squalene
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAD_binding_3 | PF01494 | 3 - 37 | 3.9e-06 | FAD binding domain |
| Pyr_redox_2 | PF07992 | 4 - 40 | 3.3e-06 | Pyridine nucleotide-disulphide oxidoreductase |
| DAO | PF01266 | 5 - 35 | 1.3e-08 | FAD dependent oxidoreductase |
| FAD_binding_2 | PF00890 | 5 - 34 | 4.5e-06 | FAD binding domain |
| NAD_binding_8 | PF13450 | 8 - 34 | 4.5e-06 | NAD(P)-binding Rossmann-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 183 |
| AfaI | GTAC | 1 cut(s) | 87 |
| AflIII | ACRYGT | 1 cut(s) | 88 |
| AjnI | CCWGG | 2 cut(s) | 68, 145 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| Alw26I | GTCTC | 1 cut(s) | 96 |
| AlwI | GGATC | 1 cut(s) | 183 |
| Ama87I | CYCGRG | 1 cut(s) | 179 |
| ApeKI | GCWGC | 2 cut(s) | 47, 142 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| AvaI | CYCGRG | 1 cut(s) | 179 |
| BbvI | GCAGC | 2 cut(s) | 59, 154 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 170, 204 |
| BciT130I | CCWGG | 2 cut(s) | 70, 147 |
| BcoDI | GTCTC | 1 cut(s) | 96 |
| BisI | GCNGC | 2 cut(s) | 48, 143 |
| BlsI | GCNGC | 2 cut(s) | 49, 144 |
| Bme1390I | CCNGG | 2 cut(s) | 70, 147 |
| BmeT110I | CYCGRG | 1 cut(s) | 179 |
| BmrFI | CCNGG | 2 cut(s) | 70, 147 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 2 cut(s) | 69, 146 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| BseBI | CCWGG | 2 cut(s) | 70, 147 |
| BseDI | CCNNGG | 2 cut(s) | 69, 146 |
| BseMII | CTCAG | 1 cut(s) | 102 |
| BseXI | GCAGC | 2 cut(s) | 59, 154 |
| BsgI | GTGCAG | 1 cut(s) | 66 |
| BsiHKCI | CYCGRG | 1 cut(s) | 179 |
| BsiSI | CCGG | 1 cut(s) | 42 |
| BsmAI | GTCTC | 1 cut(s) | 96 |
| BsoBI | CYCGRG | 1 cut(s) | 179 |
| Bsp1407I | TGTACA | 1 cut(s) | 85 |
| Bsp143I | GATC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 1 cut(s) | 103 |
| BspPI | GGATC | 1 cut(s) | 183 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrGI | TGTACA | 1 cut(s) | 85 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 2 cut(s) | 69, 146 |
| BssMI | GATC | 1 cut(s) | 175 |
| Bst2UI | CCWGG | 2 cut(s) | 70, 147 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 53 |
| BstAUI | TGTACA | 1 cut(s) | 85 |
| BstDEI | CTNAG | 2 cut(s) | 111, 210 |
| BstEII | GGTNACC | 1 cut(s) | 131 |
| BstKTI | GATC | 1 cut(s) | 178 |
| BstMAI | GTCTC | 1 cut(s) | 96 |
| BstMBI | GATC | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 53 |
| BstNI | CCWGG | 2 cut(s) | 70, 147 |
| BstNSI | RCATGY | 1 cut(s) | 92 |
| BstPI | GGTNACC | 1 cut(s) | 131 |
| BstSCI | CCNGG | 2 cut(s) | 68, 145 |
| BstV1I | GCAGC | 2 cut(s) | 59, 154 |
| BstX2I | RGATCY | 1 cut(s) | 175 |
| BstYI | RGATCY | 1 cut(s) | 175 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Csp6I | GTAC | 1 cut(s) | 86 |
| CviAII | CATG | 1 cut(s) | 89 |
| CviJI | RGCY | 3 cut(s) | 50, 115, 145 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 115, 145 |
| CviQI | GTAC | 1 cut(s) | 86 |
| DdeI | CTNAG | 2 cut(s) | 111, 210 |
