squalene
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Tubulin | PF00091 | 13 - 173 | 1.1e-41 | Tubulin/FtsZ family, GTPase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 17 |
| Acc65I | GGTACC | 1 cut(s) | 326 |
| AccB1I | GGYRCC | 2 cut(s) | 65, 326 |
| AccIII | TCCGGA | 1 cut(s) | 261 |
| AciI | CCGC | 4 cut(s) | 87, 145, 192, 324 |
| AclWI | GGATC | 3 cut(s) | 253, 261, 266 |
| AcoI | YGGCCR | 1 cut(s) | 22 |
| AcyI | GRCGYC | 2 cut(s) | 36, 189 |
| AfaI | GTAC | 1 cut(s) | 328 |
| AgeI | ACCGGT | 2 cut(s) | 62, 488 |
| AgsI | TTSAA | 2 cut(s) | 43, 310 |
| AjiI | CACGTC | 1 cut(s) | 79 |
| AjnI | CCWGG | 2 cut(s) | 291, 329 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 383, 415 |
| AleI | CACNNNNGTG | 2 cut(s) | 489, 491 |
| AluBI | AGCT | 4 cut(s) | 151, 169, 268, 394 |
| AluI | AGCT | 4 cut(s) | 151, 169, 268, 394 |
| Alw21I | GWGCWC | 2 cut(s) | 462, 486 |
| Alw26I | GTCTC | 2 cut(s) | 53, 344 |
| AlwI | GGATC | 3 cut(s) | 253, 261, 266 |
| Ama87I | CYCGRG | 2 cut(s) | 104, 161 |
| Aor13HI | TCCGGA | 1 cut(s) | 261 |
| AoxI | GGCC | 1 cut(s) | 22 |
| ApeKI | GCWGC | 1 cut(s) | 166 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 222, 254 |
| AsiGI | ACCGGT | 2 cut(s) | 62, 488 |
| Asp718I | GGTACC | 1 cut(s) | 326 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AsuC2I | CCSGG | 2 cut(s) | 251, 286 |
| AvaI | CYCGRG | 2 cut(s) | 104, 161 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| AxyI | CCTNAGG | 1 cut(s) | 420 |
| BamHI | GGATCC | 1 cut(s) | 258 |
| BanI | GGYRCC | 2 cut(s) | 65, 326 |
| BanII | GRGCYC | 3 cut(s) | 111, 291, 447 |
| BbsI | GAAGAC | 1 cut(s) | 298 |
| Bbv12I | GWGCWC | 2 cut(s) | 462, 486 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BccI | CCATC | 2 cut(s) | 98, 230 |
| BceAI | ACGGC | 1 cut(s) | 43 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 217, 251 |
| BciT130I | CCWGG | 2 cut(s) | 293, 331 |
| BciVI | GTATCC | 1 cut(s) | 420 |
| BcnI | CCSGG | 2 cut(s) | 251, 286 |
| BcoDI | GTCTC | 2 cut(s) | 53, 344 |
| BfuI | GTATCC | 1 cut(s) | 420 |
| BisI | GCNGC | 2 cut(s) | 167, 192 |
| BlsI | GCNGC | 2 cut(s) | 168, 193 |
| Bme1390I | CCNGG | 4 cut(s) | 251, 286, 293, 331 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 2 cut(s) | 104, 161 |
| BmgBI | CACGTC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 4 cut(s) | 67, 260, 290, 328 |
| BmrFI | CCNGG | 4 cut(s) | 251, 286, 293, 331 |
| BpiI | GAAGAC | 1 cut(s) | 298 |
| BpmI | CTGGAG | 2 cut(s) | 275, 377 |
| BpuEI | CTTGAG | 1 cut(s) | 500 |
| BpuMI | CCSGG | 2 cut(s) | 251, 286 |
| BsaHI | GRCGYC | 2 cut(s) | 36, 189 |
| BsaI | GGTCTC | 2 cut(s) | 53, 344 |
| BsaJI | CCNNGG | 3 cut(s) | 25, 208, 292 |
| BsaWI | WCCGGW | 3 cut(s) | 62, 261, 488 |
