Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000108

Physical Location & Seq

Genomic Coordinates Forward (+)

10654454 .. 10660478

Gene Structure 6025 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGCAACTACACAAACCAATCTTCCAGACTCATCTTCCACCACAACCAAGCTCACAGCTTTTTGCTCAGACCCATCTTCCCCATAAAACTCACCTTCCCTCAATCTCTCTCTGCTTCCATAAACCCACAACACCCGAAAGCTTAACCAGTTCCACCTGCATTCTGACACAAACAGAGAAGAGAACCAAACAAGGGCATTCTCCTTCTTCTTCTTGTTCTTATTCTTCGTCTGGGTCTTGTAATTCATCTTTTAATTCAAAGATGGCGACAATGATGGCGATCGATCCGCACGTTGTCTGGACATTCCTGGCTTCTTTATTGGGTTTCCTTCTTCTCTTCCTTCTCCGTCGCCGGAATTACGGTAATGCCACCGCCAAGGACAAAGGAAATGTTAAAAACAAGAACAAGACGAGCGAGGATCATGTTTCAGAAGAATGTCTGAAGAGCTCCGGCACTGACGTCATCATCGTCGGCGCCGGGGTTGCTGGCGCTGCTCTTGCACACACCCTAGGAAAGGAGGGAAGACGTGTTCGTGTGATTGAAAGAGACTTGACAGAGCCGGATCGAATTGTTGGGGAACTTCTCCAGCCCGGGGGGTACCTGAAACTGATTGACTTGGGACTTGAAGATTGTGTTGAGGAAATCGATGCTCAGCGAGTTCTTGGATATGCTCTTTTTAAGGATGGGAAGAATACTACGCTGTCCTATCCCCTGGAACAGTTCCATTCAGATGTGGCGGGTAGAAGTTTCCACAATGGACGGTTCATACAGAGGATGAGAGAAAAAGCTGCCACTCTTCCCAATGTACAATTGGAGCAAGGTACAGTCACATCTCTGCTTGAAGAAAATGGGATAATTAAGGGGGTTCAGTACAAAACCAAGGATGGTCAAGAACTTCAAGCTCATGCTCCACTTACGATTGTCTGTGATGGTTGCTTCTCAAATCTGCGCCGCACTCTTTGCAAGCCTCAGGTAGAGGCGCCTTCTTGTTTTGTGGGATTAATTTTGGAAAATTGTGAACTCCCATTTATAAATCACGGGCATGTTATTCTAGCTGATCCATCTCCGATCCTGTTTTACCAAATCAGTAGTACAGAGGTCCGCTGTTTAGTTGATGTGCCTGGCCAGAAAGTACCACCCATCGCCAATGGGGCAATGGCTAACTATTTGAAGAATGTGGTAGCTCCACAGCTTCCACCTGAACTTCATGATCCCTTCGTATCTGCAATTGACAAAGGAAATATTAGAACTATGCCGAATAGAAGCATGCCGGCCAATCCACAGCCAACTCCTGGAGCACTTTTAATGGGCGATGCTTTCAATATGCGTCATCCTTTAACTGGTGGAGGAATGACTGTGGCACTATCAGACATTGTTATACTCAGGGATCTTCTTAAGCCATTACGTGATATAAATGATGCTCCTTCGTTGTGCAACTACCTAGAATCCTTTTATACCTTGCGCAAGCCGGTTTCATCTACGATAAACACCCTGGCAGGTGCCCTATACAAGGTGTTCTCTGCCTCCCCTGACCAAGCAAGGAAGGAGATGCGCCAAGCATGTTTTGACTATCTGAGCCTTGGAGGTGCCTGTTCAACTGGACCAGTGGCTCTGCTCTCTGGTCTAAATCCTCGCCCGCTGAGTTTAGTTCTCCATTTTTTTGCTGTTGCGATATATGGTGTTGGACGTTTGCTTCTACCATTTCCTTCACCAAAACGCATCTGGATTGGAGTGAGATTAATTTGGGGCGCAGCAGGCATAATATTTCCCATCATCAAGGCAGAAGGTGTGAGACAGATGTTCTTTCCTGCTACTATTCCAGCTTATCATAGAGCTCCTCCTGCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0004506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009611 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0012505 GO:0016125 GO:0016126 GO:0016491 GO:0016705 GO:0016709 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

