RchiOBHm_Chr6g0246961

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000108
Physical Location & Seq
Forward (+)
2671541 .. 2674755
3215 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22137

Sequence Viewer

Length: 1014 bp
ATGATCATCAGCTCTACTTTGGGAGGAAAGAAACAATTCAAGGCTTCAGGTGGGGTAAAGAGTAATGGATTCGGAAACGGTGAGTTTCTGCCGGAAATGGAGGAGGAGAAAAGTACCGATGTTGTCATTGTCGGCGCCGGAGTTGCTGGTGCAGCTCTTGCTTACACTCTTGCCAAGGAAGGACGGCGTGTACATGTAATTGAAAGAGACTTGAGTGAGCCAGATAGAATCGTTGGGGAGCTGTTGCAGCCAGGGGGATATCTCAAATTGATTGAGTTGGGTCTTGAAGTACTGTCTTATCCCTTGGAGAAATACAGTTCAGATGTGGCCGGGAGGAGTTTCCACAATGGGCGTTTCATTCAAAGAATGCGTGAAAAAGATACAACTCTTTCAAATGTGAAAATGGAACAAGGATCAGTGACAACACTAATAGAGGAAAAGGGCATTATTAAAGGGGTGATTTACAAGAACAAGACTGGAGAGGAGATGAGAACATATGCTCCTCTAACAATCGTGTGCGATGGCTATTTTTCAAATTTGTGCAAATCTCTTAGTGCTCCAAAGGTTGAAAGTCCATCTTGTTTTGTTGGTTTGATCTTGGAGGACTGTGAGCTTCATGGGCATGTCATTCTGGGAGACCCTTCACCAATCCTGTTTTATCCCATCAGTTCCACTGAGGTTCGCTATTTGGTAGATGTGCCTGGAACAAAAGTTCCCTCACAACTGTACAATGCTTTTATGGTTGCAGTGGAGAAAGGAAATATTAGATCCATCCAAAATAAAAGCATGGCTGCTAATCCTGTTCCCACTCCTGGTGCAATTTTGTTGGGGGATTCATTCAACATGAGGCATCCTTTAACAGGAAGAGGAATGACCGTGGCACTTTCAGACATTGTTCTTCTCCGAGATCTTCTTAAGGGTCTACGTAATCTCAACGATGCACCTGCTTTGAGCAATTACCTTGAATCATTTTACACACTGTGTAAGGTAAAGCCACATTCGTATAACTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

337

Amino Acids

36.75

Weight (kDa)

