RLG00000017694

Squalene epoxidase 3-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
20121844 .. 20125015
3172 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017694

Sequence Viewer

Length: 1590 bp
ATGGCGACAATGGTGGCGATCGATCCGTATGTTGTGTGGACGTTCTTTGCTTCTTTATTGGGTTTTCTTCTTCTCTCCCTTCTCCGCCGACGTAATTACGGTAATGCCACTGCCAATGACAAGGGAATGGTTAACAAGACGACCGAGAATCATGTTTCTGAAGAATGTGTGAAGAGCTCCTGCGGCTCCGGAACTGACGTCATCATCGTTGGCGCCGGTGTTGCTGGCGCTGCTCTTGCACACACCCTTGGCAAGGAGGGAAGACGTGTTCGTGTGATTGAAAGAGACTTGAGAGAGCCGGATCGAATTGTTGGCGAACTTCTCCAGCCTGGGGGATACCTGAAGCTGATTGACTTGGGACTTGAAGACTGTGTTGAGGAAATCGATGCTCAGCGAGTTCTTGGATATGCTCTTTTTAAGGATGGGAAGAATACTTCACTGTCCTATCCCCTGGAACAGTTCCACTCAGATGTGGCGGGTAGAAGTTTCCACAATGGCCGATTCATACAGAGGATGAGAGAAAAAGCTGCTACTCTTCCCAATGTACAACTGGAGCAAGGTACAGTCACATCCCTGCTTGAAGAAAATGGGACAATTACGGGGGTTCAGTACAAAACTAAGGATGGTCAAGAACTTCAAGCTCATGCTCCTCTTACAATTGTCTGCGATGGTTGCTTCTCAAATCTGCGCCGCACTCTTTGTAAGCCTCAGGTAGAAGTGCCCTCTTGTTTTGTGGGATTAATTTTGGAAAATTGTGAACTCCCATTTGCAAATCATGGGCATGTTATTCTTGCTGACCCATCTCCAATCCTGTTTTACCAAATCAGTAGTACAGAGGTCCGCTGTTTAGTTGATGTGCCCGGCCAGAAAGTACCTCCCATCACTAATGGAGCATTGGCTAACTATTTGAAGAATGTGGTAGCTCCACAGCTTCCACCTGAACTTCATGATTCGTTCATATCTGCAATTGACAAAGGAAGTATTAGAACTATGCCGAATAGAAGCATGCCAGCCAATCCGCAGCCAACTCCTGGAGCCCTTTTAATGGGTGATGCTTTCAATATGCGTCATCCTTTAACTGGTGGAGGAATGACTGTGGCACTATCGGACATTGTTATACTCAGGGATCTTCTTAAACCATTACGTGACATAAATGATGCTTCTTCATTGTGCAACTACCTAGAATCCTTTTATACCTTGCGCAAGCCAGTTGCATCTACAATAAACACCTTGGCAGGTGCCCTATACAAGGTGTTCTCTGCCTCCCCTGACCAAGCAAGGAAGGAGATGCGCCAAGCATGCTTTGACTATCTGAGCCTTGGAGGTGCCTGTTCAACTGGGCCAGTGGCTCTCCTCTCTGGTCTAAATCCTCGCCCGCTGAGTTTAGTTCTCCATTTTTTTGCTGTTGCGATATATGGTGTTGGACGTTTGCTTCTACCATTTCCTTCACTGAAACGCATGTGGATTGGAGTGAGATTAATCAGGAGCGCAGTAGGCATAATATTTCCCATCATCAAGGCAGAAGGTGTGAGACAGATGTTCTTTCCTGCTACTATTCCAGCTTGTCATAGGGCTCCTCCTGCTAACTGA

Protein Analysis

530

Amino Acids

57.57

Weight (kDa)

8.49

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 65 - 383 6e-19 FAD binding domain
SE PF08491 215 - 485 7.2e-122 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1226
AatII GACGTC 1 cut(s) 201
Acc16I TGCGCA 1 cut(s) 1202
Acc36I ACCTGC 1 cut(s) 1226
AccB1I GGYRCC 3 cut(s) 212, 1238, 1325
AccB7I CCANNNNNTGG 1 cut(s) 1031
AccIII TCCGGA 1 cut(s) 188
AciI CCGC 7 cut(s) 85, 183, 476, 691, 841, 1019, 1376
AclWI GGATC 3 cut(s) 17, 309, 1134
AcoI YGGCCR 2 cut(s) 496, 862
AcuI CTGAAG 2 cut(s) 180, 362
AcyI GRCGYC 2 cut(s) 198, 213
AfaI GTAC 5 cut(s) 546, 562, 611, 832, 873
