RLG00000015245

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000108
Physical Location & Seq
Reverse (-)
63541391 .. 63543932
2542 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015245

Sequence Viewer

Length: 1290 bp
ATGGTTTCGTACGAGTATGTTTTGGCTGGGGTGTTAGTTTCTTTGCTGGGCTCTATTTTCTTCATGATCATCAGCTCTACTTTGCTTGGAAAGAAACAATTCAAGGTTTCAGGGGCAGTAAAGAGTAATTGGTCCGGAAACGGTGAGTTTCTGCAGGAAATGGAGGAGGAGAAAAGTACCGTTGTCATCATTGTCGGTGCTGGAGTTGCTGGTGCAGCTCTTGCTTACACTCTTGCCAAGGAAGGACGGCGTGTGCATGTAATTGAAAGAGACTTGAGTGAGCCAGACAGAATTGTTGGGGAGCTGTTGCAGCCTGGGGGATATCTCAAATTGATTGAGTTGGGTCTTGAAGATTGTGCAAATGAGTCGATTGATGCCCAGAAAGTGTTTGGTTATGCTCTTTACAAAGATGGGAAGGATACAACACTGTCTTATCCCTTGGAGAAATACAGTTCAGATGTGGCCGGGAGGAGTTTCCACAATGGGCGTTTCATTCAAAGAATGCGTGAAAAAGCTACCACTCTTTCAAATGTGAAAATGGATCGAACAAGGATCAGTGACAACACTAATAGAGGAAAAGGGCATTGTCAAAGGGATGTGCCTGGAACAAAAGTACCTTCAGTAGCTAGTGGTGAAATGGCAAACTATTTGAAAACTGTGGTAGCGCCTCAGTGGAGAAAGGAAACATCAGATCCATGCAAAATAAAAGCATGGCTCCTAATCCTGTTCCCACTCTCGGTGCCATTTTGTTGGGGGGACTCATTCAACATGAGTCATCCTTTAACAGGAGGAGGAATGACCATAGCTCTTTCAGACATTGTTCTTCTCCGGGATCTTCTTAGACCTCTAAATCTCAATGATGCACCTGCTTTGTGCAATTACCTTGAATCATTTTACACACTGCGTAAGCCTGTGTCATCTACCATAAACACATTGGCAGGTGCATTGTACAAGGTGTTTTGTGCATCACCTGATCCAGCAAGACAGGAAATGCGTGAAGCCTGTTTTGGCTATTTGAGCCTTGGAGGCATCTGCTCATATGGACCAGTATCTCTTCTCTCTGGTCTTAACCCTCGTCCGTTACACTTGTTTCTCCATTTCTTTGCAGTTGCCATCTATGGTGTTGGCCGCTTAATGCTTCCGTTCCCTTCACCTAAACGCATGTGGCTTGGTTTTCGATTGATCTTGAGTGCATCAGGCATCATATTCCCAATTATAAAGGGTGAAGGAATTAGGCAGAGGTTCTTTCCTGCCACAATACCAGCATATTACAGATCTCCTGTTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

430

Amino Acids

47.36

Weight (kDa)

