Prupe.8G156800_v2.0.a1

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000108
Physical Location & Seq
Reverse (-)
16747285 .. 16750818
3534 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G156800.1

Sequence Viewer

Length: 1611 bp
ATGGTTTACCAGTATGTTCTTGGTGGGGTCTTGGTTTCTCTGCTGGGCTCTGTTTTTTTCATGATCATAAACAGTACTCTGAGCGGAAAGAAGAAGGCCGAAGATGTTTCAGAGGATGTTAATGGAAATGGGTTTGTCCGGACTCAGCCGGCTAACGGTGGTTGCCTGCCGGAGATTGAGAAGAGTACGGACGTTGTCATTGTCGGCGCCGGAGTTGCTGGTGCTGCTCTTGCTTACACTCTTGGGAAGGAAGGACGCCGTGTACATGTGATTGAAAGAGACTTGAGTGAGCCAGACAGAATTGTTGGTGAACTATTGCAGCCTGGAGGCTATCTTAAATTGATTGAGTTGGGTCTTGAGGATTGTGCAAATGAGTCCATTGATGCCCAGAAAGTGTTTGGTTATGCTCTTTACAAGAATGGGAATGACACCAAACTGTCTTATCCCTTGGAAAACTATTCTTCAGATATTGCCGGGAGAAGTTTCCACAACGGGCGTTTCATCCAGAGAATGCGTGAAAGAGTTGCAACTCTTCCAAATGTGACTTTGGAACAAGGAACAGTGACAACCCTACTTGAAGAAAAGGGCATCGTCAAGGGTGTGATGTACAAGAACAAGGCTGGAGAGGAGATGAGATCATATGCTCCACTAACAATCGTATGTGATGGTTGCTTTTCAAATCTCCGCCGCAACCTCTGTACTCCAAAGGTTGATAGTCCTTCTTGCTTTGTTGGTTTGATATTGGAGAACTGTGACCTTCCTCATGCAAACCATGGACATGTGATCTTGGGAGACCCTTCACCCATCTTGTTTTACCCTATCAGTAGCACAGAGATTCGTTGTTTGGTCGATGTACCTGGCACAAAAGTACCTTCAGTAGCTAATGGTGATATGGCCAAGTACTTGAAAACTGTGGTGGCTCCTCAGGTTCCCCCTCAGCTCTTAAAGGCTTTTATAGCAGCAATTGAGAAAGGAAACATCAGAACCATGCAAAACAAGAGCATGCCTGCCACTCCTCTTCCCACTCCTGGTGCACTTTTATTGGGGGATTCATTCAACATGAGACATCCTTTAACCGGAGGAGGAATGACTGTGGCTCTTTCAGACATTGTTCTTCTAAGGGATCTTCTCAGACCCCTAACCGATCTCAATGATGCACCTGCTTTGTGCGAATATCTCGAATCATTCTACACACTGCGCAAGCCTGTGTCATCTACCATAAACACATTGGCCGGTGCCTTGTACAAGGTGTTTTGTGCGTCACCTGACCCAGCAAGACAAGAAATGCGAGATGCATGTTTTGACTATTTGAGCCTGGGAGGCATCTGCTCGTATGGACCTGTATCTCTGCTCTCTGGTCTTAACCCTCGTCCGATGCACTTGTTTCTCCATTTCTTTGCCGTGGCTGTCTATGGAGTCGGCCGCCTAATGATTCCATTCCCTACCCCGCAACGCATGTGGCTCGGGACTAGATTGATCTTGGGTGCGTCAGGAATCATATTCCCCATCATTAAGGGTGAAGGAGTTCGACAAATGTTCTTCCCTGCAACAATCCCAGCATACTACAGAGCTCCTCCTGCTCCTCTAGAAAACAAGATAAAAGCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

537

Amino Acids

58.27

Weight (kDa)

8.15

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1168
Acc16I TGCGCA 1 cut(s) 1199
Acc36I ACCTGC 1 cut(s) 1168
AccB1I GGYRCC 2 cut(s) 206, 1235
AccBSI CCGCTC 1 cut(s) 84
AccIII TCCGGA 1 cut(s) 138
AciI CCGC 5 cut(s) 84, 685, 688, 1423, 1448
AclWI GGATC 1 cut(s) 1131
AcoI YGGCCR 3 cut(s) 894, 1230, 1420
AcuI CTGAAG 2 cut(s) 447, 858
AcyI GRCGYC 2 cut(s) 207, 256
AfaI GTAC 9 cut(s) 76, 187, 264, 608, 700, 855, 870, 902, 1244
AfiI CCNNNNNNNGG 3 cut(s) 155, 1028, 1076
AflIII ACRYGT 2 cut(s) 265, 778
