RchiOBHm_Chr4g0419471

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000108
Physical Location & Seq
Reverse (-)
44882718 .. 44885364
2647 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38937

Sequence Viewer

Length: 1377 bp
ATGATCATCAGCACTACTTTGGGTGGAAAGAAACCATGCAAGGCTTCAAAGGGAGGTGTAAAAAGTAATGATGGGTTTGGGAACAGTGCGTTTCAGCCGGAAATGGAGATGAAAAGTACCGATGTCGTCATTGTCGGTGCCGGATCTGCCGGTGCAGCTTTTGCTTACACTCTTGCCAGGGAAGGTCGTCGTGTACATGTCATCGAAAGAGACTTGACTGAGCCAGACAGAATTGTTGGTGAGCTGTTGCAGCCTGGGGGTTATCTCAAGTTGATTGAGTTGGGTTTCGAGGATTGTGCAAATGAGTCCATTGACGCTCAGAAGGTGTTTGGCTATGCGCTTTACAAAGATGGCAAGGATACCAAACTGACTTATCCCTTGGAGAAATATAATTCAGATGTGGCCGGGAGAAGTTTCCACAATGGGCGTTTCATCCAAAGAATGCGTGAAAAAGCTATGACTCTTTCAAATGTAAAATTGGAACAAGGATCAGTGACAACACTAATAGAGGAAAAGGGCATTGTCAAAGGGGTGATTTACAAGAACAAGGCTGGAGAGGAGATGAGAACATATGCTCCACTAACAATCTTGTGTGATGGCTGCTTTTCAAATCTGCGCAAGTCTCTCAGTGCACCAAAGGTTGAAAGTCCCTCTTGTTTTGTTGGTTTGATCTTGGAGAACTGTGACCTTCCACACTCAAATCATGGACATGTGATTTTGGGAGACCCTTCACCCATACTCTTGTATCCTATCAGTAGCACCGAGGTTCGTTGTCTGGTGGATGTACCTGGAACAAAAGTACCTTCAATAGCTAGTGGTGAAATGGCAAACTATTTGAAAACTGTGGTGGCTCCTCAGATTCCCCCACAACTGCACAATGCTTTTATGGCCGCAGTAGAGAAGGGAAACATCAGAACAATGCAAAACAAAAGCATGGCTGCTAATCCTGTCCCTGCTCCTGGTGCAATTTTATTAGGGGATGCATTCAACATGAGGCATCCTTTAACAGGAGGAGGAATGACCGTTGCTCTTTCAGACATTGTTCTTCTCCGTTATCTTCTTAGACCCATACGTGATCTCCATGATGCACCTGCTTTGTGCAATTACCTTGAATCATTGTACACACAGCGCAAGCCTGTGTCATCTACCATAAACACATTGGCAGGTGCTTTGTACAAGGTGTTTTGTGCATCACCGGATCCAGCAAGACAGGAAATGTGTGAAGCATGTTTTGGCTATTTGAGCTTTGGAGGTATCTGTTCATATGGACCAAGTGCATCAGGCATCATATTCCCCATTATAAAGGGTGAAGGAGTTAGACAGATGTTCTTTCCTGCCACAGTACCAGCATTTTACAGATCTCCTCCTGTTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

458

Amino Acids

49.55

Weight (kDa)

