Rmu_sc0009831.1_g000003

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009831.1
OG0000108
Physical Location & Seq
Reverse (-)
12278 .. 14295
2018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009831.1_g000003.1.cds

Sequence Viewer

Length: 1305 bp
atggccaactatttgaagactgtggtggctcctcaggtatgcatctatagtttgcttggttcccccaccgctcaacaatatctatttgtggctgcagactgtgcaaacgagtcaattgatgctcagaaggtctttggttatgctctttacaaagatggcaaggatacaaaactatcttatccgttggagcagtatagttcagatgtggctgggagaagtttccacaatgggcgttttattcaaagaatgcgtgaaaaagctgcaattctttcaaatgtcaaattggaacaaggatcggtgacaacactaattgaggaaaagggcattgtcaaaggggtgatttacaagaacaaggctggagaggagatgagaacgtatgctccactaacaatcgtctgtgatggctgcttttcaaatctgcgtaaatctctcagtgctccaaaggttgaaagtccctcttgttttgttggtttggtgttagagaactgtgatcttccacatgcaaatcatggacatgtgattttgggagacccttcacccatcctgttttatcctattagttccactgagattcgttgtttggtcgatgtacctgggacaaaagtaccttcagttgctagtggtgaaatggccaactatttgaagactgtggtggctcctcaggttcccccaccgctctacaatgcttttatggttgcagtagagaaaggaaacattagatccatgcaaaacaaaagcatggctgctaatcctgttcccactcctggtgcaattttgctgggggattcattcaacatgaggcatcctttaacaggaggaggaatgactgtggctctttcagacatagttcttctccgcgatcttcttagacccctacgtgatcttaatgatgcacctgctttgtgcaattaccttgaatcattttatacattgccctgtgtcatctactataaacacatttacaacgtgttttgtgcatcgcctgatccagcaagacaggaaatgcgtgaagcatgttttggctatttgagccttggaggaatctgttcatatggaccaatatctctgctctctggccttaaccctcgtccgctgcacttgttccttcatttctttgctgttgctatctacggtgttgggcgcttaatgcttccattcccttcaccacaacgcatgtggcttgggttcagattgatcttgagtgcatcaggcatcatattccccattataaagggagaaggagttagacagatgttctttccagcaacggtgccagcatattatagatcaccacctgttcattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

434

Amino Acids

47.63

Weight (kDa)