AfiI CCNNNNNNNGG 6 cut(s) 253, 331, 1031, 1045, 1079, 1249
AflIII ACRYGT 1 cut(s) 265
AgsI TTSAA 7 cut(s) 281, 365, 581, 638, 910, 1060, 1335
AjiI CACGTC 1 cut(s) 266
AjnI CCWGG 3 cut(s) 328, 450, 1030
AloI GAACNNNNNNTCC 2 cut(s) 252, 284
AluBI AGCT 7 cut(s) 177, 346, 527, 641, 923, 931, 1562
AluI AGCT 7 cut(s) 177, 346, 527, 641, 923, 931, 1562
Alw21I GWGCWC 1 cut(s) 179
Alw26I GTCTC 2 cut(s) 279, 1525
AlwI GGATC 3 cut(s) 17, 309, 1134
Aor13HI TCCGGA 1 cut(s) 188
AoxI GGCC 3 cut(s) 496, 862, 1340
ApeKI GCWGC 3 cut(s) 230, 527, 1021
AseI ATTAAT 2 cut(s) 740, 1478
AspLEI GCGC 6 cut(s) 215, 230, 690, 1203, 1293, 1490
AspS9I GGNCC 2 cut(s) 838, 1340
AsuC2I CCSGG 1 cut(s) 861
AsuHPI GGTGA 1 cut(s) 1061
AvaII GGWCC 1 cut(s) 838
AxyI CCTNAGG 1 cut(s) 708
BaeGI GKGCMC 3 cut(s) 723, 861, 1243
BanI GGYRCC 3 cut(s) 212, 1238, 1325
BanII GRGCYC 3 cut(s) 179, 1039, 1576
BbsI GAAGAC 2 cut(s) 268, 372
Bbv12I GWGCWC 1 cut(s) 179
BbvI GCAGC 3 cut(s) 217, 514, 1033
BccI CCATC 6 cut(s) 416, 617, 662, 808, 887, 1517
BciT130I CCWGG 3 cut(s) 330, 452, 1032
BciVI GTATCC 1 cut(s) 329
BcnI CCSGG 1 cut(s) 861
BcoDI GTCTC 2 cut(s) 279, 1525
BfaI CTAG 1 cut(s) 1181
BfoI RGCGCY 2 cut(s) 216, 231
BfuAI ACCTGC 1 cut(s) 1226
BfuI GTATCC 1 cut(s) 329
BisI GCNGC 5 cut(s) 184, 231, 528, 691, 1022
BlpI GCTNAGC 1 cut(s) 390
BlsI GCNGC 5 cut(s) 185, 232, 529, 692, 1023
Bme1390I CCNGG 4 cut(s) 330, 452, 861, 1032
Bme18I GGWCC 1 cut(s) 838
BmgBI CACGTC 1 cut(s) 266
BmgT120I GGNCC 2 cut(s) 838, 1340
BmiI GGNNCC 6 cut(s) 187, 214, 1036, 1240, 1327, 1575
BmrFI CCNGG 4 cut(s) 330, 452, 861, 1032
BmrI ACTGGG 1 cut(s) 1347
BmsI GCATC 5 cut(s) 376, 1042, 1147, 1223, 1278
BmuI ACTGGG 1 cut(s) 1347
BpiI GAAGAC 2 cut(s) 268, 372
BpmI CTGGAG 3 cut(s) 308, 572, 1053
Bpu1102I GCTNAGC 1 cut(s) 390
BpuEI CTTGAG 1 cut(s) 310
BpuMI CCSGG 1 cut(s) 861
Bsa29I ATCGAT 2 cut(s) 21, 384
BsaAI YACGTR 1 cut(s) 1145
BsaHI GRCGYC 2 cut(s) 198, 213
BsaJI CCNNGG 5 cut(s) 247, 329, 450, 1230, 1318
BsaWI WCCGGW 1 cut(s) 188
Bsc4I CCNNNNNNNGG 6 cut(s) 253, 331, 1031, 1045, 1079, 1249
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 5 cut(s) 555, 1084, 1208, 1342, 1343
Bse21I CCTNAGG 1 cut(s) 708
BseAI TCCGGA 1 cut(s) 188
BseBI CCWGG 3 cut(s) 330, 452, 1032
BseCI ATCGAT 2 cut(s) 21, 384
BseDI CCNNGG 5 cut(s) 247, 329, 450, 1230, 1318
BseGI GGATG 5 cut(s) 427, 519, 569, 628, 1069
BseLI CCNNNNNNNGG 6 cut(s) 253, 331, 1031, 1045, 1079, 1249
BseMII CTCAG 6 cut(s) 404, 480, 722, 1135, 1304, 1370