8.48

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thi4 PF01946 31 - 73 3.5e-06 Thi4 family
FAD_binding_3 PF01494 40 - 351 2.5e-18 FAD binding domain
DAO PF01266 41 - 71 5.7e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 44 - 70 6.5e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 192 - 424 6.6e-98 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1301
AarI CACCTGC 2 cut(s) 1099, 1154
Acc16I TGCGCA 1 cut(s) 617
Acc36I ACCTGC 2 cut(s) 1099, 1154
AccB1I GGYRCC 1 cut(s) 137
AciI CCGC 1 cut(s) 891
AclWI GGATC 4 cut(s) 151, 496, 1193, 1206
AcoI YGGCCR 2 cut(s) 402, 888
AfaI GTAC 7 cut(s) 118, 195, 786, 801, 1121, 1175, 1344
AfiI CCNNNNNNNGG 2 cut(s) 959, 1007
AflIII ACRYGT 2 cut(s) 196, 709
AgsI TTSAA 8 cut(s) 48, 468, 609, 644, 807, 838, 988, 1112
AjnI CCWGG 4 cut(s) 176, 253, 787, 958
AjuI GAANNNNNNNTTGG 2 cut(s) 1215, 1247
AloI GAACNNNNNNTCC 2 cut(s) 559, 591
AluBI AGCT 5 cut(s) 158, 244, 455, 812, 1245
AluI AGCT 5 cut(s) 158, 244, 455, 812, 1245
Alw21I GWGCWC 1 cut(s) 634
Alw26I GTCTC 3 cut(s) 204, 627, 717
Alw44I GTGCAC 1 cut(s) 630
AlwI GGATC 4 cut(s) 151, 496, 1193, 1206
AoxI GGCC 2 cut(s) 402, 888
ApaLI GTGCAC 1 cut(s) 630
ApeKI GCWGC 4 cut(s) 155, 250, 600, 938
AspLEI GCGC 3 cut(s) 340, 618, 1131
AspS9I GGNCC 1 cut(s) 1268
AsuC2I CCSGG 1 cut(s) 406
AsuHPI GGTGA 6 cut(s) 251, 544, 723, 830, 1185, 1319
AvaII GGWCC 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 634
BaeI ACNNNNGTAYC 4 cut(s) 728, 761, 783, 816
BamHI GGATCC 1 cut(s) 1198
BanI GGYRCC 1 cut(s) 137
Bbv12I GWGCWC 1 cut(s) 634
BbvI GCAGC 4 cut(s) 167, 262, 587, 925
BccI CCATC 3 cut(s) 65, 344, 590
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 4 cut(s) 178, 255, 789, 960
BciVI GTATCC 2 cut(s) 352, 756
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 406
BcoDI GTCTC 3 cut(s) 204, 627, 717
BfaI CTAG 1 cut(s) 813
BfuAI ACCTGC 2 cut(s) 1099, 1154
BfuI GTATCC 2 cut(s) 352, 756
BglII AGATCT 1 cut(s) 1358
BisI GCNGC 5 cut(s) 156, 251, 601, 891, 939
BlsI GCNGC 5 cut(s) 157, 252, 602, 892, 940
Bme1390I CCNGG 5 cut(s) 178, 255, 406, 789, 960
Bme18I GGWCC 1 cut(s) 1268
BmgT120I GGNCC 1 cut(s) 1268
BmiI GGNNCC 3 cut(s) 139, 852, 1200
BmrFI CCNGG 5 cut(s) 178, 255, 406, 789, 960
BmsI GCATC 6 cut(s) 970, 1006, 1075, 1199, 1286, 1293
BpmI CTGGAG 1 cut(s) 573
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 1 cut(s) 406
BsaAI YACGTR 1 cut(s) 1073
BsaI GGTCTC 1 cut(s) 717
BsaJI CCNNGG 4 cut(s) 177, 254, 378, 762
BsaWI WCCGGW 1 cut(s) 1195
BsaXI ACNNNNNCTCC 4 cut(s) 559, 589, 1062, 1092
Bsc4I CCNNNNNNNGG 2 cut(s) 959, 1007
Bse118I RCCGGY 1 cut(s) 149