8.71

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1229
AarI CACCTGC 1 cut(s) 904
Acc36I ACCTGC 1 cut(s) 904
AccB1I GGYRCC 1 cut(s) 1270
AccBSI CCGCTC 2 cut(s) 71, 676
AccII CGCG 1 cut(s) 858
AciI CCGC 4 cut(s) 69, 674, 856, 1091
AclWI GGATC 3 cut(s) 301, 714, 980
AcoI YGGCCR 2 cut(s) 3, 630
AcuI CTGAAG 1 cut(s) 594
AfaI GTAC 2 cut(s) 591, 606
AfiI CCNNNNNNNGG 2 cut(s) 764, 812
AflIII ACRYGT 2 cut(s) 514, 966
AgsI TTSAA 8 cut(s) 16, 242, 273, 414, 449, 643, 793, 917
AjnI CCWGG 2 cut(s) 592, 763
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
AloI GAACNNNNNNTCC 2 cut(s) 364, 396
AluBI AGCT 1 cut(s) 260
AluI AGCT 1 cut(s) 260
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 1 cut(s) 522
AlwI GGATC 3 cut(s) 301, 714, 980
AoxI GGCC 3 cut(s) 3, 630, 1075
ApeKI GCWGC 5 cut(s) 92, 260, 405, 743, 1093
Asp700I GAANNNNTTC 1 cut(s) 1045
AspLEI GCGC 1 cut(s) 1143
AspS9I GGNCC 1 cut(s) 1055
AsuHPI GGTGA 6 cut(s) 310, 349, 528, 635, 1155, 1281
AvaII GGWCC 1 cut(s) 1055
AxyI CCTNAGG 2 cut(s) 33, 660
BaeI ACNNNNGTAYC 2 cut(s) 588, 621
BalI TGGCCA 2 cut(s) 5, 632
BanI GGYRCC 1 cut(s) 1270
BbsI GAAGAC 2 cut(s) 23, 650
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 5 cut(s) 79, 247, 392, 730, 1080
BccI CCATC 3 cut(s) 149, 395, 548
BciT130I CCWGG 2 cut(s) 594, 765
BciVI GTATCC 1 cut(s) 157
BcoDI GTCTC 1 cut(s) 522
BfaI CTAG 1 cut(s) 618
BfmI CTRYAG 2 cut(s) 46, 93
BfoI RGCGCY 1 cut(s) 1144
BfuAI ACCTGC 1 cut(s) 904
BfuI GTATCC 1 cut(s) 157
BisI GCNGC 5 cut(s) 93, 261, 406, 744, 1094
BlsI GCNGC 5 cut(s) 94, 262, 407, 745, 1095
Bme1390I CCNGG 2 cut(s) 594, 765
Bme18I GGWCC 1 cut(s) 1055
BmgT120I GGNCC 1 cut(s) 1055
BmiI GGNNCC 5 cut(s) 30, 61, 657, 666, 1272
BmrFI CCNGG 2 cut(s) 594, 765
BmsI GCATC 7 cut(s) 51, 109, 811, 880, 986, 1214, 1221
BpiI GAAGAC 2 cut(s) 23, 650
BpmI CTGGAG 1 cut(s) 378
BpuEI CTTGAG 1 cut(s) 1219
BsaAI YACGTR 1 cut(s) 878
BsaI GGTCTC 1 cut(s) 522
BsaJI CCNNGG 2 cut(s) 593, 1033
BsaXI ACNNNNNCTCC 4 cut(s) 364, 394, 1227, 1257
Bsc4I CCNNNNNNNGG 2 cut(s) 764, 812
Bse21I CCTNAGG 2 cut(s) 33, 660
Bse3DI GCAATG 1 cut(s) 929
BseBI CCWGG 2 cut(s) 594, 765
BseDI CCNNGG 2 cut(s) 593, 1033
BseGI GGATG 2 cut(s) 540, 802
BseLI CCNNNNNNNGG 2 cut(s) 764, 812
BseMI GCAATG 1 cut(s) 929
BseMII CTCAG 5 cut(s) 47, 137, 445, 558, 674
BseRI GAGGAG 4 cut(s) 21, 377, 648, 831
BseXI GCAGC 5 cut(s) 79, 247, 392, 730, 1080
BseYI CCCAGC 2 cut(s) 209, 778
BsgI GTGCAG 1 cut(s) 1079
Bsh1236I CGCG 1 cut(s) 858
BshFI GGCC 3 cut(s) 5, 632, 1077