BseNI ACTGG 5 cut(s) 555, 1084, 1208, 1342, 1343
BseRI GAGGAG 3 cut(s) 639, 1343, 1566
BseSI GKGCMC 3 cut(s) 723, 861, 1243
BseXI GCAGC 3 cut(s) 217, 514, 1033
Bsh1285I CGRYCG 2 cut(s) 21, 144
BshFI GGCC 3 cut(s) 498, 864, 1342
BshNI GGYRCC 3 cut(s) 212, 1238, 1325
BshVI ATCGAT 2 cut(s) 21, 384
BsiEI CGRYCG 2 cut(s) 21, 144
BsiHKAI GWGCWC 1 cut(s) 179
BsiSI CCGG 4 cut(s) 189, 216, 299, 861
BslFI GGGAC 2 cut(s) 372, 604
BslI CCNNNNNNNGG 6 cut(s) 253, 331, 1031, 1045, 1079, 1249
BsmAI GTCTC 2 cut(s) 279, 1525
BsmFI GGGAC 2 cut(s) 372, 604
BsnI GGCC 3 cut(s) 498, 864, 1342
Bsp1286I GDGCHC 6 cut(s) 179, 723, 861, 1039, 1243, 1576
Bsp13I TCCGGA 1 cut(s) 188
Bsp1407I TGTACA 1 cut(s) 544
Bsp143I GATC 4 cut(s) 18, 22, 301, 1126
Bsp1720I GCTNAGC 1 cut(s) 390
BspACI CCGC 7 cut(s) 85, 183, 476, 691, 841, 1019, 1376
BspANI GGCC 3 cut(s) 498, 864, 1342
BspCNI CTCAG 6 cut(s) 403, 479, 721, 1134, 1305, 1371
BspDI ATCGAT 2 cut(s) 21, 384
BspEI TCCGGA 1 cut(s) 188
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 6 cut(s) 187, 214, 1036, 1240, 1327, 1575
BspMI ACCTGC 1 cut(s) 1226
BspPI GGATC 3 cut(s) 17, 309, 1134
BspQI GCTCTTC 1 cut(s) 167
BspT107I GGYRCC 3 cut(s) 212, 1238, 1325
BsrFI RCCGGY 1 cut(s) 215
BsrGI TGTACA 1 cut(s) 544
BsrI ACTGG 5 cut(s) 555, 1084, 1208, 1342, 1343
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 5 cut(s) 247, 329, 450, 1230, 1318
BssMI GATC 4 cut(s) 18, 22, 301, 1126
BssNI GRCGYC 2 cut(s) 198, 213
BssT1I CCWWGG 3 cut(s) 247, 1230, 1318
Bst2UI CCWGG 3 cut(s) 330, 452, 1032
Bst4CI ACNGT 6 cut(s) 101, 371, 441, 459, 565, 1096
Bst6I CTCTTC 2 cut(s) 167, 540
BstACI GRCGYC 2 cut(s) 198, 213
BstAUI TGTACA 1 cut(s) 544
BstBAI YACGTR 1 cut(s) 1145
BstC8I GCNNGC 6 cut(s) 226, 1007, 1011, 1205, 1300, 1376
BstDEI CTNAG 7 cut(s) 390, 466, 618, 708, 1121, 1313, 1379
BstENI CCTNNNNNAGG 2 cut(s) 251, 1247
BstF5I GGATG 5 cut(s) 427, 519, 569, 628, 1069
BstH2I RGCGCY 2 cut(s) 216, 231
BstHHI GCGC 6 cut(s) 215, 230, 690, 1203, 1293, 1490
BstKTI GATC 4 cut(s) 21, 25, 304, 1129
BstMAI GTCTC 2 cut(s) 279, 1525
BstMBI GATC 4 cut(s) 18, 22, 301, 1126
BstMCI CGRYCG 2 cut(s) 21, 144
BstMWI GCNNNNNNNGC 8 cut(s) 183, 221, 230, 236, 672, 1299, 1494, 1580
BstNI CCWGG 3 cut(s) 330, 452, 1032
BstNSI RCATGY 4 cut(s) 785, 1009, 1302, 1462
BstSCI CCNGG 4 cut(s) 328, 450, 859, 1030
BstSLI GKGCMC 3 cut(s) 723, 861, 1243
BstV1I GCAGC 3 cut(s) 217, 514, 1033
BstV2I GAAGAC 2 cut(s) 268, 372
BstX2I RGATCY 1 cut(s) 1126
BstYI RGATCY 1 cut(s) 1126