BseBI CCWGG 4 cut(s) 178, 255, 789, 960
BseDI CCNNGG 4 cut(s) 177, 254, 378, 762
BseGI GGATG 4 cut(s) 432, 787, 985, 997
BseLI CCNNNNNNNGG 2 cut(s) 959, 1007
BseMII CTCAG 4 cut(s) 210, 332, 640, 869
BseRI GAGGAG 4 cut(s) 572, 843, 1026, 1353
BseSI GKGCMC 1 cut(s) 634
BseXI GCAGC 4 cut(s) 167, 262, 587, 925
BsgI GTGCAG 2 cut(s) 174, 857
BshFI GGCC 2 cut(s) 404, 890
BshNI GGYRCC 1 cut(s) 137
BsiHKAI GWGCWC 1 cut(s) 634
BsiSI CCGG 5 cut(s) 98, 141, 150, 405, 1196
BslFI GGGAC 2 cut(s) 633, 935
BslI CCNNNNNNNGG 2 cut(s) 959, 1007
BsmAI GTCTC 3 cut(s) 204, 627, 717
BsmFI GGGAC 2 cut(s) 633, 935
BsmI GAATGC 2 cut(s) 447, 983
BsnI GGCC 2 cut(s) 404, 890
Bso31I GGTCTC 1 cut(s) 717
Bsp1286I GDGCHC 1 cut(s) 634
Bsp1407I TGTACA 3 cut(s) 193, 1119, 1173
Bsp143I GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
BspACI CCGC 1 cut(s) 891
BspANI GGCC 2 cut(s) 404, 890
BspCNI CTCAG 4 cut(s) 211, 331, 639, 868
BspLI GGNNCC 3 cut(s) 139, 852, 1200
BspMI ACCTGC 2 cut(s) 1099, 1154
BspPI GGATC 4 cut(s) 151, 496, 1193, 1206
BspT107I GGYRCC 1 cut(s) 137
BspTNI GGTCTC 1 cut(s) 717
BsrFI RCCGGY 1 cut(s) 149
BsrGI TGTACA 3 cut(s) 193, 1119, 1173
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 4 cut(s) 177, 254, 378, 762
BssMI GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
BssT1I CCWWGG 1 cut(s) 378
Bst2UI CCWGG 4 cut(s) 178, 255, 789, 960
Bst4CI ACNGT 5 cut(s) 86, 683, 844, 1024, 1342
BstAPI GCANNNNNTGC 1 cut(s) 161
BstAUI TGTACA 3 cut(s) 193, 1119, 1173
BstBAI YACGTR 1 cut(s) 1073
BstC8I GCNNGC 1 cut(s) 1133
BstDEI CTNAG 5 cut(s) 219, 318, 626, 855, 1061
BstENI CCTNNNNNAGG 1 cut(s) 1005
BstF5I GGATG 4 cut(s) 432, 787, 985, 997
BstHHI GCGC 3 cut(s) 340, 618, 1131
BstKTI GATC 7 cut(s) 6, 146, 491, 672, 1078, 1201, 1361
BstMAI GTCTC 3 cut(s) 204, 627, 717
BstMBI GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
BstMWI GCNNNNNNNGC 7 cut(s) 146, 155, 161, 250, 887, 962, 1242
BstNI CCWGG 4 cut(s) 178, 255, 789, 960
BstNSI RCATGY 3 cut(s) 200, 713, 1230
BstSCI CCNGG 5 cut(s) 176, 253, 404, 787, 958
BstSLI GKGCMC 1 cut(s) 634
BstV1I GCAGC 4 cut(s) 167, 262, 587, 925
BstX2I RGATCY 3 cut(s) 143, 1198, 1358
BstYI RGATCY 3 cut(s) 143, 1198, 1358
BsuI GTATCC 2 cut(s) 352, 756
BsuRI GGCC 2 cut(s) 404, 890
BtsCI GGATG 4 cut(s) 432, 787, 985, 997
BtsIMutI CAGTG 3 cut(s) 91, 498, 634
BveI ACCTGC 2 cut(s) 1099, 1154
Cac8I GCNNGC 1 cut(s) 1133
CfoI GCGC 3 cut(s) 340, 618, 1131
Cfr10I RCCGGY 1 cut(s) 149
Cfr13I GGNCC 1 cut(s) 1268
CseI GACGC 1 cut(s) 323
Csp6I GTAC 7 cut(s) 117, 194, 785, 800, 1120, 1174, 1343
CviAII CATG 8 cut(s) 36, 197, 704, 710, 934, 991, 1082, 1227