BshNI GGYRCC 1 cut(s) 1270
BsiHKAI GWGCWC 1 cut(s) 439
BslFI GGGAC 2 cut(s) 438, 610
BslI CCNNNNNNNGG 2 cut(s) 764, 812
BsmAI GTCTC 1 cut(s) 522
BsmFI GGGAC 2 cut(s) 438, 610
BsmI GAATGC 1 cut(s) 252
BsnI GGCC 3 cut(s) 5, 632, 1077
Bso31I GGTCTC 1 cut(s) 522
Bsp1286I GDGCHC 1 cut(s) 439
Bsp143I GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
BspACI CCGC 4 cut(s) 69, 674, 856, 1091
BspANI GGCC 3 cut(s) 5, 632, 1077
BspCNI CTCAG 5 cut(s) 46, 136, 444, 559, 673
BspFNI CGCG 1 cut(s) 858
BspLI GGNNCC 5 cut(s) 30, 61, 657, 666, 1272
BspMAI CTGCAG 1 cut(s) 97
BspMI ACCTGC 1 cut(s) 904
BspPI GGATC 3 cut(s) 301, 714, 980
BspT107I GGYRCC 1 cut(s) 1270
BspTNI GGTCTC 1 cut(s) 522
BsrBI CCGCTC 2 cut(s) 71, 676
BsrDI GCAATG 1 cut(s) 929
BssECI CCNNGG 2 cut(s) 593, 1033
BssMI GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
BssT1I CCWWGG 1 cut(s) 1033
Bst2UI CCWGG 2 cut(s) 594, 765
Bst4CI ACNGT 7 cut(s) 22, 101, 488, 649, 829, 1133, 1270
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBAI YACGTR 1 cut(s) 878
BstC8I GCNNGC 1 cut(s) 1275
BstDEI CTNAG 6 cut(s) 33, 123, 431, 567, 660, 866
BstENI CCTNNNNNAGG 1 cut(s) 810
BstF5I GGATG 2 cut(s) 540, 802
BstFNI CGCG 1 cut(s) 858
BstH2I RGCGCY 1 cut(s) 1144
BstHHI GCGC 1 cut(s) 1143
BstKTI GATC 8 cut(s) 296, 493, 722, 862, 883, 988, 1197, 1289
BstMAI GTCTC 1 cut(s) 522
BstMBI GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
BstMWI GCNNNNNNNGC 3 cut(s) 101, 1029, 1147
BstNI CCWGG 2 cut(s) 594, 765
BstNSI RCATGY 4 cut(s) 503, 518, 1017, 1177
BstSCI CCNGG 2 cut(s) 592, 763
BstSFI CTRYAG 2 cut(s) 46, 93
BstUI CGCG 1 cut(s) 858
BstV1I GCAGC 5 cut(s) 79, 247, 392, 730, 1080
BstV2I GAAGAC 2 cut(s) 23, 650
BstX2I RGATCY 1 cut(s) 719
BstYI RGATCY 1 cut(s) 719
Bsu36I CCTNAGG 2 cut(s) 33, 660
BsuI GTATCC 1 cut(s) 157
BsuRI GGCC 3 cut(s) 5, 632, 1077
BtgZI GCGATG 1 cut(s) 963
BtsCI GGATG 2 cut(s) 540, 802
BtsIMutI CAGTG 2 cut(s) 439, 564
BveI ACCTGC 1 cut(s) 904
Cac8I GCNNGC 1 cut(s) 1275
CfoI GCGC 1 cut(s) 1143
Cfr13I GGNCC 1 cut(s) 1055
Csp6I GTAC 2 cut(s) 590, 605
CspCI CAANNNNNGTGG 2 cut(s) 1157, 1192
CviAII CATG 8 cut(s) 500, 509, 515, 724, 739, 796, 1014, 1174
CviQI GTAC 2 cut(s) 590, 605
DdeI CTNAG 6 cut(s) 33, 123, 431, 567, 660, 866
DpnI GATC 8 cut(s) 295, 492, 721, 861, 882, 987, 1196, 1288
DpnII GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
EaeI YGGCCR 2 cut(s) 3, 630
Eco130I CCWWGG 1 cut(s) 1033
Eco31I GGTCTC 1 cut(s) 522
Eco47I GGWCC 1 cut(s) 1055
Eco57I CTGAAG 1 cut(s) 594