AgsI TTSAA 5 cut(s) 275, 578, 678, 907, 1057
AjnI CCWGG 4 cut(s) 322, 856, 1027, 1314
AluBI AGCT 3 cut(s) 881, 940, 1571
AluI AGCT 3 cut(s) 881, 940, 1571
Alw21I GWGCWC 2 cut(s) 1036, 1573
Alw26I GTCTC 3 cut(s) 273, 786, 1057
Alw44I GTGCAC 1 cut(s) 1032
AlwI GGATC 1 cut(s) 1131
Ama87I CYCGRG 1 cut(s) 1463
Aor13HI TCCGGA 1 cut(s) 138
AoxI GGCC 4 cut(s) 96, 894, 1230, 1420
ApaLI GTGCAC 1 cut(s) 1032
ApeKI GCWGC 3 cut(s) 224, 319, 959
Asp700I GAANNNNTTC 1 cut(s) 1524
AspLEI GCGC 2 cut(s) 209, 1200
AspS9I GGNCC 1 cut(s) 1337
AsuC2I CCSGG 1 cut(s) 475
AsuHPI GGTGA 5 cut(s) 320, 792, 899, 1254, 1529
AvaI CYCGRG 1 cut(s) 1463
AvaII GGWCC 1 cut(s) 1337
AxyI CCTNAGG 1 cut(s) 924
BaeGI GKGCMC 1 cut(s) 1036
BaeI ACNNNNGTAYC 2 cut(s) 852, 885
BalI TGGCCA 1 cut(s) 896
BanI GGYRCC 2 cut(s) 206, 1235
BanII GRGCYC 2 cut(s) 50, 1573
Bbv12I GWGCWC 2 cut(s) 1036, 1573
BbvCI CCTCAGC 1 cut(s) 936
BbvI GCAGC 3 cut(s) 211, 331, 971
BccI CCATC 3 cut(s) 659, 812, 1514
BceAI ACGGC 2 cut(s) 243, 1385
BcgI CGANNNNNNTGC 2 cut(s) 1444, 1478
BciT130I CCWGG 4 cut(s) 324, 858, 1029, 1316
BclI TGATCA 1 cut(s) 63
BcnI CCSGG 1 cut(s) 475
BcoDI GTCTC 3 cut(s) 273, 786, 1057
BfaI CTAG 2 cut(s) 1470, 1586
BfmI CTRYAG 1 cut(s) 1564
BfoI RGCGCY 1 cut(s) 210
BfuAI ACCTGC 1 cut(s) 1168
BglI GCCNNNNNGGC 1 cut(s) 1320
BisI GCNGC 5 cut(s) 225, 320, 688, 960, 1423
BlsI GCNGC 5 cut(s) 226, 321, 689, 961, 1424
BmcAI AGTACT 2 cut(s) 76, 902
Bme1390I CCNGG 5 cut(s) 324, 475, 858, 1029, 1316
Bme18I GGWCC 1 cut(s) 1337
BmeT110I CYCGRG 1 cut(s) 1463
BmgT120I GGNCC 1 cut(s) 1337
BmiI GGNNCC 4 cut(s) 208, 921, 930, 1237
BmrFI CCNGG 5 cut(s) 324, 475, 858, 1029, 1316
BmsI GCATC 6 cut(s) 373, 597, 1144, 1282, 1332, 1365
BpmI CTGGAG 2 cut(s) 345, 642
Bpu10I CCTNAGC 1 cut(s) 936
BpuEI CTTGAG 2 cut(s) 304, 377
BpuMI CCSGG 1 cut(s) 475
BsaHI GRCGYC 2 cut(s) 207, 256
BsaI GGTCTC 1 cut(s) 786
BsaJI CCNNGG 4 cut(s) 447, 772, 1315, 1401
BsaWI WCCGGW 2 cut(s) 138, 1076
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 1028, 1076
Bse118I RCCGGY 2 cut(s) 148, 1232
Bse1I ACTGG 1 cut(s) 10
Bse21I CCTNAGG 1 cut(s) 924
BseAI TCCGGA 1 cut(s) 138
BseBI CCWGG 4 cut(s) 324, 858, 1029, 1316
BseDI CCNNGG 4 cut(s) 447, 772, 1315, 1401
BseGI GGATG 3 cut(s) 121, 501, 1066
BseLI CCNNNNNNNGG 3 cut(s) 155, 1028, 1076
BseMII CTCAG 5 cut(s) 71, 158, 938, 950, 1144
BseNI ACTGG 1 cut(s) 10
BseRI GAGGAG 6 cut(s) 641, 912, 1005, 1095, 1563, 1572
BseSI GKGCMC 1 cut(s) 1036
BseX3I CGGCCG 1 cut(s) 1420
BseXI GCAGC 3 cut(s) 211, 331, 971