7.01

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thi4 PF01946 33 - 72 7.4e-06 Thi4 family
DAO PF01266 40 - 70 2.6e-08 FAD dependent oxidoreductase
FAD_binding_2 PF00890 40 - 69 5.9e-06 FAD binding domain
NAD_binding_8 PF13450 43 - 69 1.2e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 167 - 241 6.5e-24 Squalene epoxidase
SE PF08491 237 - 329 5e-31 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 952
Acc36I ACCTGC 1 cut(s) 952
AccB1I GGYRCC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 922
AclWI GGATC 2 cut(s) 421, 762
AcoI YGGCCR 1 cut(s) 327
AcsI RAATTY 1 cut(s) 535
AcuI CTGAAG 1 cut(s) 30
AcyI GRCGYC 1 cut(s) 135
AdeI CACNNNGTG 1 cut(s) 981
AfaI GTAC 4 cut(s) 115, 192, 291, 728
AfiI CCNNNNNNNGG 2 cut(s) 812, 860
AflII CTTAAG 1 cut(s) 914
AflIII ACRYGT 1 cut(s) 193
AgsI TTSAA 9 cut(s) 40, 203, 287, 362, 393, 534, 569, 841, 965
AjnI CCWGG 3 cut(s) 250, 700, 811
AloI GAACNNNNNNTCC 6 cut(s) 484, 516, 696, 697, 728, 729
AluBI AGCT 4 cut(s) 12, 155, 241, 613
AluI AGCT 4 cut(s) 12, 155, 241, 613
Alw21I GWGCWC 1 cut(s) 559
Alw26I GTCTC 2 cut(s) 201, 630
AlwI GGATC 2 cut(s) 421, 762
AoxI GGCC 1 cut(s) 327
ApeKI GCWGC 3 cut(s) 152, 247, 791
ApoI RAATTY 1 cut(s) 535
Asp700I GAANNNNTTC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 137
AsuC2I CCSGG 1 cut(s) 331
AsuHPI GGTGA 3 cut(s) 92, 469, 636
BanI GGYRCC 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 559
BbvI GCAGC 3 cut(s) 164, 259, 778
BccI CCATC 4 cut(s) 515, 583, 671, 779
BceAI ACGGC 1 cut(s) 200
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciT130I CCWGG 3 cut(s) 252, 702, 813
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 331
BcoDI GTCTC 2 cut(s) 201, 630
BfoI RGCGCY 1 cut(s) 138
BfrI CTTAAG 1 cut(s) 914
BfuAI ACCTGC 1 cut(s) 952
BglII AGATCT 1 cut(s) 907
BisI GCNGC 3 cut(s) 153, 248, 792
BlsI GCNGC 3 cut(s) 154, 249, 793
BmcAI AGTACT 1 cut(s) 291
Bme1390I CCNGG 4 cut(s) 252, 331, 702, 813
BmiI GGNNCC 1 cut(s) 136
BmrFI CCNGG 4 cut(s) 252, 331, 702, 813
BmsI GCATC 2 cut(s) 859, 928
BpmI CTGGAG 1 cut(s) 498
BpuEI CTTGAG 1 cut(s) 232
BpuMI CCSGG 1 cut(s) 331
BsaAI YACGTR 1 cut(s) 926
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 1 cut(s) 630
BsaJI CCNNGG 4 cut(s) 174, 251, 303, 876
BsaXI ACNNNNNCTCC 2 cut(s) 484, 514
Bsc4I CCNNNNNNNGG 2 cut(s) 812, 860
Bse1I ACTGG 1 cut(s) 481
BseBI CCWGG 3 cut(s) 252, 702, 813
BseDI CCNNGG 4 cut(s) 174, 251, 303, 876
BseGI GGATG 2 cut(s) 771, 850
BseLI CCNNNNNNNGG 2 cut(s) 812, 860
BseMII CTCAG 1 cut(s) 666
BseNI ACTGG 1 cut(s) 481
BseRI GAGGAG 5 cut(s) 116, 119, 349, 492, 497
BseXI GCAGC 3 cut(s) 164, 259, 778
BsgI GTGCAG 1 cut(s) 171
BshFI GGCC 1 cut(s) 329
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 559
BsiSI CCGG 3 cut(s) 92, 138, 330
BslI CCNNNNNNNGG 2 cut(s) 812, 860
BsmAI GTCTC 2 cut(s) 201, 630
BsmI GAATGC 1 cut(s) 372
BsnI GGCC 1 cut(s) 329
Bso31I GGTCTC 1 cut(s) 630
Bsp1286I GDGCHC 1 cut(s) 559
Bsp1407I TGTACA 2 cut(s) 190, 726
Bsp143I GATC 5 cut(s) 3, 413, 594, 767, 907
BspANI GGCC 1 cut(s) 329
BspCNI CTCAG 1 cut(s) 667
BspLI GGNNCC 1 cut(s) 136
BspMI ACCTGC 1 cut(s) 952