| DpnI | GATC | 1 cut(s) | 177 |
| DpnII | GATC | 1 cut(s) | 175 |
| Eco88I | CYCGRG | 1 cut(s) | 179 |
| Eco91I | GGTNACC | 1 cut(s) | 131 |
| EcoO65I | GGTNACC | 1 cut(s) | 131 |
| EcoRII | CCWGG | 2 cut(s) | 68, 145 |
| FaeI | CATG | 1 cut(s) | 92 |
| FaiI | YATR | 1 cut(s) | 90 |
| FatI | CATG | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 143 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 143 |
| GluI | GCNGC | 2 cut(s) | 48, 143 |
| HapII | CCGG | 1 cut(s) | 42 |
| Hin1II | CATG | 1 cut(s) | 92 |
| HinfI | GANTC | 1 cut(s) | 197 |
| HpaII | CCGG | 1 cut(s) | 42 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 1 cut(s) | 35 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 86 |
| HpyAV | CCTTC | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 3 cut(s) | 47, 142, 191 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 53 |
| HpyF3I | CTNAG | 2 cut(s) | 111, 210 |
| Hsp92II | CATG | 1 cut(s) | 92 |
| Kzo9I | GATC | 1 cut(s) | 175 |
| LpnPI | CCDG | 6 cut(s) | 55, 55, 82, 132, 149, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 59, 154 |
| LweI | GCATC | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 131 |
| MalI | GATC | 1 cut(s) | 177 |
| MboI | GATC | 1 cut(s) | 175 |
| MflI | RGATCY | 1 cut(s) | 175 |
| MluCI | AATT | 1 cut(s) | 123 |
| MlyI | GAGTC | 1 cut(s) | 206 |
| MmeI | TCCRAC | 2 cut(s) | 13, 153 |
| MnlI | CCTC | 1 cut(s) | 175 |
| MspI | CCGG | 1 cut(s) | 42 |
| MspR9I | CCNGG | 2 cut(s) | 70, 147 |
| MvaI | CCWGG | 2 cut(s) | 70, 147 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 53 |
| NdeII | GATC | 1 cut(s) | 175 |
| NlaIII | CATG | 1 cut(s) | 92 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| NspI | RCATGY | 1 cut(s) | 92 |
| PaeR7I | CTCGAG | 1 cut(s) | 179 |
| PciI | ACATGT | 1 cut(s) | 88 |
| PkrI | GCNGC | 2 cut(s) | 49, 144 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| PscI | ACATGT | 1 cut(s) | 88 |
| Psp6I | CCWGG | 2 cut(s) | 68, 145 |
| PspEI | GGTNACC | 1 cut(s) | 131 |
| PspGI | CCWGG | 2 cut(s) | 68, 145 |
| PsuI | RGATCY | 1 cut(s) | 175 |
| RsaI | GTAC | 1 cut(s) | 87 |
| RsaNI | GTAC | 1 cut(s) | 86 |
| SatI | GCNGC | 2 cut(s) | 48, 143 |
| Sau3AI | GATC | 1 cut(s) | 175 |
| SchI | GAGTC | 1 cut(s) | 206 |
| ScrFI | CCNGG | 2 cut(s) | 70, 147 |
| SetI | ASST | 3 cut(s) | 52, 79, 138 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| Sfr274I | CTCGAG | 1 cut(s) | 179 |
| SlaI | CTCGAG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 2 cut(s) | 158, 179 |
| SmoI | CTYRAG | 2 cut(s) | 158, 179 |
| Sse9I | AATT | 1 cut(s) | 123 |
| StyD4I | CCNGG | 2 cut(s) | 68, 145 |
| TaqI | TCGA | 2 cut(s) | 96, 180 |
| TasI | AATT | 1 cut(s) | 123 |
| TatI | WGTACW | 1 cut(s) | 85 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| TseI | GCWGC | 2 cut(s) | 47, 142 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XceI | RCATGY | 1 cut(s) | 92 |
| XhoI | CTCGAG | 1 cut(s) | 179 |