CviQI GTAC 7 cut(s) 117, 194, 785, 800, 1120, 1174, 1343
DdeI CTNAG 5 cut(s) 219, 318, 626, 855, 1061
DpnI GATC 7 cut(s) 5, 145, 490, 671, 1077, 1200, 1360
DpnII GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
EaeI YGGCCR 2 cut(s) 402, 888
Eco130I CCWWGG 1 cut(s) 378
Eco31I GGTCTC 1 cut(s) 717
Eco47I GGWCC 1 cut(s) 1268
EcoNI CCTNNNNNAGG 1 cut(s) 1005
EcoRII CCWGG 4 cut(s) 176, 253, 787, 958
EcoT14I CCWWGG 1 cut(s) 378
EcoT22I ATGCAT 1 cut(s) 985
ErhI CCWWGG 1 cut(s) 378
FaeI CATG 8 cut(s) 39, 200, 707, 713, 937, 994, 1085, 1230
FalI AAGNNNNNCTT 2 cut(s) 637, 669
FaqI GGGAC 2 cut(s) 633, 935
FatI CATG 8 cut(s) 35, 196, 703, 709, 933, 990, 1081, 1226
FauNDI CATATG 2 cut(s) 571, 1264
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 156, 251, 601, 891, 939
FokI GGATG 4 cut(s) 419, 794, 984, 992
Fsp4HI GCNGC 5 cut(s) 156, 251, 601, 891, 939
FspBI CTAG 1 cut(s) 813
FspI TGCGCA 1 cut(s) 617
GlaI GCGC 3 cut(s) 339, 617, 1130
GluI GCNGC 5 cut(s) 156, 251, 601, 891, 939
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 2 cut(s) 404, 890
HapII CCGG 5 cut(s) 98, 141, 150, 405, 1196
HgaI GACGC 1 cut(s) 323
HhaI GCGC 3 cut(s) 340, 618, 1131
Hin1II CATG 8 cut(s) 39, 200, 707, 713, 937, 994, 1085, 1230
Hin6I GCGC 3 cut(s) 338, 616, 1129
HinP1I GCGC 3 cut(s) 338, 616, 1129
HinfI GANTC 4 cut(s) 305, 460, 859, 1112
HpaII CCGG 5 cut(s) 98, 141, 150, 405, 1196
HphI GGTGA 6 cut(s) 251, 544, 723, 830, 1185, 1319
Hpy166II GTNNAC 3 cut(s) 194, 632, 1122
Hpy188I TCNGA 5 cut(s) 321, 397, 858, 914, 1036
Hpy8I GTNNAC 3 cut(s) 194, 632, 1122
Hpy99I CGWCG 1 cut(s) 192
HpyAV CCTTC 7 cut(s) 176, 316, 698, 738, 813, 895, 1304
HpyCH4III ACNGT 5 cut(s) 86, 683, 844, 1024, 1342
HpyCH4IV ACGT 1 cut(s) 1072
HpyF10VI GCNNNNNNNGC 7 cut(s) 146, 155, 161, 250, 887, 962, 1242
HpyF3I CTNAG 5 cut(s) 219, 318, 626, 855, 1061
HpySE526I ACGT 1 cut(s) 1072
Hsp92II CATG 8 cut(s) 39, 200, 707, 713, 937, 994, 1085, 1230
HspAI GCGC 3 cut(s) 338, 616, 1129
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
LmnI GCTCC 3 cut(s) 580, 856, 961
Lsp1109I GCAGC 4 cut(s) 167, 262, 587, 925
LweI GCATC 6 cut(s) 970, 1006, 1075, 1199, 1286, 1293
MaeI CTAG 1 cut(s) 813
MaeII ACGT 1 cut(s) 1072
MaeIII GTNAC 2 cut(s) 493, 683
MalI GATC 7 cut(s) 5, 145, 490, 671, 1077, 1200, 1360
MboI GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
MboII GAAGA 2 cut(s) 1037, 1049
MflI RGATCY 3 cut(s) 143, 1198, 1358
MhlI GDGCHC 1 cut(s) 634
MluCI AATT 5 cut(s) 231, 391, 476, 966, 1102
MlyI GAGTC 2 cut(s) 314, 454
Mph1103I ATGCAT 1 cut(s) 985
MseI TTAA 1 cut(s) 1004