BspPI GGATC 2 cut(s) 421, 762
BspT107I GGYRCC 1 cut(s) 134
BspTI CTTAAG 1 cut(s) 914
BspTNI GGTCTC 1 cut(s) 630
BsrGI TGTACA 2 cut(s) 190, 726
BsrI ACTGG 1 cut(s) 481
BssECI CCNNGG 4 cut(s) 174, 251, 303, 876
BssMI GATC 5 cut(s) 3, 413, 594, 767, 907
BssNI GRCGYC 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 174, 303
Bst2UI CCWGG 3 cut(s) 252, 702, 813
Bst4CI ACNGT 7 cut(s) 80, 294, 317, 608, 726, 877, 981
Bst6I CTCTTC 1 cut(s) 859
BstACI GRCGYC 1 cut(s) 135
BstAFI CTTAAG 1 cut(s) 914
BstAPI GCANNNNNTGC 1 cut(s) 158
BstAUI TGTACA 2 cut(s) 190, 726
BstBAI YACGTR 1 cut(s) 926
BstDEI CTNAG 2 cut(s) 551, 675
BstDSI CCRYGG 1 cut(s) 876
BstENI CCTNNNNNAGG 1 cut(s) 858
BstF5I GGATG 2 cut(s) 771, 850
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 5 cut(s) 6, 416, 597, 770, 910
BstMAI GTCTC 2 cut(s) 201, 630
BstMBI GATC 5 cut(s) 3, 413, 594, 767, 907
BstMWI GCNNNNNNNGC 5 cut(s) 143, 152, 158, 247, 619
BstNI CCWGG 3 cut(s) 252, 702, 813
BstNSI RCATGY 2 cut(s) 197, 626
BstSCI CCNGG 4 cut(s) 250, 329, 700, 811
BstSNI TACGTA 1 cut(s) 926
BstV1I GCAGC 3 cut(s) 164, 259, 778
BstX2I RGATCY 2 cut(s) 767, 907
BstYI RGATCY 2 cut(s) 767, 907
BsuRI GGCC 1 cut(s) 329
BtgI CCRYGG 1 cut(s) 876
BtgZI GCGATG 1 cut(s) 534
BtsCI GGATG 2 cut(s) 771, 850
BtsI GCAGTG 1 cut(s) 753
BtsIMutI CAGTG 4 cut(s) 423, 672, 753, 977
BveI ACCTGC 1 cut(s) 952
CfoI GCGC 1 cut(s) 137
Csp6I GTAC 4 cut(s) 114, 191, 290, 727
CviAII CATG 5 cut(s) 194, 617, 623, 787, 844
CviQI GTAC 4 cut(s) 114, 191, 290, 727
DdeI CTNAG 2 cut(s) 551, 675
DinI GGCGCC 1 cut(s) 136
DpnI GATC 5 cut(s) 5, 415, 596, 769, 909
DpnII GATC 5 cut(s) 3, 413, 594, 767, 907
DraIII CACNNNGTG 1 cut(s) 981
EaeI YGGCCR 1 cut(s) 327
Eam1104I CTCTTC 1 cut(s) 859
EarI CTCTTC 1 cut(s) 859
Eco105I TACGTA 1 cut(s) 926
Eco130I CCWWGG 2 cut(s) 174, 303
Eco31I GGTCTC 1 cut(s) 630
Eco32I GATATC 1 cut(s) 260
Eco57I CTGAAG 1 cut(s) 30
EcoNI CCTNNNNNAGG 1 cut(s) 858
EcoRII CCWGG 3 cut(s) 250, 700, 811
EcoRV GATATC 1 cut(s) 260
EcoT14I CCWWGG 2 cut(s) 174, 303
EgeI GGCGCC 1 cut(s) 136
EheI GGCGCC 1 cut(s) 136
ErhI CCWWGG 2 cut(s) 174, 303
FaeI CATG 5 cut(s) 197, 620, 626, 790, 847
FalI AAGNNNNNCTT 2 cut(s) 562, 594
FatI CATG 5 cut(s) 193, 616, 622, 786, 843
FauNDI CATATG 1 cut(s) 496
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 922
Fnu4HI GCNGC 3 cut(s) 153, 248, 792
FokI GGATG 2 cut(s) 758, 837
Fsp4HI GCNGC 3 cut(s) 153, 248, 792
GlaI GCGC 1 cut(s) 136
GluI GCNGC 3 cut(s) 153, 248, 792
GsuI CTGGAG 1 cut(s) 498
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 1 cut(s) 329
HapII CCGG 3 cut(s) 92, 138, 330
HhaI GCGC 1 cut(s) 137
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 5 cut(s) 197, 620, 626, 790, 847
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HinfI GANTC 4 cut(s) 69, 228, 833, 965
HpaII CCGG 3 cut(s) 92, 138, 330
HphI GGTGA 3 cut(s) 92, 469, 636
Hpy166II GTNNAC 2 cut(s) 191, 923
Hpy188I TCNGA 4 cut(s) 74, 322, 889, 905
Hpy188III TCNNGA 1 cut(s) 284
Hpy8I GTNNAC 2 cut(s) 191, 923
HpyAV CCTTC 2 cut(s) 173, 651
HpyCH4III ACNGT 7 cut(s) 80, 294, 317, 608, 726, 877, 981
HpyCH4IV ACGT 1 cut(s) 925