617

Amino Acids

67.3

Weight (kDa)

8.91

Isoelectric Point (pI)

50.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	152 - 462	5.6e-18	FAD binding domain
SE	PF08491	302 - 575	6.5e-120	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22830 AT4G37760
fragaria_vesca	FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica	MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica	Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis	pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis	RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata	RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora	Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii	Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa	Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha	Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana	Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1031
AarI	CACCTGC	2 cut(s)	164, 1487
AatII	GACGTC	1 cut(s)	462
Acc16I	TGCGCA	1 cut(s)	1463
Acc36I	ACCTGC	2 cut(s)	164, 1487
Acc65I	GGTACC	1 cut(s)	597
AccB1I	GGYRCC	5 cut(s)	473, 597, 979, 1499, 1586
AccB7I	CCANNNNNTGG	1 cut(s)	1292
AciI	CCGC	6 cut(s)	287, 372, 737, 952, 1102, 1637
AclWI	GGATC	7 cut(s)	278, 426, 570, 1052, 1063, 1205, 1395
AcoI	YGGCCR	2 cut(s)	1123, 1272
AcuI	CTGAAG	1 cut(s)	461
AcyI	GRCGYC	3 cut(s)	459, 474, 980
AfaI	GTAC	6 cut(s)	599, 807, 823, 872, 1093, 1134
AfiI	CCNNNNNNNGG	6 cut(s)	192, 514, 592, 1292, 1340, 1510
AflII	CTTAAG	1 cut(s)	1394
AflIII	ACRYGT	1 cut(s)	526
AgsI	TTSAA	8 cut(s)	258, 542, 626, 842, 899, 1171, 1321, 1596
AjiI	CACGTC	1 cut(s)	527
AjnI	CCWGG	5 cut(s)	306, 711, 1120, 1291, 1491
AloI	GAACNNNNNNTCC	2 cut(s)	513, 545
Alw21I	GWGCWC	3 cut(s)	449, 1300, 1837
Alw26I	GTCTC	2 cut(s)	540, 1786
AlwI	GGATC	7 cut(s)	278, 426, 570, 1052, 1063, 1205, 1395
Ama87I	CYCGRG	1 cut(s)	590
AoxI	GGCC	2 cut(s)	1123, 1272
ApeKI	GCWGC	3 cut(s)	491, 788, 1751