Bsu15I ATCGAT 2 cut(s) 21, 384
Bsu36I CCTNAGG 1 cut(s) 708
BsuI GTATCC 1 cut(s) 329
BsuRI GGCC 3 cut(s) 498, 864, 1342
BsuTUI ATCGAT 2 cut(s) 21, 384
BtgZI GCGATG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 266
BtsCI GGATG 5 cut(s) 427, 519, 569, 628, 1069
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 4 cut(s) 108, 437, 1350, 1448
BveI ACCTGC 1 cut(s) 1226
Cac8I GCNNGC 6 cut(s) 226, 1007, 1011, 1205, 1300, 1376
CciI TCATGA 1 cut(s) 946
CfoI GCGC 6 cut(s) 215, 230, 690, 1203, 1293, 1490
Cfr10I RCCGGY 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 838, 1340
ClaI ATCGAT 2 cut(s) 21, 384
CseI GACGC 1 cut(s) 1055
Csp6I GTAC 5 cut(s) 545, 561, 610, 831, 872
CviAII CATG 8 cut(s) 152, 644, 776, 782, 947, 1006, 1299, 1459
CviQI GTAC 5 cut(s) 545, 561, 610, 831, 872
DdeI CTNAG 7 cut(s) 390, 466, 618, 708, 1121, 1313, 1379
DinI GGCGCC 1 cut(s) 214
DpnI GATC 4 cut(s) 20, 24, 303, 1128
DpnII GATC 4 cut(s) 18, 22, 301, 1126
EaeI YGGCCR 2 cut(s) 496, 862
Eam1104I CTCTTC 2 cut(s) 167, 540
EarI CTCTTC 2 cut(s) 167, 540
EciI GGCGGA 1 cut(s) 74
Ecl136II GAGCTC 1 cut(s) 177
Eco130I CCWWGG 3 cut(s) 247, 1230, 1318
Eco24I GRGCYC 3 cut(s) 179, 1039, 1576
Eco47I GGWCC 1 cut(s) 838
Eco53kI GAGCTC 1 cut(s) 177
Eco57I CTGAAG 2 cut(s) 180, 362
Eco81I CCTNAGG 1 cut(s) 708
EcoICRI GAGCTC 1 cut(s) 177
EcoNI CCTNNNNNAGG 2 cut(s) 251, 1247
EcoRII CCWGG 3 cut(s) 328, 450, 1030
EcoT14I CCWWGG 3 cut(s) 247, 1230, 1318
EcoT38I GRGCYC 3 cut(s) 179, 1039, 1576
EgeI GGCGCC 1 cut(s) 214
EheI GGCGCC 1 cut(s) 214
ErhI CCWWGG 3 cut(s) 247, 1230, 1318
FaeI CATG 8 cut(s) 155, 647, 779, 785, 950, 1009, 1302, 1462
FaqI GGGAC 2 cut(s) 372, 604
FatI CATG 8 cut(s) 151, 643, 775, 781, 946, 1005, 1298, 1458
FauI CCCGC 2 cut(s) 469, 1383
Fnu4HI GCNGC 5 cut(s) 184, 231, 528, 691, 1022
FokI GGATG 5 cut(s) 434, 526, 556, 635, 1056
FriOI GRGCYC 3 cut(s) 179, 1039, 1576
Fsp4HI GCNGC 5 cut(s) 184, 231, 528, 691, 1022
FspBI CTAG 1 cut(s) 1181
FspI TGCGCA 1 cut(s) 1202
GlaI GCGC 6 cut(s) 214, 229, 689, 1202, 1292, 1489
GluI GCNGC 5 cut(s) 184, 231, 528, 691, 1022
GsuI CTGGAG 3 cut(s) 308, 572, 1053
HaeII RGCGCY 2 cut(s) 216, 231
HaeIII GGCC 3 cut(s) 498, 864, 1342
HapII CCGG 4 cut(s) 189, 216, 299, 861
HgaI GACGC 1 cut(s) 1055
HhaI GCGC 6 cut(s) 215, 230, 690, 1203, 1293, 1490
Hin1I GRCGYC 2 cut(s) 198, 213
Hin1II CATG 8 cut(s) 155, 647, 779, 785, 950, 1009, 1302, 1462
Hin6I GCGC 6 cut(s) 213, 228, 688, 1201, 1291, 1488
HinP1I GCGC 6 cut(s) 213, 228, 688, 1201, 1291, 1488