BseYI CCCAGC 3 cut(s) 43, 1270, 1555
Bsh1285I CGRYCG 1 cut(s) 1423
BshFI GGCC 4 cut(s) 98, 896, 1232, 1422
BshNI GGYRCC 2 cut(s) 206, 1235
BsiEI CGRYCG 1 cut(s) 1423
BsiHKAI GWGCWC 2 cut(s) 1036, 1573
BsiHKCI CYCGRG 1 cut(s) 1463
BsiSI CCGG 7 cut(s) 139, 149, 170, 210, 474, 1077, 1233
BslFI GGGAC 1 cut(s) 1480
BslI CCNNNNNNNGG 3 cut(s) 155, 1028, 1076
BsmAI GTCTC 3 cut(s) 273, 786, 1057
BsmFI GGGAC 1 cut(s) 1480
BsmI GAATGC 1 cut(s) 516
BsnI GGCC 4 cut(s) 98, 896, 1232, 1422
Bso31I GGTCTC 1 cut(s) 786
BsoBI CYCGRG 1 cut(s) 1463
Bsp1286I GDGCHC 3 cut(s) 50, 1036, 1573
Bsp13I TCCGGA 1 cut(s) 138
Bsp1407I TGTACA 3 cut(s) 262, 606, 1242
Bsp143I GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
Bsp19I CCATGG 1 cut(s) 772
BspACI CCGC 5 cut(s) 84, 685, 688, 1423, 1448
BspANI GGCC 4 cut(s) 98, 896, 1232, 1422
BspCNI CTCAG 5 cut(s) 72, 157, 937, 949, 1143
BspEI TCCGGA 1 cut(s) 138
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 4 cut(s) 208, 921, 930, 1237
BspMI ACCTGC 1 cut(s) 1168
BspPI GGATC 1 cut(s) 1131
BspT107I GGYRCC 2 cut(s) 206, 1235
BspTNI GGTCTC 1 cut(s) 786
BsrBI CCGCTC 1 cut(s) 84
BsrFI RCCGGY 2 cut(s) 148, 1232
BsrGI TGTACA 3 cut(s) 262, 606, 1242
BsrI ACTGG 1 cut(s) 10
BssAI RCCGGY 2 cut(s) 148, 1232
BssECI CCNNGG 4 cut(s) 447, 772, 1315, 1401
BssMI GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
BssNI GRCGYC 2 cut(s) 207, 256
BssT1I CCWWGG 2 cut(s) 447, 772
Bst2UI CCWGG 4 cut(s) 324, 858, 1029, 1316
Bst4CI ACNGT 7 cut(s) 74, 158, 438, 562, 752, 913, 1093
Bst6I CTCTTC 3 cut(s) 176, 537, 1023
BstACI GRCGYC 2 cut(s) 207, 256
BstAUI TGTACA 3 cut(s) 262, 606, 1242
BstC8I GCNNGC 5 cut(s) 150, 167, 1004, 1008, 1202
BstDEI CTNAG 6 cut(s) 80, 144, 924, 936, 1118, 1130
BstDSI CCRYGG 2 cut(s) 772, 1401
BstF5I GGATG 3 cut(s) 121, 501, 1066
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 2 cut(s) 209, 1200
BstKTI GATC 6 cut(s) 66, 638, 786, 1126, 1147, 1479
BstMAI GTCTC 3 cut(s) 273, 786, 1057
BstMBI GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
BstMCI CGRYCG 1 cut(s) 1423
BstMWI GCNNNNNNNGC 6 cut(s) 215, 224, 230, 956, 1320, 1577
BstNI CCWGG 4 cut(s) 324, 858, 1029, 1316
BstNSI RCATGY 5 cut(s) 269, 782, 1006, 1299, 1459
BstSCI CCNGG 5 cut(s) 322, 473, 856, 1027, 1314
BstSFI CTRYAG 1 cut(s) 1564
BstSLI GKGCMC 1 cut(s) 1036
BstV1I GCAGC 3 cut(s) 211, 331, 971
BstX2I RGATCY 1 cut(s) 1123
BstYI RGATCY 1 cut(s) 1123
BstZI CGGCCG 1 cut(s) 1420
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 4 cut(s) 98, 896, 1232, 1422