9.17

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 60 - 141 5.8e-06 FAD binding domain
DAO PF01266 62 - 91 4.3e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 64 - 90 1.6e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 252 - 389 3.7e-54 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1217
AarI CACCTGC 2 cut(s) 874, 929
Acc36I ACCTGC 2 cut(s) 874, 929
AccB1I GGYRCC 1 cut(s) 739
AccIII TCCGGA 1 cut(s) 134
AciI CCGC 1 cut(s) 1129
AclWI GGATC 5 cut(s) 549, 560, 686, 840, 968
AcoI YGGCCR 2 cut(s) 462, 1126
AcuI CTGAAG 1 cut(s) 603
AfaI GTAC 4 cut(s) 11, 178, 615, 950
AfiI CCNNNNNNNGG 2 cut(s) 736, 785
AgsI TTSAA 8 cut(s) 103, 266, 350, 497, 528, 652, 766, 887
AjnI CCWGG 2 cut(s) 313, 601
AjuI GAANNNNNNNTTGG 2 cut(s) 990, 1022
AluBI AGCT 6 cut(s) 75, 218, 304, 515, 626, 806
AluI AGCT 6 cut(s) 75, 218, 304, 515, 626, 806
Alw26I GTCTC 1 cut(s) 264
AlwI GGATC 5 cut(s) 549, 560, 686, 840, 968
Aor13HI TCCGGA 1 cut(s) 134
AoxI GGCC 2 cut(s) 462, 1126
ApeKI GCWGC 2 cut(s) 215, 310
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 1 cut(s) 667
AspS9I GGNCC 2 cut(s) 132, 1043
AsuC2I CCSGG 2 cut(s) 466, 830
AsuHPI GGTGA 5 cut(s) 155, 644, 960, 1143, 1235
AvaII GGWCC 2 cut(s) 132, 1043
BaeI ACNNNNGTAYC 2 cut(s) 597, 630
BanI GGYRCC 1 cut(s) 739
BanII GRGCYC 1 cut(s) 53
BbvI GCAGC 2 cut(s) 227, 322
BccI CCATC 2 cut(s) 404, 1121
BceAI ACGGC 1 cut(s) 263
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 2 cut(s) 315, 603
BciVI GTATCC 1 cut(s) 412
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 2 cut(s) 466, 830
BcoDI GTCTC 1 cut(s) 264
BfaI CTAG 1 cut(s) 627
BfmI CTRYAG 1 cut(s) 152
BfoI RGCGCY 1 cut(s) 668
BfuAI ACCTGC 2 cut(s) 874, 929
BfuI GTATCC 1 cut(s) 412
BglI GCCNNNNNGGC 1 cut(s) 1026
BglII AGATCT 1 cut(s) 1274
BisI GCNGC 3 cut(s) 216, 311, 1129
BlsI GCNGC 3 cut(s) 217, 312, 1130
Bme1390I CCNGG 4 cut(s) 315, 466, 603, 830
Bme18I GGWCC 2 cut(s) 132, 1043
BmgT120I GGNCC 2 cut(s) 132, 1043
BmiI GGNNCC 2 cut(s) 716, 741
BmrFI CCNGG 4 cut(s) 315, 466, 603, 830
BmsI GCATC 6 cut(s) 364, 850, 974, 1038, 1202, 1209
BpmI CTGGAG 1 cut(s) 222
BpuEI CTTGAG 2 cut(s) 295, 1207
BpuMI CCSGG 2 cut(s) 466, 830
BsaJI CCNNGG 4 cut(s) 237, 314, 438, 1021
BsaWI WCCGGW 1 cut(s) 134
Bsc4I CCNNNNNNNGG 2 cut(s) 736, 785
Bse1I ACTGG 1 cut(s) 1046
BseAI TCCGGA 1 cut(s) 134
BseBI CCWGG 2 cut(s) 315, 603
BseDI CCNNGG 4 cut(s) 237, 314, 438, 1021
BseGI GGATG 2 cut(s) 601, 775
BseLI CCNNNNNNNGG 2 cut(s) 736, 785
BseMII CTCAG 1 cut(s) 683
BseNI ACTGG 1 cut(s) 1046
BseRI GAGGAG 4 cut(s) 179, 182, 484, 804
BseXI GCAGC 2 cut(s) 227, 322
BseYI CCCAGC 2 cut(s) 26, 46
BsgI GTGCAG 1 cut(s) 234
BshFI GGCC 2 cut(s) 464, 1128
BshNI GGYRCC 1 cut(s) 739
BsiSI CCGG 3 cut(s) 135, 465, 829
BsiWI CGTACG 1 cut(s) 9
BslFI GGGAC 1 cut(s) 770