AseI	ATTAAT	2 cut(s)	1001, 1739
Asp718I	GGTACC	1 cut(s)	597
AspA2I	CCTAGG	1 cut(s)	508
AspLEI	GCGC	7 cut(s)	476, 491, 951, 982, 1464, 1554, 1751
AspS9I	GGNCC	2 cut(s)	1099, 1601
AsuC2I	CCSGG	3 cut(s)	478, 591, 592
AsuHPI	GGTGA	2 cut(s)	83, 1701
AvaI	CYCGRG	1 cut(s)	590
AvaII	GGWCC	2 cut(s)	1099, 1601
AvrII	CCTAGG	1 cut(s)	508
AxyI	CCTNAGG	1 cut(s)	969
BaeGI	GKGCMC	1 cut(s)	1504
BalI	TGGCCA	1 cut(s)	1125
BanI	GGYRCC	5 cut(s)	473, 597, 979, 1499, 1586
BanII	GRGCYC	2 cut(s)	449, 1837
BbsI	GAAGAC	1 cut(s)	529
Bbv12I	GWGCWC	3 cut(s)	449, 1300, 1837
BbvI	GCAGC	3 cut(s)	478, 775, 1763
BccI	CCATC	9 cut(s)	81, 256, 268, 677, 878, 923, 1069, 1148, 1778
BciT130I	CCWGG	5 cut(s)	308, 713, 1122, 1293, 1493
BcnI	CCSGG	3 cut(s)	478, 591, 592
BcoDI	GTCTC	2 cut(s)	540, 1786
BfaI	CTAG	3 cut(s)	509, 1052, 1442
BfoI	RGCGCY	3 cut(s)	477, 492, 983
BfrI	CTTAAG	1 cut(s)	1394
BfuAI	ACCTGC	2 cut(s)	164, 1487
BglI	GCCNNNNNGGC	1 cut(s)	1151
BisI	GCNGC	4 cut(s)	492, 789, 952, 1752
BlnI	CCTAGG	1 cut(s)	508
BlpI	GCTNAGC	1 cut(s)	651
BlsI	GCNGC	4 cut(s)	493, 790, 953, 1753
Bme1390I	CCNGG	8 cut(s)	308, 478, 591, 592, 713, 1122, 1293, 1493
Bme18I	GGWCC	2 cut(s)	1099, 1601
BmeT110I	CYCGRG	1 cut(s)	590
BmgBI	CACGTC	1 cut(s)	527
BmgT120I	GGNCC	2 cut(s)	1099, 1601
BmiI	GGNNCC	5 cut(s)	475, 599, 981, 1501, 1588
BmrFI	CCNGG	8 cut(s)	308, 478, 591, 592, 713, 1122, 1293, 1493
BmsI	GCATC	5 cut(s)	637, 1303, 1408, 1539, 1728
BpiI	GAAGAC	1 cut(s)	529
BpmI	CTGGAG	2 cut(s)	569, 1314
Bpu1102I	GCTNAGC	1 cut(s)	651
BpuMI	CCSGG	3 cut(s)	478, 591, 592
Bsa29I	ATCGAT	2 cut(s)	282, 645
BsaAI	YACGTR	1 cut(s)	1406
BsaBI	GATNNNNATC	1 cut(s)	278
BsaHI	GRCGYC	3 cut(s)	459, 474, 980
BsaJI	CCNNGG	9 cut(s)	375, 477, 508, 590, 591, 711, 879, 1491, 1579
Bsc4I	CCNNNNNNNGG	6 cut(s)	192, 514, 592, 1292, 1340, 1510
Bse118I	RCCGGY	2 cut(s)	1270, 1468
Bse1I	ACTGG	4 cut(s)	147, 1345, 1603, 1604
Bse21I	CCTNAGG	1 cut(s)	969
Bse3DI	GCAATG	1 cut(s)	1161
Bse8I	GATNNNNATC	1 cut(s)	278
BseBI	CCWGG	5 cut(s)	308, 713, 1122, 1293, 1493
BseCI	ATCGAT	2 cut(s)	282, 645
BseDI	CCNNGG	9 cut(s)	375, 477, 508, 590, 591, 711, 879, 1491, 1579
BseGI	GGATG	4 cut(s)	688, 780, 889, 1330