Eco81I CCTNAGG 2 cut(s) 33, 660
EcoNI CCTNNNNNAGG 1 cut(s) 810
EcoRII CCWGG 2 cut(s) 592, 763
EcoT14I CCWWGG 1 cut(s) 1033
EcoT22I ATGCAT 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 1033
FaeI CATG 8 cut(s) 503, 512, 518, 727, 742, 799, 1017, 1177
FalI AAGNNNNNCTT 2 cut(s) 442, 474
FaqI GGGAC 2 cut(s) 438, 610
FatI CATG 8 cut(s) 499, 508, 514, 723, 738, 795, 1013, 1173
FauNDI CATATG 1 cut(s) 1051
Fnu4HI GCNGC 5 cut(s) 93, 261, 406, 744, 1094
FokI GGATG 2 cut(s) 527, 789
Fsp4HI GCNGC 5 cut(s) 93, 261, 406, 744, 1094
FspBI CTAG 1 cut(s) 618
GlaI GCGC 1 cut(s) 1142
GluI GCNGC 5 cut(s) 93, 261, 406, 744, 1094
GsaI CCCAGC 2 cut(s) 213, 782
GsuI CTGGAG 1 cut(s) 378
HaeII RGCGCY 1 cut(s) 1144
HaeIII GGCC 3 cut(s) 5, 632, 1077
HhaI GCGC 1 cut(s) 1143
Hin1II CATG 8 cut(s) 503, 512, 518, 727, 742, 799, 1017, 1177
Hin6I GCGC 1 cut(s) 1141
HinP1I GCGC 1 cut(s) 1141
HinfI GANTC 5 cut(s) 110, 571, 785, 917, 1041
HphI GGTGA 6 cut(s) 310, 349, 528, 635, 1155, 1281
Hpy188I TCNGA 4 cut(s) 126, 202, 841, 1190
Hpy188III TCNNGA 1 cut(s) 1198
HpyAV CCTTC 6 cut(s) 121, 543, 618, 1115, 1170, 1232
HpyCH4III ACNGT 7 cut(s) 22, 101, 488, 649, 829, 1133, 1270
HpyCH4IV ACGT 3 cut(s) 374, 877, 966
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 1029, 1147
HpyF3I CTNAG 6 cut(s) 33, 123, 431, 567, 660, 866
HpySE526I ACGT 3 cut(s) 374, 877, 966
Hsp92II CATG 8 cut(s) 503, 512, 518, 727, 742, 799, 1017, 1177
HspAI GCGC 1 cut(s) 1141
Kzo9I GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
LmnI GCTCC 5 cut(s) 34, 187, 385, 442, 661
Lsp1109I GCAGC 5 cut(s) 79, 247, 392, 730, 1080
LweI GCATC 7 cut(s) 51, 109, 811, 880, 986, 1214, 1221
MaeI CTAG 1 cut(s) 618
MaeII ACGT 3 cut(s) 374, 877, 966
MaeIII GTNAC 1 cut(s) 298
MalI GATC 8 cut(s) 295, 492, 721, 861, 882, 987, 1196, 1288
MbiI CCGCTC 2 cut(s) 71, 676
MboI GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
MboII GAAGA 5 cut(s) 28, 485, 655, 842, 854
MfeI CAATTG 1 cut(s) 114
MflI RGATCY 1 cut(s) 719
MhlI GDGCHC 1 cut(s) 439
MlsI TGGCCA 2 cut(s) 5, 632
MluCI AATT 6 cut(s) 114, 264, 281, 309, 771, 907
MluNI TGGCCA 2 cut(s) 5, 632
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 1 cut(s) 165
Mox20I TGGCCA 2 cut(s) 5, 632
Mph1103I ATGCAT 1 cut(s) 44
MroXI GAANNNNTTC 1 cut(s) 1045
MscI TGGCCA 2 cut(s) 5, 632
MseI TTAA 4 cut(s) 809, 885, 1080, 1145
MslI CAYNNNNRTG 1 cut(s) 513
Msp20I TGGCCA 2 cut(s) 5, 632
MspA1I CMGCKG 1 cut(s) 1093
MspR9I CCNGG 2 cut(s) 594, 765
MunI CAATTG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 252