BslI CCNNNNNNNGG 2 cut(s) 736, 785
BsmAI GTCTC 1 cut(s) 264
BsmFI GGGAC 1 cut(s) 770
BsmI GAATGC 1 cut(s) 507
BsnI GGCC 2 cut(s) 464, 1128
Bsp1286I GDGCHC 1 cut(s) 53
Bsp13I TCCGGA 1 cut(s) 134
Bsp1407I TGTACA 1 cut(s) 948
Bsp143I GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
BspACI CCGC 1 cut(s) 1129
BspANI GGCC 2 cut(s) 464, 1128
BspCNI CTCAG 1 cut(s) 682
BspEI TCCGGA 1 cut(s) 134
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 2 cut(s) 716, 741
BspMAI CTGCAG 1 cut(s) 156
BspMI ACCTGC 2 cut(s) 874, 929
BspPI GGATC 5 cut(s) 549, 560, 686, 840, 968
BspT107I GGYRCC 1 cut(s) 739
BsrGI TGTACA 1 cut(s) 948
BsrI ACTGG 1 cut(s) 1046
BssECI CCNNGG 4 cut(s) 237, 314, 438, 1021
BssMI GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
BssT1I CCWWGG 3 cut(s) 237, 438, 1021
Bst2UI CCWGG 2 cut(s) 315, 603
Bst4CI ACNGT 5 cut(s) 143, 181, 429, 452, 658
Bst6I CTCTTC 1 cut(s) 1059
BstAPI GCANNNNNTGC 1 cut(s) 221
BstAUI TGTACA 1 cut(s) 948
BstDEI CTNAG 2 cut(s) 669, 839
BstENI CCTNNNNNAGG 1 cut(s) 783
BstF5I GGATG 2 cut(s) 601, 775
BstH2I RGCGCY 1 cut(s) 668
BstHHI GCGC 1 cut(s) 667
BstKTI GATC 8 cut(s) 69, 544, 555, 694, 835, 976, 1185, 1277
BstMAI GTCTC 1 cut(s) 264
BstMBI GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
BstMWI GCNNNNNNNGC 6 cut(s) 206, 215, 221, 310, 1017, 1026
BstNI CCWGG 2 cut(s) 315, 603
BstNSI RCATGY 2 cut(s) 260, 1165
BstSCI CCNGG 4 cut(s) 313, 464, 601, 828
BstSFI CTRYAG 1 cut(s) 152
BstV1I GCAGC 2 cut(s) 227, 322
BstX2I RGATCY 3 cut(s) 691, 832, 1274
BstXI CCANNNNNNTGG 1 cut(s) 750
BstYI RGATCY 3 cut(s) 691, 832, 1274
BsuI GTATCC 1 cut(s) 412
BsuRI GGCC 2 cut(s) 464, 1128
BtsCI GGATG 2 cut(s) 601, 775
BtsI GCAGTG 1 cut(s) 899
BtsIMutI CAGTG 4 cut(s) 425, 562, 677, 899
BveI ACCTGC 2 cut(s) 874, 929
CciI TCATGA 1 cut(s) 63
CfoI GCGC 1 cut(s) 667
Cfr13I GGNCC 2 cut(s) 132, 1043
Csp6I GTAC 4 cut(s) 10, 177, 614, 949
CviAII CATG 6 cut(s) 64, 257, 696, 711, 769, 1162
CviQI GTAC 4 cut(s) 10, 177, 614, 949
DdeI CTNAG 2 cut(s) 669, 839
DpnI GATC 8 cut(s) 68, 543, 554, 693, 834, 975, 1184, 1276
DpnII GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
EaeI YGGCCR 2 cut(s) 462, 1126
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
Eco130I CCWWGG 3 cut(s) 237, 438, 1021
Eco24I GRGCYC 1 cut(s) 53
Eco32I GATATC 1 cut(s) 323
Eco47I GGWCC 2 cut(s) 132, 1043
Eco57I CTGAAG 1 cut(s) 603
EcoNI CCTNNNNNAGG 1 cut(s) 783
EcoRII CCWGG 2 cut(s) 313, 601
EcoRV GATATC 1 cut(s) 323
EcoT14I CCWWGG 3 cut(s) 237, 438, 1021
EcoT38I GRGCYC 1 cut(s) 53
ErhI CCWWGG 3 cut(s) 237, 438, 1021
FaeI CATG 6 cut(s) 67, 260, 699, 714, 772, 1165
FaqI GGGAC 1 cut(s) 770
FatI CATG 6 cut(s) 63, 256, 695, 710, 768, 1161
FauNDI CATATG 1 cut(s) 1039
FbaI TGATCA 1 cut(s) 66
Fnu4HI GCNGC 3 cut(s) 216, 311, 1129
FokI GGATG 2 cut(s) 608, 762