| Bse118I | RCCGGY | 3 cut(s) | 62, 68, 488 |
| Bse21I | CCTNAGG | 1 cut(s) | 420 |
| BseAI | TCCGGA | 1 cut(s) | 261 |
| BseBI | CCWGG | 2 cut(s) | 293, 331 |
| BseDI | CCNNGG | 3 cut(s) | 25, 208, 292 |
| BseMII | CTCAG | 3 cut(s) | 48, 355, 434 |
| BseRI | GAGGAG | 1 cut(s) | 408 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BsgI | GTGCAG | 1 cut(s) | 265 |
| BshFI | GGCC | 1 cut(s) | 24 |
| BshNI | GGYRCC | 2 cut(s) | 65, 326 |
| BshTI | ACCGGT | 2 cut(s) | 62, 488 |
| BsiHKAI | GWGCWC | 2 cut(s) | 462, 486 |
| BsiHKCI | CYCGRG | 2 cut(s) | 104, 161 |
| BsiSI | CCGG | 6 cut(s) | 63, 69, 251, 262, 285, 489 |
| BslFI | GGGAC | 1 cut(s) | 65 |
| BsmAI | GTCTC | 2 cut(s) | 53, 344 |
| BsmFI | GGGAC | 1 cut(s) | 65 |
| BsnI | GGCC | 1 cut(s) | 24 |
| Bso31I | GGTCTC | 2 cut(s) | 53, 344 |
| BsoBI | CYCGRG | 2 cut(s) | 104, 161 |
| Bsp1286I | GDGCHC | 5 cut(s) | 111, 291, 447, 462, 486 |
| Bsp13I | TCCGGA | 1 cut(s) | 261 |
| Bsp143I | GATC | 4 cut(s) | 234, 241, 253, 258 |
| BspACI | CCGC | 4 cut(s) | 87, 145, 192, 324 |
| BspANI | GGCC | 1 cut(s) | 24 |
| BspCNI | CTCAG | 3 cut(s) | 49, 354, 433 |
| BspEI | TCCGGA | 1 cut(s) | 261 |
| BspLI | GGNNCC | 4 cut(s) | 67, 260, 290, 328 |
| BspPI | GGATC | 3 cut(s) | 253, 261, 266 |
| BspQI | GCTCTTC | 1 cut(s) | 158 |
| BspT107I | GGYRCC | 2 cut(s) | 65, 326 |
| BspTNI | GGTCTC | 2 cut(s) | 53, 344 |
| BsrFI | RCCGGY | 3 cut(s) | 62, 68, 488 |
| BssAI | RCCGGY | 3 cut(s) | 62, 68, 488 |
| BssECI | CCNNGG | 3 cut(s) | 25, 208, 292 |
| BssMI | GATC | 4 cut(s) | 234, 241, 253, 258 |
| BssNI | GRCGYC | 2 cut(s) | 36, 189 |
| Bst2UI | CCWGG | 2 cut(s) | 293, 331 |
| Bst4CI | ACNGT | 4 cut(s) | 19, 115, 406, 455 |
| Bst6I | CTCTTC | 1 cut(s) | 158 |
| BstACI | GRCGYC | 2 cut(s) | 36, 189 |
| BstC8I | GCNNGC | 4 cut(s) | 70, 74, 149, 270 |
| BstDEI | CTNAG | 3 cut(s) | 57, 341, 420 |
| BstDSI | CCRYGG | 2 cut(s) | 25, 208 |
| BstKTI | GATC | 4 cut(s) | 237, 244, 256, 261 |
| BstMAI | GTCTC | 2 cut(s) | 53, 344 |
| BstMBI | GATC | 4 cut(s) | 234, 241, 253, 258 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 361 |
| BstNI | CCWGG | 2 cut(s) | 293, 331 |
| BstSCI | CCNGG | 4 cut(s) | 249, 284, 291, 329 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BstV2I | GAAGAC | 1 cut(s) | 298 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| Bsu36I | CCTNAGG | 1 cut(s) | 420 |
| BsuI | GTATCC | 1 cut(s) | 420 |
| BsuRI | GGCC | 1 cut(s) | 24 |
| BtgI | CCRYGG | 2 cut(s) | 25, 208 |
| BtrI | CACGTC | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 2 cut(s) | 402, 460 |
| Cac8I | GCNNGC | 4 cut(s) | 70, 74, 149, 270 |
| Cfr10I | RCCGGY | 3 cut(s) | 62, 68, 488 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| CseI | GACGC | 2 cut(s) | 44, 197 |