BseJI	GATNNNNATC	1 cut(s)	278
BseLI	CCNNNNNNNGG	6 cut(s)	192, 514, 592, 1292, 1340, 1510
BseMI	GCAATG	1 cut(s)	1161
BseMII	CTCAG	6 cut(s)	80, 665, 983, 1396, 1565, 1631
BseNI	ACTGG	4 cut(s)	147, 1345, 1603, 1604
BseRI	GAGGAG	1 cut(s)	1827
BseSI	GKGCMC	1 cut(s)	1504
BseXI	GCAGC	3 cut(s)	478, 775, 1763
Bsh1285I	CGRYCG	1 cut(s)	282
BshFI	GGCC	2 cut(s)	1125, 1274
BshNI	GGYRCC	5 cut(s)	473, 597, 979, 1499, 1586
BshVI	ATCGAT	2 cut(s)	282, 645
BsiEI	CGRYCG	1 cut(s)	282
BsiHKAI	GWGCWC	3 cut(s)	449, 1300, 1837
BsiHKCI	CYCGRG	1 cut(s)	590
BsiSI	CCGG	7 cut(s)	352, 450, 477, 560, 591, 1271, 1469
BslFI	GGGAC	1 cut(s)	633
BslI	CCNNNNNNNGG	6 cut(s)	192, 514, 592, 1292, 1340, 1510
BsmAI	GTCTC	2 cut(s)	540, 1786
BsmFI	GGGAC	1 cut(s)	633
BsmI	GAATGC	2 cut(s)	159, 196
BsnI	GGCC	2 cut(s)	1125, 1274
BsoBI	CYCGRG	1 cut(s)	590
Bsp1286I	GDGCHC	4 cut(s)	449, 1300, 1504, 1837
Bsp1407I	TGTACA	1 cut(s)	805
Bsp143I	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
Bsp1720I	GCTNAGC	1 cut(s)	651
BspACI	CCGC	6 cut(s)	287, 372, 737, 952, 1102, 1637
BspANI	GGCC	2 cut(s)	1125, 1274
BspCNI	CTCAG	6 cut(s)	79, 664, 982, 1395, 1566, 1632
BspDI	ATCGAT	2 cut(s)	282, 645
BspHI	TCATGA	1 cut(s)	1207
BspLI	GGNNCC	5 cut(s)	475, 599, 981, 1501, 1588
BspMI	ACCTGC	2 cut(s)	164, 1487
BspPI	GGATC	7 cut(s)	278, 426, 570, 1052, 1063, 1205, 1395
BspQI	GCTCTTC	1 cut(s)	437
BspT107I	GGYRCC	5 cut(s)	473, 597, 979, 1499, 1586
BspTI	CTTAAG	1 cut(s)	1394
BsrDI	GCAATG	1 cut(s)	1161
BsrFI	RCCGGY	2 cut(s)	1270, 1468
BsrGI	TGTACA	1 cut(s)	805
BsrI	ACTGG	4 cut(s)	147, 1345, 1603, 1604
BssAI	RCCGGY	2 cut(s)	1270, 1468
BssECI	CCNNGG	9 cut(s)	375, 477, 508, 590, 591, 711, 879, 1491, 1579
BssMI	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
BssNI	GRCGYC	3 cut(s)	459, 474, 980
BssT1I	CCWWGG	4 cut(s)	375, 508, 879, 1579
Bst2UI	CCWGG	5 cut(s)	308, 713, 1122, 1293, 1493
Bst4CI	ACNGT	5 cut(s)	362, 720, 762, 826, 1357
Bst6I	CTCTTC	4 cut(s)	173, 341, 437, 801
BstACI	GRCGYC	3 cut(s)	459, 474, 980
BstAFI	CTTAAG	1 cut(s)	1394
BstAPI	GCANNNNNTGC	1 cut(s)	960
BstAUI	TGTACA	1 cut(s)	805
BstBAI	YACGTR	1 cut(s)	1406
