC 7 cut(s) 229, 688, 717, 795, 870, 1440, 1502
HpyCH4III ACNGT 3 cut(s) 547, 577, 1081
HpyCH4V TGCA 9 cut(s) 170, 253, 512, 931, 1040, 1145, 1158, 1247, 1475
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 905, 944, 1400
HpyF3I CTNAG 3 cut(s) 323, 372, 1118
HspAI GCGC 3 cut(s) 392, 1051, 1503
KroI GCCGGC 1 cut(s) 154
KroNI GCCGGC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 610
Kzo9I GATC 5 cut(s) 610, 781, 1111, 1255, 1482
LguI GCTCTTC 2 cut(s) 122, 1341
LmnI GCTCC 6 cut(s) 23, 616, 637, 1006, 1454, 1564
Lsp1109I GCAGC 7 cut(s) 408, 496, 815, 825, 915, 934, 985
MaeI CTAG 1 cut(s) 1458
MaeIII GTNAC 2 cut(s) 547, 1416
MalI GATC 5 cut(s) 612, 783, 1113, 1257, 1484
MboI GATC 5 cut(s) 610, 781, 1111, 1255, 1482
MflI RGATCY 2 cut(s) 781, 1111
MhlI GDGCHC 4 cut(s) 134, 621, 1228, 1561
MluCI AATT 4 cut(s) 288, 736, 864, 1570
MlyI GAGTC 3 cut(s) 100, 1178, 1309
Mph1103I ATGCAT 1 cut(s) 1147
MroNI GCCGGC 1 cut(s) 154
MseI TTAA 2 cut(s) 1061, 1569
MslI CAYNNNNRTG 3 cut(s) 450, 765, 1079
MspI CCGG 1 cut(s) 155
MspR9I CCNGG 4 cut(s) 312, 833, 846, 1017
MvaI CCWGG 4 cut(s) 312, 833, 846, 1017
MwoI GCNNNNNNNGC 4 cut(s) 32, 905, 944, 1400
NaeI GCCGGC 1 cut(s) 156
NcoI CCATGG 1 cut(s) 475
NdeII GATC 5 cut(s) 610, 781, 1111, 1255, 1482
NgoMIV GCCGGC 1 cut(s) 154
NlaIV GGNNCC 4 cut(s) 587, 909, 1021, 1542
NmuCI GTSAC 1 cut(s) 547
NsiI ATGCAT 1 cut(s) 1147
NspI RCATGY 7 cut(s) 257, 770, 935, 994, 1287, 1315, 1447
PaeI GCATGC 3 cut(s) 935, 994, 1287
PaeR7I CTCGAG 1 cut(s) 1166
PaqCI CACCTGC 1 cut(s) 1211
PciSI GCTCTTC 2 cut(s) 122, 1341
PdiI GCCGGC 1 cut(s) 156
PfeI GAWTC 2 cut(s) 823, 1372
PflFI GACNNNGTC 1 cut(s) 182
PleI GAGTC 3 cut(s) 100, 1177, 1308
PpsI GAGTC 3 cut(s) 100, 1177, 1308
Psp124BI GAGCTC 3 cut(s) 134, 621, 1561
Psp6I CCWGG 4 cut(s) 310, 831, 844, 1015
PspGI CCWGG 4 cut(s) 310, 831, 844, 1015
PspN4I GGNNCC 4 cut(s) 587, 909, 1021, 1542
PspPI GGNCC 3 cut(s) 340, 586, 1325
PspXI VCTCGAGB 1 cut(s) 1166
PsuI RGATCY 2 cut(s) 781, 1111
PsyI GACNNNGTC 1 cut(s) 182
RsaI GTAC 2 cut(s) 574, 843
RsaNI GTAC 2 cut(s) 573, 842
RseI CAYNNNNRTG 3 cut(s) 450, 765, 1079
SacI GAGCTC 3 cut(s) 134, 621, 1561
SapI GCTCTTC 2 cut(s) 122, 1341
SaqAI TTAA 2 cut(s) 1061, 1569
Sau3AI GATC 5 cut(s) 610, 781, 1111, 1255, 1482
Sau96I GGNCC 3 cut(s) 340, 586, 1325
SchI GAGTC 3 cut(s) 100, 1178, 1309
ScrFI CCNGG 4 cut(s) 312, 833, 846, 1017
SduI GDGCHC 4 cut(s) 134, 621, 1228, 1561
Sfr274I CTCGAG 1 cut(s) 1166
SinI GGWCC 2 cut(s) 586, 1325
SlaI CTCGAG 1 cut(s) 1166
SmiMI CAYNNNNRTG 3 cut(s) 450, 765, 1079
SmlI CTYRAG 4 cut(s) 731, 923, 1166, 1297
SmoI CTYRAG 4 cut(s) 731, 923, 1166, 1297
SphI GCATGC 3 cut(s) 935, 994, 1287
Sse9I AATT 4 cut(s) 288, 736, 864, 1570
SsiI CCGC 4 cut(s) 244, 624, 936, 1411
SspMI CTAG 1 cut(s) 1458
SstI GAGCTC 3 cut(s) 134, 621, 1561
StyD4I CCNGG 4 cut(s) 310, 831, 844, 1015
StyI CCWWGG 2 cut(s) 432, 475
TaaI ACNGT 3 cut(s) 547, 577, 1081
TaqI TCGA 1 cut(s) 1167
TasI AATT 4 cut(s) 288, 736, 864, 1570
TauI GCSGC 3 cut(s) 246, 938, 1414
TfiI GAWTC 2 cut(s) 823, 1372
Tru1I TTAA 2 cut(s) 1061, 1569
Tru9I TTAA 2 cut(s) 1061, 1569
TscAI CASTG 3 cut(s) 552, 613, 877
TseFI GTSAC 1 cut(s) 547
TseI GCWGC 7 cut(s) 421, 509, 813, 828, 928, 947, 998
Tsp45I GTSAC 1 cut(s) 547
TspDTI ATGAA 3 cut(s) 27, 475, 699
TspRI CASTG 3 cut(s) 552, 613, 877
Tth111I GACNNNGTC 1 cut(s) 182
VpaK11BI GGWCC 2 cut(s) 586, 1325
XceI RCATGY 7 cut(s) 257, 770, 935, 994, 1287, 1315, 1447
XcmI CCANNNNNNNNNTGG 5 cut(s) 529, 877, 1061, 1213, 1327
XhoI CTCGAG 1 cut(s) 1166
XmiI GTMKAC 1 cut(s) 14
XspI CTAG 1 cut(s) 1458
Zsp2I ATGCAT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.