| CsiI | ACCWGGT | 1 cut(s) | 329 |
| Csp6I | GTAC | 1 cut(s) | 327 |
| CspAI | ACCGGT | 2 cut(s) | 62, 488 |
| CviJI | RGCY | 9 cut(s) | 24, 109, 151, 169, 268, 289, 364, 394, 445 |
| CviKI_1 | RGCY | 9 cut(s) | 24, 109, 151, 169, 268, 289, 364, 394, 445 |
| CviQI | GTAC | 1 cut(s) | 327 |
| DdeI | CTNAG | 3 cut(s) | 57, 341, 420 |
| DpnI | GATC | 4 cut(s) | 236, 243, 255, 260 |
| DpnII | GATC | 4 cut(s) | 234, 241, 253, 258 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 17 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 17 |
| EaeI | YGGCCR | 1 cut(s) | 22 |
| Eam1104I | CTCTTC | 1 cut(s) | 158 |
| EarI | CTCTTC | 1 cut(s) | 158 |
| Eco24I | GRGCYC | 3 cut(s) | 111, 291, 447 |
| Eco31I | GGTCTC | 2 cut(s) | 53, 344 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| Eco81I | CCTNAGG | 1 cut(s) | 420 |
| Eco88I | CYCGRG | 2 cut(s) | 104, 161 |
| EcoRII | CCWGG | 2 cut(s) | 291, 329 |
| EcoT38I | GRGCYC | 3 cut(s) | 111, 291, 447 |
| FaiI | YATR | 3 cut(s) | 378, 450, 523 |
| FaqI | GGGAC | 1 cut(s) | 65 |
| FauI | CCCGC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 2 cut(s) | 167, 192 |
| FriOI | GRGCYC | 3 cut(s) | 111, 291, 447 |
| Fsp4HI | GCNGC | 2 cut(s) | 167, 192 |
| GluI | GCNGC | 2 cut(s) | 167, 192 |
| GsuI | CTGGAG | 2 cut(s) | 275, 377 |
| HaeIII | GGCC | 1 cut(s) | 24 |
| HapII | CCGG | 6 cut(s) | 63, 69, 251, 262, 285, 489 |
| HgaI | GACGC | 2 cut(s) | 44, 197 |
| Hin1I | GRCGYC | 2 cut(s) | 36, 189 |
| HindIII | AAGCTT | 1 cut(s) | 266 |
| HinfI | GANTC | 2 cut(s) | 297, 399 |
| HpaII | CCGG | 6 cut(s) | 63, 69, 251, 262, 285, 489 |
| Hpy166II | GTNNAC | 3 cut(s) | 100, 130, 373 |
| Hpy188I | TCNGA | 3 cut(s) | 58, 258, 398 |
| Hpy188III | TCNNGA | 1 cut(s) | 262 |
| Hpy8I | GTNNAC | 3 cut(s) | 100, 130, 373 |
| Hpy99I | CGWCG | 5 cut(s) | 23, 35, 38, 125, 242 |
| HpyAV | CCTTC | 3 cut(s) | 49, 58, 423 |
| HpyCH4III | ACNGT | 4 cut(s) | 19, 115, 406, 455 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 1 cut(s) | 282 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 361 |
| HpyF3I | CTNAG | 3 cut(s) | 57, 341, 420 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92I | GRCGYC | 2 cut(s) | 36, 189 |
| Kpn2I | TCCGGA | 1 cut(s) | 261 |
| KpnI | GGTACC | 1 cut(s) | 330 |
| KroI | GCCGGC | 1 cut(s) | 68 |
| KroNI | GCCGGC | 1 cut(s) | 70 |
| Kzo9I | GATC | 4 cut(s) | 234, 241, 253, 258 |
| LguI | GCTCTTC | 1 cut(s) | 158 |
| LmnI | GCTCC | 1 cut(s) | 294 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| MabI | ACCWGGT | 1 cut(s) | 329 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MaeIII | GTNAC | 1 cut(s) | 212 |
| MalI | GATC | 4 cut(s) | 236, 243, 255, 260 |
| MboI | GATC | 4 cut(s) | 234, 241, 253, 258 |