BstC8I	GCNNGC	7 cut(s)	487, 965, 1268, 1272, 1466, 1637, 1756
BstDEI	CTNAG	6 cut(s)	66, 651, 969, 1382, 1574, 1640
BstENI	CCTNNNNNAGG	2 cut(s)	512, 1508
BstF5I	GGATG	4 cut(s)	688, 780, 889, 1330
BstH2I	RGCGCY	3 cut(s)	477, 492, 983
BstHHI	GCGC	7 cut(s)	476, 491, 951, 982, 1464, 1554, 1751
BstKTI	GATC	8 cut(s)	282, 286, 421, 565, 1060, 1071, 1213, 1390
BstMAI	GTCTC	2 cut(s)	540, 1786
BstMBI	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
BstMCI	CGRYCG	1 cut(s)	282
BstMWI	GCNNNNNNNGC	7 cut(s)	482, 491, 497, 960, 1151, 1755, 1841
BstNI	CCWGG	5 cut(s)	308, 713, 1122, 1293, 1493
BstNSI	RCATGY	3 cut(s)	1046, 1270, 1563
BstSCI	CCNGG	8 cut(s)	306, 476, 589, 590, 711, 1120, 1291, 1491
BstSLI	GKGCMC	1 cut(s)	1504
BstV1I	GCAGC	3 cut(s)	478, 775, 1763
BstV2I	GAAGAC	1 cut(s)	529
BstX2I	RGATCY	1 cut(s)	1387
BstYI	RGATCY	1 cut(s)	1387
Bsu15I	ATCGAT	2 cut(s)	282, 645
Bsu36I	CCTNAGG	1 cut(s)	969
BsuRI	GGCC	2 cut(s)	1125, 1274
BsuTUI	ATCGAT	2 cut(s)	282, 645
BtgZI	GCGATG	2 cut(s)	1126, 1326
BtrI	CACGTC	1 cut(s)	527
BtsCI	GGATG	4 cut(s)	688, 780, 889, 1330
BtsIMutI	CAGTG	2 cut(s)	453, 1611
BveI	ACCTGC	2 cut(s)	164, 1487
Cac8I	GCNNGC	7 cut(s)	487, 965, 1268, 1272, 1466, 1637, 1756
CciI	TCATGA	1 cut(s)	1207
CfoI	GCGC	7 cut(s)	476, 491, 951, 982, 1464, 1554, 1751
Cfr10I	RCCGGY	2 cut(s)	1270, 1468
Cfr13I	GGNCC	2 cut(s)	1099, 1601
Cfr9I	CCCGGG	1 cut(s)	590
ClaI	ATCGAT	2 cut(s)	282, 645
CseI	GACGC	1 cut(s)	1316
Csp6I	GTAC	6 cut(s)	598, 806, 822, 871, 1092, 1133
CviAII	CATG	6 cut(s)	422, 905, 1043, 1208, 1267, 1560
CviQI	GTAC	6 cut(s)	598, 806, 822, 871, 1092, 1133
DdeI	CTNAG	6 cut(s)	66, 651, 969, 1382, 1574, 1640
DinI	GGCGCC	2 cut(s)	475, 981
DpnI	GATC	8 cut(s)	281, 285, 420, 564, 1059, 1070, 1212, 1389
DpnII	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
EaeI	YGGCCR	2 cut(s)	1123, 1272
Eam1104I	CTCTTC	4 cut(s)	173, 341, 437, 801
EarI	CTCTTC	4 cut(s)	173, 341, 437, 801
Ecl136II	GAGCTC	2 cut(s)	447, 1835
Eco130I	CCWWGG	4 cut(s)	375, 508, 879, 1579
Eco24I	GRGCYC	2 cut(s)	449, 1837
Eco47I	GGWCC	2 cut(s)	1099, 1601
Eco53kI	GAGCTC	2 cut(s)	447, 1835
Eco57I	CTGAAG	1 cut(s)	461
Eco81I	CCTNAGG	1 cut(s)	969
Eco88I	CYCGRG	1 cut(s)	590