HpyCH4V TGCA 6 cut(s) 152, 247, 543, 746, 818, 941
HpyF10VI GCNNNNNNNGC 5 cut(s) 143, 152, 158, 247, 619
HpyF3I CTNAG 2 cut(s) 551, 675
HpySE526I ACGT 1 cut(s) 925
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 5 cut(s) 197, 620, 626, 790, 847
HspAI GCGC 1 cut(s) 135
KasI GGCGCC 1 cut(s) 134
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 5 cut(s) 3, 413, 594, 767, 907
LmnI GCTCC 3 cut(s) 238, 505, 562
Lsp1109I GCAGC 3 cut(s) 164, 259, 778
LweI GCATC 2 cut(s) 859, 928
MaeII ACGT 1 cut(s) 925
MaeIII GTNAC 1 cut(s) 418
MalI GATC 5 cut(s) 5, 415, 596, 769, 909
MboI GATC 5 cut(s) 3, 413, 594, 767, 907
MboII GAAGA 3 cut(s) 876, 890, 902
MflI RGATCY 2 cut(s) 767, 907
MhlI GDGCHC 1 cut(s) 559
MluCI AATT 6 cut(s) 35, 198, 266, 535, 819, 955
Mly113I GGCGCC 1 cut(s) 135
MroXI GAANNNNTTC 1 cut(s) 35
MseI TTAA 3 cut(s) 450, 857, 915
MslI CAYNNNNRTG 1 cut(s) 621
MspCI CTTAAG 1 cut(s) 914
MspI CCGG 3 cut(s) 92, 138, 330
MspR9I CCNGG 4 cut(s) 252, 331, 702, 813
Mva1269I GAATGC 1 cut(s) 372
MvaI CCWGG 3 cut(s) 252, 702, 813
MwoI GCNNNNNNNGC 5 cut(s) 143, 152, 158, 247, 619
NarI GGCGCC 1 cut(s) 135
NciI CCSGG 1 cut(s) 331
NdeI CATATG 1 cut(s) 496
NdeII GATC 5 cut(s) 3, 413, 594, 767, 907
NlaIII CATG 5 cut(s) 197, 620, 626, 790, 847
NlaIV GGNNCC 1 cut(s) 136
NmuCI GTSAC 1 cut(s) 418
NspI RCATGY 2 cut(s) 197, 626
PaqCI CACCTGC 1 cut(s) 952
PciI ACATGT 1 cut(s) 193
PctI GAATGC 1 cut(s) 372
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 4 cut(s) 69, 228, 833, 965
PkrI GCNGC 3 cut(s) 154, 249, 793
PluTI GGCGCC 1 cut(s) 138
Ppu21I YACGTR 1 cut(s) 926
PscI ACATGT 1 cut(s) 193
Psp6I CCWGG 3 cut(s) 250, 700, 811
PspGI CCWGG 3 cut(s) 250, 700, 811
PspN4I GGNNCC 1 cut(s) 136
PsuI RGATCY 2 cut(s) 767, 907
RsaI GTAC 4 cut(s) 115, 192, 291, 728
RsaNI GTAC 4 cut(s) 114, 191, 290, 727
RseI CAYNNNNRTG 1 cut(s) 621
SaqAI TTAA 3 cut(s) 450, 857, 915
SatI GCNGC 3 cut(s) 153, 248, 792
Sau3AI GATC 5 cut(s) 3, 413, 594, 767, 907
ScaI AGTACT 1 cut(s) 291
ScrFI CCNGG 4 cut(s) 252, 331, 702, 813
SduI GDGCHC 1 cut(s) 559
SfaNI GCATC 2 cut(s) 859, 928
SfoI GGCGCC 1 cut(s) 136
SmiMI CAYNNNNRTG 1 cut(s) 621
SmlI CTYRAG 2 cut(s) 211, 914
SmoI CTYRAG 2 cut(s) 211, 914
SnaBI TACGTA 1 cut(s) 926
Sse9I AATT 6 cut(s) 35, 198, 266, 535, 819, 955
SspDI GGCGCC 1 cut(s) 134
SspI AATATT 1 cut(s) 763
StyD4I CCNGG 4 cut(s) 250, 329, 700, 811
StyI CCWWGG 2 cut(s) 174, 303
TaaI ACNGT 7 cut(s) 80, 294, 317, 608, 726, 877, 981
TaiI ACGT 1 cut(s) 928
TasI AATT 6 cut(s) 35, 198, 266, 535, 819, 955
TatI WGTACW 3 cut(s) 190, 289, 726
TfiI GAWTC 4 cut(s) 69, 228, 833, 965
Tru1I TTAA 3 cut(s) 450, 857, 915
Tru9I TTAA 3 cut(s) 450, 857, 915
TscAI CASTG 4 cut(s) 423, 679, 753, 984
TseFI GTSAC 1 cut(s) 418
TseI GCWGC 3 cut(s) 152, 247, 791
Tsp45I GTSAC 1 cut(s) 418
TspDTI ATGAA 3 cut(s) 346, 605, 825
TspRI CASTG 4 cut(s) 423, 679, 753, 984
Vha464I CTTAAG 1 cut(s) 914
XagI CCTNNNNNAGG 1 cut(s) 858
XapI RAATTY 1 cut(s) 535
XceI RCATGY 2 cut(s) 197, 626
XmiI GTMKAC 1 cut(s) 922
XmnI GAANNNNTTC 1 cut(s) 35
ZrmI AGTACT 1 cut(s) 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.