BtgI CCRYGG 2 cut(s) 772, 1401
BtsCI GGATG 3 cut(s) 121, 501, 1066
BtsI GCAGTG 1 cut(s) 1193
BtsIMutI CAGTG 2 cut(s) 567, 1193
BveI ACCTGC 1 cut(s) 1168
Cac8I GCNNGC 5 cut(s) 150, 167, 1004, 1008, 1202
CciI TCATGA 1 cut(s) 60
CfoI GCGC 2 cut(s) 209, 1200
Cfr10I RCCGGY 2 cut(s) 148, 1232
Cfr13I GGNCC 1 cut(s) 1337
CseI GACGC 3 cut(s) 264, 1248, 1476
Csp6I GTAC 9 cut(s) 75, 186, 263, 607, 699, 854, 869, 901, 1243
CspCI CAANNNNNGTGG 2 cut(s) 1439, 1474
CviQI GTAC 9 cut(s) 75, 186, 263, 607, 699, 854, 869, 901, 1243
DdeI CTNAG 6 cut(s) 80, 144, 924, 936, 1118, 1130
DinI GGCGCC 1 cut(s) 208
DpnI GATC 6 cut(s) 65, 637, 785, 1125, 1146, 1478
DpnII GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
EaeI YGGCCR 3 cut(s) 894, 1230, 1420
EagI CGGCCG 1 cut(s) 1420
Eam1104I CTCTTC 3 cut(s) 176, 537, 1023
EarI CTCTTC 3 cut(s) 176, 537, 1023
EciI GGCGGA 1 cut(s) 674
Ecl136II GAGCTC 1 cut(s) 1571
EclXI CGGCCG 1 cut(s) 1420
Eco130I CCWWGG 2 cut(s) 447, 772
Eco24I GRGCYC 2 cut(s) 50, 1573
Eco31I GGTCTC 1 cut(s) 786
Eco47I GGWCC 1 cut(s) 1337
Eco52I CGGCCG 1 cut(s) 1420
Eco53kI GAGCTC 1 cut(s) 1571
Eco57I CTGAAG 2 cut(s) 447, 858
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 1463
EcoICRI GAGCTC 1 cut(s) 1571
EcoRII CCWGG 4 cut(s) 322, 856, 1027, 1314
EcoT14I CCWWGG 2 cut(s) 447, 772
EcoT22I ATGCAT 1 cut(s) 1297
EcoT38I GRGCYC 2 cut(s) 50, 1573
EgeI GGCGCC 1 cut(s) 208
EheI GGCGCC 1 cut(s) 208
ErhI CCWWGG 2 cut(s) 447, 772
FaqI GGGAC 1 cut(s) 1480
FauI CCCGC 1 cut(s) 1455
FauNDI CATATG 1 cut(s) 640
FbaI TGATCA 1 cut(s) 63
Fnu4HI GCNGC 5 cut(s) 225, 320, 688, 960, 1423
FokI GGATG 3 cut(s) 128, 488, 1053
FriOI GRGCYC 2 cut(s) 50, 1573
Fsp4HI GCNGC 5 cut(s) 225, 320, 688, 960, 1423
FspBI CTAG 2 cut(s) 1470, 1586
FspI TGCGCA 1 cut(s) 1199
GlaI GCGC 2 cut(s) 208, 1199
GluI GCNGC 5 cut(s) 225, 320, 688, 960, 1423
GsaI CCCAGC 3 cut(s) 47, 1274, 1559
GsuI CTGGAG 2 cut(s) 345, 642
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 4 cut(s) 98, 896, 1232, 1422
HapII CCGG 7 cut(s) 139, 149, 170, 210, 474, 1077, 1233
HgaI GACGC 3 cut(s) 264, 1248, 1476
HhaI GCGC 2 cut(s) 209, 1200
Hin1I GRCGYC 2 cut(s) 207, 256
Hin6I GCGC 2 cut(s) 207, 1198
HinP1I GCGC 2 cut(s) 207, 1198
HinfI GANTC 8 cut(s) 142, 374, 835, 1049, 1181, 1416, 1432, 1494
HpaII CCGG 7 cut(s) 139, 149, 170, 210, 474, 1077, 1233
HphI GGTGA 5 cut(s) 320, 792, 899, 1254, 1529
Hpy166II GTNNAC 4 cut(s) 7, 263, 311, 1034