EcoICRI	GAGCTC	2 cut(s)	447, 1835
EcoNI	CCTNNNNNAGG	2 cut(s)	512, 1508
EcoRII	CCWGG	5 cut(s)	306, 711, 1120, 1291, 1491
EcoT14I	CCWWGG	4 cut(s)	375, 508, 879, 1579
EcoT38I	GRGCYC	2 cut(s)	449, 1837
EgeI	GGCGCC	2 cut(s)	475, 981
EheI	GGCGCC	2 cut(s)	475, 981
ErhI	CCWWGG	4 cut(s)	375, 508, 879, 1579
FaeI	CATG	6 cut(s)	425, 908, 1046, 1211, 1270, 1563
FaqI	GGGAC	1 cut(s)	633
FatI	CATG	6 cut(s)	421, 904, 1042, 1207, 1266, 1559
FauI	CCCGC	2 cut(s)	730, 1644
Fnu4HI	GCNGC	4 cut(s)	492, 789, 952, 1752
FokI	GGATG	4 cut(s)	695, 787, 896, 1317
FriOI	GRGCYC	2 cut(s)	449, 1837
Fsp4HI	GCNGC	4 cut(s)	492, 789, 952, 1752
FspBI	CTAG	3 cut(s)	509, 1052, 1442
FspI	TGCGCA	1 cut(s)	1463
GlaI	GCGC	7 cut(s)	475, 490, 950, 981, 1463, 1553, 1750
GluI	GCNGC	4 cut(s)	492, 789, 952, 1752
GsuI	CTGGAG	2 cut(s)	569, 1314
HaeII	RGCGCY	3 cut(s)	477, 492, 983
HaeIII	GGCC	2 cut(s)	1125, 1274
HapII	CCGG	7 cut(s)	352, 450, 477, 560, 591, 1271, 1469
HgaI	GACGC	1 cut(s)	1316
HhaI	GCGC	7 cut(s)	476, 491, 951, 982, 1464, 1554, 1751
Hin1I	GRCGYC	3 cut(s)	459, 474, 980
Hin1II	CATG	6 cut(s)	425, 908, 1046, 1211, 1270, 1563
Hin6I	GCGC	7 cut(s)	474, 489, 949, 980, 1462, 1552, 1749
HinP1I	GCGC	7 cut(s)	474, 489, 949, 980, 1462, 1552, 1749
HindIII	AAGCTT	1 cut(s)	139
HinfI	GANTC	2 cut(s)	28, 1445
HpaII	CCGG	7 cut(s)	352, 450, 477, 560, 591, 1271, 1469
HphI	GGTGA	2 cut(s)	83, 1701
Hpy166II	GTNNAC	1 cut(s)	1019
Hpy188I	TCNGA	8 cut(s)	69, 165, 430, 441, 730, 1068, 1369, 1575
Hpy188III	TCNNGA	5 cut(s)	25, 298, 890, 1208, 1723
Hpy8I	GTNNAC	1 cut(s)	1019
Hpy99I	CGWCG	2 cut(s)	351, 473
HpyCH4III	ACNGT	5 cut(s)	362, 720, 762, 826, 1357
HpyCH4IV	ACGT	5 cut(s)	291, 459, 526, 1405, 1687
HpyCH4V	TGCA	6 cut(s)	4, 159, 500, 963, 1226, 1434
HpyF10VI	GCNNNNNNNGC	7 cut(s)	482, 491, 497, 960, 1151, 1755, 1841
HpyF3I	CTNAG	6 cut(s)	66, 651, 969, 1382, 1574, 1640
HpySE526I	ACGT	5 cut(s)	291, 459, 526, 1405, 1687
Hsp92I	GRCGYC	3 cut(s)	459, 474, 980
Hsp92II	CATG	6 cut(s)	425, 908, 1046, 1211, 1270, 1563
HspAI	GCGC	7 cut(s)	474, 489, 949, 980, 1462, 1552, 1749
KasI	GGCGCC	2 cut(s)	473, 979
KpnI	GGTACC	1 cut(s)	601
KroI	GCCGGC	1 cut(s)	1270