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HinfI GANTC 4 cut(s) 148, 501, 950, 1184
HpaI GTTAAC 1 cut(s) 133
HpaII CCGG 4 cut(s) 189, 216, 299, 861
HphI GGTGA 1 cut(s) 1061
Hpy166II GTNNAC 3 cut(s) 39, 133, 758
Hpy188I TCNGA 4 cut(s) 160, 469, 1108, 1314
Hpy188III TCNNGA 4 cut(s) 189, 629, 947, 1483
Hpy8I GTNNAC 3 cut(s) 39, 133, 758
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 4 cut(s) 89, 1276, 1455, 1517
HpyCH4III ACNGT 6 cut(s) 101, 371, 441, 459, 565, 1096
HpyCH4IV ACGT 6 cut(s) 41, 91, 198, 265, 1144, 1426
HpyCH4V TGCA 5 cut(s) 239, 770, 965, 1173, 1214
HpyF10VI GCNNNNNNNGC 8 cut(s) 183, 221, 230, 236, 672, 1299, 1494, 1580
HpyF3I CTNAG 7 cut(s) 390, 466, 618, 708, 1121, 1313, 1379
HpySE526I ACGT 6 cut(s) 41, 91, 198, 265, 1144, 1426
Hsp92I GRCGYC 2 cut(s) 198, 213
Hsp92II CATG 8 cut(s) 155, 647, 779, 785, 950, 1009, 1302, 1462
HspAI GCGC 6 cut(s) 213, 228, 688, 1201, 1291, 1488
KasI GGCGCC 1 cut(s) 212
Kpn2I TCCGGA 1 cut(s) 188
KspAI GTTAAC 1 cut(s) 133
Kzo9I GATC 4 cut(s) 18, 22, 301, 1126
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 9 cut(s) 182, 191, 553, 652, 890, 928, 1034, 1485, 1579
Lsp1109I GCAGC 3 cut(s) 217, 514, 1033
LweI GCATC 5 cut(s) 376, 1042, 1147, 1223, 1278
MaeI CTAG 1 cut(s) 1181
MaeII ACGT 6 cut(s) 41, 91, 198, 265, 1144, 1426
MaeIII GTNAC 2 cut(s) 565, 1145
MalI GATC 4 cut(s) 20, 24, 303, 1128
MboI GATC 4 cut(s) 18, 22, 301, 1126
MfeI CAATTG 2 cut(s) 657, 966
MflI RGATCY 1 cut(s) 1126
MhlI GDGCHC 6 cut(s) 179, 723, 861, 1039, 1243, 1576
MluCI AATT 7 cut(s) 94, 306, 594, 657, 741, 751, 966
Mly113I GGCGCC 1 cut(s) 213
MmeI TCCRAC 1 cut(s) 1402
MroI TCCGGA 1 cut(s) 188
MseI TTAA 7 cut(s) 132, 417, 740, 1043, 1076, 1134, 1478
MslI CAYNNNNRTG 2 cut(s) 468, 780
MspA1I CMGCKG 2 cut(s) 843, 1378
MspI CCGG 4 cut(s) 189, 216, 299, 861
MspR9I CCNGG 4 cut(s) 330, 452, 861, 1032
MunI CAATTG 2 cut(s) 657, 966
MvaI CCWGG 3 cut(s) 330, 452, 1032
MwoI GCNNNNNNNGC 8 cut(s) 183, 221, 230, 236, 672, 1299, 1494, 1580
NarI GGCGCC 1 cut(s) 213
NciI CCSGG 1 cut(s) 861
NdeII GATC 4 cut(s) 18, 22, 301, 1126
NlaIII CATG 8 cut(s) 155, 647, 779, 785, 950, 1009, 1302, 1462
NlaIV GGNNCC 6 cut(s) 187, 214, 1036, 1240, 1327, 1575
NmuCI GTSAC 2 cut(s) 565, 1145
NsbI TGCGCA 1 cut(s) 1202
NspI RCATGY 4 cut(s) 785, 1009, 1302, 1462
PaeI GCATGC 2 cut(s) 1009, 1302
PagI TCATGA 1 cut(s) 946
PaqCI CACCTGC 1 cut(s) 1226
PciSI GCTCTTC 1 cut(s) 167