| MboII | GAAGA | 4 cut(s) | 43, 85, 145, 298 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 5 cut(s) | 111, 291, 447, 462, 486 |
| MnlI | CCTC | 5 cut(s) | 113, 118, 178, 354, 429 |
| MroI | TCCGGA | 1 cut(s) | 261 |
| MroNI | GCCGGC | 1 cut(s) | 68 |
| MslI | CAYNNNNRTG | 2 cut(s) | 489, 491 |
| MspI | CCGG | 6 cut(s) | 63, 69, 251, 262, 285, 489 |
| MspR9I | CCNGG | 4 cut(s) | 251, 286, 293, 331 |
| MvaI | CCWGG | 2 cut(s) | 293, 331 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 361 |
| NaeI | GCCGGC | 1 cut(s) | 70 |
| NciI | CCSGG | 2 cut(s) | 251, 286 |
| NdeII | GATC | 4 cut(s) | 234, 241, 253, 258 |
| NgoMIV | GCCGGC | 1 cut(s) | 68 |
| NlaIV | GGNNCC | 4 cut(s) | 67, 260, 290, 328 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| OliI | CACNNNNGTG | 2 cut(s) | 489, 491 |
| PaeR7I | CTCGAG | 1 cut(s) | 104 |
| PciSI | GCTCTTC | 1 cut(s) | 158 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 27, 102, 111 |
| PdiI | GCCGGC | 1 cut(s) | 70 |
| PfeI | GAWTC | 2 cut(s) | 297, 399 |
| PflFI | GACNNNGTC | 1 cut(s) | 125 |
| PinAI | ACCGGT | 2 cut(s) | 62, 488 |
| PkrI | GCNGC | 2 cut(s) | 168, 193 |
| Psp6I | CCWGG | 2 cut(s) | 291, 329 |
| PspGI | CCWGG | 2 cut(s) | 291, 329 |
| PspN4I | GGNNCC | 4 cut(s) | 67, 260, 290, 328 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| PspXI | VCTCGAGB | 1 cut(s) | 104 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| PsyI | GACNNNGTC | 1 cut(s) | 125 |
| RsaI | GTAC | 1 cut(s) | 328 |
| RsaNI | GTAC | 1 cut(s) | 327 |
| RseI | CAYNNNNRTG | 2 cut(s) | 489, 491 |
| SapI | GCTCTTC | 1 cut(s) | 158 |
| SatI | GCNGC | 2 cut(s) | 167, 192 |
| Sau3AI | GATC | 4 cut(s) | 234, 241, 253, 258 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| ScrFI | CCNGG | 4 cut(s) | 251, 286, 293, 331 |
| SduI | GDGCHC | 5 cut(s) | 111, 291, 447, 462, 486 |
| SexAI | ACCWGGT | 1 cut(s) | 329 |
| Sfr274I | CTCGAG | 1 cut(s) | 104 |
| SgrAI | CRCCGGYG | 1 cut(s) | 488 |
| SinI | GGWCC | 1 cut(s) | 127 |
| SlaI | CTCGAG | 1 cut(s) | 104 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 489, 491 |
| SmlI | CTYRAG | 2 cut(s) | 104, 479 |
| SmoI | CTYRAG | 2 cut(s) | 104, 479 |
| SsiI | CCGC | 4 cut(s) | 87, 145, 192, 324 |
| StyD4I | CCNGG | 4 cut(s) | 249, 284, 291, 329 |
| TaaI | ACNGT | 4 cut(s) | 19, 115, 406, 455 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TaqI | TCGA | 4 cut(s) | 105, 120, 240, 507 |
| TauI | GCSGC | 1 cut(s) | 194 |
| TfiI | GAWTC | 2 cut(s) | 297, 399 |
| TscAI | CASTG | 2 cut(s) | 409, 460 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 1 cut(s) | 166 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspRI | CASTG | 2 cut(s) | 409, 460 |
| Tth111I | GACNNNGTC | 1 cut(s) | 125 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XhoI | CTCGAG | 1 cut(s) | 104 |