Hpy188I TCNGA 7 cut(s) 81, 112, 466, 983, 1105, 1133, 1374
Hpy188III TCNNGA 8 cut(s) 61, 139, 356, 505, 1178, 1465, 1491, 1586
Hpy8I GTNNAC 4 cut(s) 7, 263, 311, 1034
HpyAV CCTTC 8 cut(s) 88, 241, 245, 729, 767, 807, 882, 1514
HpyCH4III ACNGT 7 cut(s) 74, 158, 438, 562, 752, 913, 1093
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 224, 230, 956, 1320, 1577
HpyF3I CTNAG 6 cut(s) 80, 144, 924, 936, 1118, 1130
HpySE526I ACGT 1 cut(s) 192
Hsp92I GRCGYC 2 cut(s) 207, 256
HspAI GCGC 2 cut(s) 207, 1198
KasI GGCGCC 1 cut(s) 206
Kpn2I TCCGGA 1 cut(s) 138
KroI GCCGGC 1 cut(s) 148
KroNI GCCGGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 63
Kzo9I GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
LmnI GCTCC 4 cut(s) 649, 925, 1576, 1585
Lsp1109I GCAGC 3 cut(s) 211, 331, 971
LweI GCATC 6 cut(s) 373, 597, 1144, 1282, 1332, 1365
MaeI CTAG 2 cut(s) 1470, 1586
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 4 cut(s) 541, 562, 752, 1260
MalI GATC 6 cut(s) 65, 637, 785, 1125, 1146, 1478
MbiI CCGCTC 1 cut(s) 84
MboI GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
MfeI CAATTG 1 cut(s) 963
MflI RGATCY 1 cut(s) 1123
MhlI GDGCHC 3 cut(s) 50, 1036, 1573
MlsI TGGCCA 1 cut(s) 896
MluCI AATT 3 cut(s) 300, 338, 963
MluNI TGGCCA 1 cut(s) 896
Mly113I GGCGCC 1 cut(s) 207
MlyI GAGTC 3 cut(s) 136, 383, 1425
Mox20I TGGCCA 1 cut(s) 896
Mph1103I ATGCAT 1 cut(s) 1297
MroI TCCGGA 1 cut(s) 138
MroNI GCCGGC 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 1524
MscI TGGCCA 1 cut(s) 896
MseI TTAA 6 cut(s) 120, 336, 944, 1073, 1362, 1512
MslI CAYNNNNRTG 1 cut(s) 777
Msp20I TGGCCA 1 cut(s) 896
MspI CCGG 7 cut(s) 139, 149, 170, 210, 474, 1077, 1233
MspR9I CCNGG 5 cut(s) 324, 475, 858, 1029, 1316
MunI CAATTG 1 cut(s) 963
Mva1269I GAATGC 1 cut(s) 516
MvaI CCWGG 4 cut(s) 324, 858, 1029, 1316
MwoI GCNNNNNNNGC 6 cut(s) 215, 224, 230, 956, 1320, 1577
NaeI GCCGGC 1 cut(s) 150
NarI GGCGCC 1 cut(s) 207
NciI CCSGG 1 cut(s) 475
NcoI CCATGG 1 cut(s) 772
NdeI CATATG 1 cut(s) 640
NdeII GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
NgoMIV GCCGGC 1 cut(s) 148
NlaIV GGNNCC 4 cut(s) 208, 921, 930, 1237
NmuCI GTSAC 4 cut(s) 541, 562, 752, 1260
NsbI TGCGCA 1 cut(s) 1199
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 5 cut(s) 269, 782, 1006, 1299, 1459
PaeI GCATGC 1 cut(s) 1006
PagI TCATGA 1 cut(s) 60
PaqCI CACCTGC 1 cut(s) 1168
PciI ACATGT 2 cut(s) 265, 778
PctI GAATGC 1 cut(s) 516
PdiI GCCGGC 1 cut(s) 150
PdmI GAANNNNTTC 1 cut(s) 1524