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PfeI GAWTC 4 cut(s) 148, 501, 950, 1184
PflMI CCANNNNNTGG 1 cut(s) 1031
PfoI TCCNGGA 1 cut(s) 1030
PkrI GCNGC 5 cut(s) 185, 232, 529, 692, 1023
Ple19I CGATCG 1 cut(s) 21
PluTI GGCGCC 1 cut(s) 216
Ppu21I YACGTR 1 cut(s) 1145
PshBI ATTAAT 2 cut(s) 740, 1478
Psp124BI GAGCTC 1 cut(s) 179
Psp6I CCWGG 3 cut(s) 328, 450, 1030
PspGI CCWGG 3 cut(s) 328, 450, 1030
PspN4I GGNNCC 6 cut(s) 187, 214, 1036, 1240, 1327, 1575
PspPI GGNCC 2 cut(s) 838, 1340
PsuI RGATCY 1 cut(s) 1126
PvuI CGATCG 1 cut(s) 21
RsaI GTAC 5 cut(s) 546, 562, 611, 832, 873
RsaNI GTAC 5 cut(s) 545, 561, 610, 831, 872
RseI CAYNNNNRTG 2 cut(s) 468, 780
SacI GAGCTC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 7 cut(s) 132, 417, 740, 1043, 1076, 1134, 1478
SatI GCNGC 5 cut(s) 184, 231, 528, 691, 1022
Sau3AI GATC 4 cut(s) 18, 22, 301, 1126
Sau96I GGNCC 2 cut(s) 838, 1340
ScrFI CCNGG 4 cut(s) 330, 452, 861, 1032
SduI GDGCHC 6 cut(s) 179, 723, 861, 1039, 1243, 1576
SfaNI GCATC 5 cut(s) 376, 1042, 1147, 1223, 1278
SfoI GGCGCC 1 cut(s) 214
SgrAI CRCCGGYG 1 cut(s) 215
SinI GGWCC 1 cut(s) 838
SmiMI CAYNNNNRTG 2 cut(s) 468, 780
SmlI CTYRAG 1 cut(s) 289
SmoI CTYRAG 1 cut(s) 289
SphI GCATGC 2 cut(s) 1009, 1302
Sse9I AATT 7 cut(s) 94, 306, 594, 657, 741, 751, 966
SsiI CCGC 7 cut(s) 85, 183, 476, 691, 841, 1019, 1376
SspDI GGCGCC 1 cut(s) 212
SspI AATATT 1 cut(s) 1503
SspMI CTAG 1 cut(s) 1181
SstI GAGCTC 1 cut(s) 179
StyD4I CCNGG 4 cut(s) 328, 450, 859, 1030
StyI CCWWGG 3 cut(s) 247, 1230, 1318
TaaI ACNGT 6 cut(s) 101, 371, 441, 459, 565, 1096
TaiI ACGT 6 cut(s) 44, 94, 201, 268, 1147, 1429
TaqI TCGA 3 cut(s) 21, 304, 384
TaqII GACCGA 1 cut(s) 158
TasI AATT 7 cut(s) 94, 306, 594, 657, 741, 751, 966
TatI WGTACW 3 cut(s) 544, 609, 830
TauI GCSGC 2 cut(s) 186, 693
TfiI GAWTC 4 cut(s) 148, 501, 950, 1184
Tru1I TTAA 7 cut(s) 132, 417, 740, 1043, 1076, 1134, 1478
Tru9I TTAA 7 cut(s) 132, 417, 740, 1043, 1076, 1134, 1478
TscAI CASTG 4 cut(s) 115, 444, 1350, 1455
TseFI GTSAC 2 cut(s) 565, 1145
TseI GCWGC 3 cut(s) 230, 527, 1021
Tsp45I GTSAC 2 cut(s) 565, 1145
TspDTI ATGAA 4 cut(s) 493, 935, 946, 1155
TspGWI ACGGA 1 cut(s) 15
TspRI CASTG 4 cut(s) 115, 444, 1350, 1455
Van91I CCANNNNNTGG 1 cut(s) 1031
VpaK11BI GGWCC 1 cut(s) 838
VspI ATTAAT 2 cut(s) 740, 1478
XagI CCTNNNNNAGG 2 cut(s) 251, 1247
XceI RCATGY 4 cut(s) 785, 1009, 1302, 1462
XcmI CCANNNNNNNNNTGG 1 cut(s) 547
XspI CTAG 1 cut(s) 1181
ZraI GACGTC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.