KroNI	GCCGGC	1 cut(s)	1272
Kzo9I	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
LguI	GCTCTTC	1 cut(s)	437
LmnI	GCTCC	7 cut(s)	452, 814, 913, 1189, 1295, 1426, 1840
Lsp1109I	GCAGC	3 cut(s)	478, 775, 1763
LweI	GCATC	5 cut(s)	637, 1303, 1408, 1539, 1728
MaeI	CTAG	3 cut(s)	509, 1052, 1442
MaeII	ACGT	5 cut(s)	291, 459, 526, 1405, 1687
MaeIII	GTNAC	1 cut(s)	826
MalI	GATC	8 cut(s)	281, 285, 420, 564, 1059, 1070, 1212, 1389
MboI	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
MfeI	CAATTG	2 cut(s)	809, 1227
MflI	RGATCY	1 cut(s)	1387
MhlI	GDGCHC	4 cut(s)	449, 1300, 1504, 1837
MlsI	TGGCCA	1 cut(s)	1125
MluNI	TGGCCA	1 cut(s)	1125
Mly113I	GGCGCC	2 cut(s)	474, 980
MlyI	GAGTC	1 cut(s)	22
MmeI	TCCRAC	1 cut(s)	1663
Mox20I	TGGCCA	1 cut(s)	1125
MroNI	GCCGGC	1 cut(s)	1270
MscI	TGGCCA	1 cut(s)	1125
MslI	CAYNNNNRTG	2 cut(s)	729, 1041
Msp20I	TGGCCA	1 cut(s)	1125
MspA1I	CMGCKG	2 cut(s)	1104, 1639
MspCI	CTTAAG	1 cut(s)	1394
MspI	CCGG	7 cut(s)	352, 450, 477, 560, 591, 1271, 1469
MspR9I	CCNGG	8 cut(s)	308, 478, 591, 592, 713, 1122, 1293, 1493
MunI	CAATTG	2 cut(s)	809, 1227
Mva1269I	GAATGC	2 cut(s)	159, 196
MvaI	CCWGG	5 cut(s)	308, 713, 1122, 1293, 1493
MwoI	GCNNNNNNNGC	7 cut(s)	482, 491, 497, 960, 1151, 1755, 1841
NaeI	GCCGGC	1 cut(s)	1272
NarI	GGCGCC	2 cut(s)	474, 980
NciI	CCSGG	3 cut(s)	478, 591, 592
NdeII	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
NgoMIV	GCCGGC	1 cut(s)	1270
NlaIII	CATG	6 cut(s)	425, 908, 1046, 1211, 1270, 1563
NlaIV	GGNNCC	5 cut(s)	475, 599, 981, 1501, 1588
NmuCI	GTSAC	1 cut(s)	826
NsbI	TGCGCA	1 cut(s)	1463
NspI	RCATGY	3 cut(s)	1046, 1270, 1563
PaeI	GCATGC	1 cut(s)	1270
PagI	TCATGA	1 cut(s)	1207
PaqCI	CACCTGC	2 cut(s)	164, 1487
PciSI	GCTCTTC	1 cut(s)	437
PcsI	WCGNNNNNNNCGW	2 cut(s)	288, 465
PctI	GAATGC	2 cut(s)	159, 196
PdiI	GCCGGC	1 cut(s)	1272
PfeI	GAWTC	1 cut(s)	1445
PflMI	CCANNNNNTGG	1 cut(s)	1292
PfoI	TCCNGGA	1 cut(s)	1291
PkrI	GCNGC	4 cut(s)	493, 790, 953, 1753
Ple19I	CGATCG	1 cut(s)	282
PleI	GAGTC	1 cut(s)	22
PluTI	GGCGCC	2 cut(s)	477, 983
PpsI	GAGTC	1 cut(s)	22
Ppu21I	YACGTR	1 cut(s)	1406
PshBI	ATTAAT	2 cut(s)	1001, 1739
PsiI	TTATAA	1 cut(s)	1031