MslI CAYNNNNRTG 1 cut(s) 708
MspI CCGG 5 cut(s) 98, 141, 150, 405, 1196
MspR9I CCNGG 5 cut(s) 178, 255, 406, 789, 960
Mva1269I GAATGC 2 cut(s) 447, 983
MvaI CCWGG 4 cut(s) 178, 255, 789, 960
MwoI GCNNNNNNNGC 7 cut(s) 146, 155, 161, 250, 887, 962, 1242
NciI CCSGG 1 cut(s) 406
NdeI CATATG 2 cut(s) 571, 1264
NdeII GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
NlaIII CATG 8 cut(s) 39, 200, 707, 713, 937, 994, 1085, 1230
NlaIV GGNNCC 3 cut(s) 139, 852, 1200
NmuCI GTSAC 2 cut(s) 493, 683
NsbI TGCGCA 1 cut(s) 617
NsiI ATGCAT 1 cut(s) 985
NspI RCATGY 3 cut(s) 200, 713, 1230
PaqCI CACCTGC 2 cut(s) 1099, 1154
PciI ACATGT 2 cut(s) 196, 709
PctI GAATGC 2 cut(s) 447, 983
PfeI GAWTC 2 cut(s) 859, 1112
PkrI GCNGC 5 cut(s) 157, 252, 602, 892, 940
PleI GAGTC 2 cut(s) 313, 454
PpsI GAGTC 2 cut(s) 313, 454
Ppu21I YACGTR 1 cut(s) 1073
PscI ACATGT 2 cut(s) 196, 709
PsiI TTATAA 1 cut(s) 1301
Psp6I CCWGG 4 cut(s) 176, 253, 787, 958
PspGI CCWGG 4 cut(s) 176, 253, 787, 958
PspN4I GGNNCC 3 cut(s) 139, 852, 1200
PspPI GGNCC 1 cut(s) 1268
PsuI RGATCY 3 cut(s) 143, 1198, 1358
RsaI GTAC 7 cut(s) 118, 195, 786, 801, 1121, 1175, 1344
RsaNI GTAC 7 cut(s) 117, 194, 785, 800, 1120, 1174, 1343
RseI CAYNNNNRTG 1 cut(s) 708
SaqAI TTAA 1 cut(s) 1004
SatI GCNGC 5 cut(s) 156, 251, 601, 891, 939
Sau3AI GATC 7 cut(s) 3, 143, 488, 669, 1075, 1198, 1358
Sau96I GGNCC 1 cut(s) 1268
SchI GAGTC 2 cut(s) 314, 454
ScrFI CCNGG 5 cut(s) 178, 255, 406, 789, 960
SduI GDGCHC 1 cut(s) 634
SfaNI GCATC 6 cut(s) 970, 1006, 1075, 1199, 1286, 1293
SinI GGWCC 1 cut(s) 1268
SmiMI CAYNNNNRTG 1 cut(s) 708
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
Sse9I AATT 5 cut(s) 231, 391, 476, 966, 1102
SsiI CCGC 1 cut(s) 891
SspMI CTAG 1 cut(s) 813
StyD4I CCNGG 5 cut(s) 176, 253, 404, 787, 958
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 5 cut(s) 86, 683, 844, 1024, 1342
TaiI ACGT 1 cut(s) 1075
TaqI TCGA 2 cut(s) 204, 288
TasI AATT 5 cut(s) 231, 391, 476, 966, 1102
TatI WGTACW 3 cut(s) 193, 1119, 1173
TauI GCSGC 1 cut(s) 893
TfiI GAWTC 2 cut(s) 859, 1112
Tru1I TTAA 1 cut(s) 1004
Tru9I TTAA 1 cut(s) 1004
TscAI CASTG 3 cut(s) 91, 498, 634
TseFI GTSAC 2 cut(s) 493, 683
TseI GCWGC 4 cut(s) 155, 250, 600, 938
Tsp45I GTSAC 2 cut(s) 493, 683
TspDTI ATGAA 4 cut(s) 125, 421, 1251, 1361
TspGWI ACGGA 1 cut(s) 1040
TspRI CASTG 3 cut(s) 91, 498, 634
VneI GTGCAC 1 cut(s) 630
VpaK11BI GGWCC 1 cut(s) 1268
XagI CCTNNNNNAGG 1 cut(s) 1005
XceI RCATGY 3 cut(s) 200, 713, 1230
XcmI CCANNNNNNNNNTGG 1 cut(s) 1156
XspI CTAG 1 cut(s) 813
Zsp2I ATGCAT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.