MvaI CCWGG 2 cut(s) 594, 765
MvnI CGCG 1 cut(s) 858
MwoI GCNNNNNNNGC 3 cut(s) 101, 1029, 1147
NdeI CATATG 1 cut(s) 1051
NdeII GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
NlaIII CATG 8 cut(s) 503, 512, 518, 727, 742, 799, 1017, 1177
NlaIV GGNNCC 5 cut(s) 30, 61, 657, 666, 1272
NmuCI GTSAC 1 cut(s) 298
NsiI ATGCAT 1 cut(s) 44
NspI RCATGY 4 cut(s) 503, 518, 1017, 1177
PaqCI CACCTGC 1 cut(s) 904
PciI ACATGT 1 cut(s) 514
PctI GAATGC 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 1045
PfeI GAWTC 4 cut(s) 571, 785, 917, 1041
PkrI GCNGC 5 cut(s) 94, 262, 407, 745, 1095
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
Ppu21I YACGTR 1 cut(s) 878
PscI ACATGT 1 cut(s) 514
PsiI TTATAA 1 cut(s) 1229
Psp6I CCWGG 2 cut(s) 592, 763
PspFI CCCAGC 2 cut(s) 209, 778
PspGI CCWGG 2 cut(s) 592, 763
PspN4I GGNNCC 5 cut(s) 30, 61, 657, 666, 1272
PspPI GGNCC 1 cut(s) 1055
PstI CTGCAG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 719
RsaI GTAC 2 cut(s) 591, 606
RsaNI GTAC 2 cut(s) 590, 605
RseI CAYNNNNRTG 1 cut(s) 513
SaqAI TTAA 4 cut(s) 809, 885, 1080, 1145
SatI GCNGC 5 cut(s) 93, 261, 406, 744, 1094
Sau3AI GATC 8 cut(s) 293, 490, 719, 859, 880, 985, 1194, 1286
Sau96I GGNCC 1 cut(s) 1055
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 2 cut(s) 594, 765
SduI GDGCHC 1 cut(s) 439
SfaNI GCATC 7 cut(s) 51, 109, 811, 880, 986, 1214, 1221
SfcI CTRYAG 2 cut(s) 46, 93
SinI GGWCC 1 cut(s) 1055
SmiMI CAYNNNNRTG 1 cut(s) 513
SmlI CTYRAG 1 cut(s) 1198
SmoI CTYRAG 1 cut(s) 1198
Sse9I AATT 6 cut(s) 114, 264, 281, 309, 771, 907
SsiI CCGC 4 cut(s) 69, 674, 856, 1091
SspMI CTAG 1 cut(s) 618
StyD4I CCNGG 2 cut(s) 592, 763
StyI CCWWGG 1 cut(s) 1033
TaaI ACNGT 7 cut(s) 22, 101, 488, 649, 829, 1133, 1270
TaiI ACGT 3 cut(s) 377, 880, 969
TaqI TCGA 1 cut(s) 585
TasI AATT 6 cut(s) 114, 264, 281, 309, 771, 907
TfiI GAWTC 4 cut(s) 571, 785, 917, 1041
Tru1I TTAA 4 cut(s) 809, 885, 1080, 1145
Tru9I TTAA 4 cut(s) 809, 885, 1080, 1145
TscAI CASTG 2 cut(s) 439, 571
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 5 cut(s) 92, 260, 405, 743, 1093
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 4 cut(s) 777, 1038, 1097, 1289
TspGWI ACGGA 1 cut(s) 171
TspRI CASTG 2 cut(s) 439, 571
VpaK11BI GGWCC 1 cut(s) 1055
XagI CCTNNNNNAGG 1 cut(s) 810
XceI RCATGY 4 cut(s) 503, 518, 1017, 1177
XcmI CCANNNNNNNNNTGG 1 cut(s) 1173
XmnI GAANNNNTTC 1 cut(s) 1045
XspI CTAG 1 cut(s) 618
Zsp2I ATGCAT 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.