PfeI GAWTC 5 cut(s) 835, 1049, 1181, 1432, 1494
PflFI GACNNNGTC 1 cut(s) 194
PkrI GCNGC 5 cut(s) 226, 321, 689, 961, 1424
PleI GAGTC 3 cut(s) 136, 382, 1424
PluTI GGCGCC 1 cut(s) 210
PpsI GAGTC 3 cut(s) 136, 382, 1424
PscI ACATGT 2 cut(s) 265, 778
Psp124BI GAGCTC 1 cut(s) 1573
Psp6I CCWGG 4 cut(s) 322, 856, 1027, 1314
PspFI CCCAGC 3 cut(s) 43, 1270, 1555
PspGI CCWGG 4 cut(s) 322, 856, 1027, 1314
PspN4I GGNNCC 4 cut(s) 208, 921, 930, 1237
PspPI GGNCC 1 cut(s) 1337
PsuI RGATCY 1 cut(s) 1123
PsyI GACNNNGTC 1 cut(s) 194
RsaI GTAC 9 cut(s) 76, 187, 264, 608, 700, 855, 870, 902, 1244
RsaNI GTAC 9 cut(s) 75, 186, 263, 607, 699, 854, 869, 901, 1243
RseI CAYNNNNRTG 1 cut(s) 777
SacI GAGCTC 1 cut(s) 1573
SaqAI TTAA 6 cut(s) 120, 336, 944, 1073, 1362, 1512
SatI GCNGC 5 cut(s) 225, 320, 688, 960, 1423
Sau3AI GATC 6 cut(s) 63, 635, 783, 1123, 1144, 1476
Sau96I GGNCC 1 cut(s) 1337
ScaI AGTACT 2 cut(s) 76, 902
SchI GAGTC 3 cut(s) 136, 383, 1425
ScrFI CCNGG 5 cut(s) 324, 475, 858, 1029, 1316
SduI GDGCHC 3 cut(s) 50, 1036, 1573
SfaNI GCATC 6 cut(s) 373, 597, 1144, 1282, 1332, 1365
SfcI CTRYAG 1 cut(s) 1564
SfoI GGCGCC 1 cut(s) 208
SinI GGWCC 1 cut(s) 1337
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 2 cut(s) 283, 356
SmoI CTYRAG 2 cut(s) 283, 356
SphI GCATGC 1 cut(s) 1006
Sse9I AATT 3 cut(s) 300, 338, 963
SsiI CCGC 5 cut(s) 84, 685, 688, 1423, 1448
SspDI GGCGCC 1 cut(s) 206
SspMI CTAG 2 cut(s) 1470, 1586
SstI GAGCTC 1 cut(s) 1573
StyD4I CCNGG 5 cut(s) 322, 473, 856, 1027, 1314
StyI CCWWGG 2 cut(s) 447, 772
TaaI ACNGT 7 cut(s) 74, 158, 438, 562, 752, 913, 1093
TaiI ACGT 1 cut(s) 195
TaqI TCGA 3 cut(s) 849, 1179, 1528
TasI AATT 3 cut(s) 300, 338, 963
TatI WGTACW 6 cut(s) 74, 262, 606, 698, 900, 1242
TauI GCSGC 2 cut(s) 690, 1425
TfiI GAWTC 5 cut(s) 835, 1049, 1181, 1432, 1494
Tru1I TTAA 6 cut(s) 120, 336, 944, 1073, 1362, 1512
Tru9I TTAA 6 cut(s) 120, 336, 944, 1073, 1362, 1512
TscAI CASTG 2 cut(s) 567, 1200
TseFI GTSAC 4 cut(s) 541, 562, 752, 1260
TseI GCWGC 3 cut(s) 224, 319, 959
Tsp45I GTSAC 4 cut(s) 541, 562, 752, 1260
TspDTI ATGAA 3 cut(s) 49, 490, 1041
TspGWI ACGGA 1 cut(s) 203
TspRI CASTG 2 cut(s) 567, 1200
Tth111I GACNNNGTC 1 cut(s) 194
VneI GTGCAC 1 cut(s) 1032
VpaK11BI GGWCC 1 cut(s) 1337
XbaI TCTAGA 1 cut(s) 1585
XceI RCATGY 5 cut(s) 269, 782, 1006, 1299, 1459
XcmI CCANNNNNNNNNTGG 3 cut(s) 17, 395, 1225
XmnI GAANNNNTTC 1 cut(s) 1524
XspI CTAG 2 cut(s) 1470, 1586
ZrmI AGTACT 2 cut(s) 76, 902
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.