Psp124BI	GAGCTC	2 cut(s)	449, 1837
Psp6I	CCWGG	5 cut(s)	306, 711, 1120, 1291, 1491
PspGI	CCWGG	5 cut(s)	306, 711, 1120, 1291, 1491
PspN4I	GGNNCC	5 cut(s)	475, 599, 981, 1501, 1588
PspPI	GGNCC	2 cut(s)	1099, 1601
PsuI	RGATCY	1 cut(s)	1387
PvuI	CGATCG	1 cut(s)	282
RsaI	GTAC	6 cut(s)	599, 807, 823, 872, 1093, 1134
RsaNI	GTAC	6 cut(s)	598, 806, 822, 871, 1092, 1133
RseI	CAYNNNNRTG	2 cut(s)	729, 1041
SacI	GAGCTC	2 cut(s)	449, 1837
SapI	GCTCTTC	1 cut(s)	437
SatI	GCNGC	4 cut(s)	492, 789, 952, 1752
Sau3AI	GATC	8 cut(s)	279, 283, 418, 562, 1057, 1068, 1210, 1387
Sau96I	GGNCC	2 cut(s)	1099, 1601
SchI	GAGTC	1 cut(s)	22
ScrFI	CCNGG	8 cut(s)	308, 478, 591, 592, 713, 1122, 1293, 1493
SduI	GDGCHC	4 cut(s)	449, 1300, 1504, 1837
SfaNI	GCATC	5 cut(s)	637, 1303, 1408, 1539, 1728
SfoI	GGCGCC	2 cut(s)	475, 981
SinI	GGWCC	2 cut(s)	1099, 1601
SmaI	CCCGGG	1 cut(s)	592
SmiMI	CAYNNNNRTG	2 cut(s)	729, 1041
SmlI	CTYRAG	1 cut(s)	1394
SmoI	CTYRAG	1 cut(s)	1394
SphI	GCATGC	1 cut(s)	1270
SsiI	CCGC	6 cut(s)	287, 372, 737, 952, 1102, 1637
SspDI	GGCGCC	2 cut(s)	473, 979
SspI	AATATT	2 cut(s)	1243, 1764
SspMI	CTAG	3 cut(s)	509, 1052, 1442
SstI	GAGCTC	2 cut(s)	449, 1837
StyD4I	CCNGG	8 cut(s)	306, 476, 589, 590, 711, 1120, 1291, 1491
StyI	CCWWGG	4 cut(s)	375, 508, 879, 1579
TaaI	ACNGT	5 cut(s)	362, 720, 762, 826, 1357
TaiI	ACGT	5 cut(s)	294, 462, 529, 1408, 1690
TaqI	TCGA	3 cut(s)	282, 565, 645
TatI	WGTACW	3 cut(s)	805, 870, 1091
TauI	GCSGC	1 cut(s)	954
TfiI	GAWTC	1 cut(s)	1445
TscAI	CASTG	2 cut(s)	460, 1611
TseFI	GTSAC	1 cut(s)	826
TseI	GCWGC	3 cut(s)	491, 788, 1751
Tsp45I	GTSAC	1 cut(s)	826
TspDTI	ATGAA	4 cut(s)	234, 754, 1196, 1464
TspGWI	ACGGA	1 cut(s)	335
TspMI	CCCGGG	1 cut(s)	590
TspRI	CASTG	2 cut(s)	460, 1611
Van91I	CCANNNNNTGG	1 cut(s)	1292
Vha464I	CTTAAG	1 cut(s)	1394
VpaK11BI	GGWCC	2 cut(s)	1099, 1601
VspI	ATTAAT	2 cut(s)	1001, 1739
XagI	CCTNNNNNAGG	2 cut(s)	512, 1508
XceI	RCATGY	3 cut(s)	1046, 1270, 1563
XcmI	CCANNNNNNNNNTGG	3 cut(s)	808, 1153, 1719
XmaI	CCCGGG	1 cut(s)	590
XmaJI	CCTAGG	1 cut(s)	508
XspI	CTAG	3 cut(s)	509, 1052, 1442
ZraI	GACGTC	1 cut(s)	460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.