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 3 cut(s) 216, 311, 1129
FspBI CTAG 1 cut(s) 627
GlaI GCGC 1 cut(s) 666
GluI GCNGC 3 cut(s) 216, 311, 1129
GsaI CCCAGC 2 cut(s) 30, 50
GsuI CTGGAG 1 cut(s) 222
HaeII RGCGCY 1 cut(s) 668
HaeIII GGCC 2 cut(s) 464, 1128
HapII CCGG 3 cut(s) 135, 465, 829
HhaI GCGC 1 cut(s) 667
Hin1II CATG 6 cut(s) 67, 260, 699, 714, 772, 1165
Hin6I GCGC 1 cut(s) 665
HinP1I GCGC 1 cut(s) 665
HinfI GANTC 4 cut(s) 365, 758, 772, 887
HpaII CCGG 3 cut(s) 135, 465, 829
HphI GGTGA 5 cut(s) 155, 644, 960, 1143, 1235
Hpy188I TCNGA 3 cut(s) 457, 691, 814
Hpy188III TCNNGA 4 cut(s) 64, 135, 347, 1186
HpyAV CCTTC 5 cut(s) 236, 409, 627, 1158, 1220
HpyCH4III ACNGT 5 cut(s) 143, 181, 429, 452, 658
HpyF10VI GCNNNNNNNGC 6 cut(s) 206, 215, 221, 310, 1017, 1026
HpyF3I CTNAG 2 cut(s) 669, 839
Hsp92II CATG 6 cut(s) 67, 260, 699, 714, 772, 1165
HspAI GCGC 1 cut(s) 665
Kpn2I TCCGGA 1 cut(s) 134
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
LmnI GCTCC 2 cut(s) 301, 720
Lsp1109I GCAGC 2 cut(s) 227, 322
LweI GCATC 6 cut(s) 364, 850, 974, 1038, 1202, 1209
MaeI CTAG 1 cut(s) 627
MaeIII GTNAC 2 cut(s) 557, 1080
MalI GATC 8 cut(s) 68, 543, 554, 693, 834, 975, 1184, 1276
MboI GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
MboII GAAGA 5 cut(s) 52, 362, 815, 827, 1046
MflI RGATCY 3 cut(s) 691, 832, 1274
MhlI GDGCHC 1 cut(s) 53
MluCI AATT 8 cut(s) 98, 127, 261, 291, 329, 877, 1212, 1230
MlyI GAGTC 3 cut(s) 374, 752, 781
MroI TCCGGA 1 cut(s) 134
MroXI GAANNNNTTC 1 cut(s) 98
MseI TTAA 4 cut(s) 782, 1068, 1133, 1288
MspI CCGG 3 cut(s) 135, 465, 829
MspR9I CCNGG 4 cut(s) 315, 466, 603, 830
Mva1269I GAATGC 1 cut(s) 507
MvaI CCWGG 2 cut(s) 315, 603
MwoI GCNNNNNNNGC 6 cut(s) 206, 215, 221, 310, 1017, 1026
NciI CCSGG 2 cut(s) 466, 830
NdeI CATATG 1 cut(s) 1039
NdeII GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
NlaIII CATG 6 cut(s) 67, 260, 699, 714, 772, 1165
NlaIV GGNNCC 2 cut(s) 716, 741
NmuCI GTSAC 1 cut(s) 557
NspI RCATGY 2 cut(s) 260, 1165
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 2 cut(s) 874, 929
PctI GAATGC 1 cut(s) 507
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 1 cut(s) 887
Pfl23II CGTACG 1 cut(s) 9
PfoI TCCNGGA 1 cut(s) 828
PkrI GCNGC 3 cut(s) 217, 312, 1130
PleI GAGTC 3 cut(s) 373, 752, 780
PpsI GAGTC 3 cut(s) 373, 752, 780
PsiI TTATAA 1 cut(s) 1217
Psp6I CCWGG 2 cut(s) 313, 601
PspFI CCCAGC 2 cut(s) 26, 46
PspGI CCWGG 2 cut(s) 313, 601
PspLI CGTACG 1 cut(s) 9
PspN4I GGNNCC 2 cut(s) 716, 741
PspPI GGNCC 2 cut(s) 132, 1043
PstI CTGCAG 1 cut(s) 156
PsuI RGATCY 3 cut(s) 691, 832, 1274
RsaI GTAC 4 cut(s) 11, 178, 615, 950
RsaNI GTAC 4 cut(s) 10, 177, 614, 949
SaqAI TTAA 4 cut(s) 782, 1068, 1133, 1288
SatI GCNGC 3 cut(s) 216, 311, 1129
Sau3AI GATC 8 cut(s) 66, 541, 552, 691, 832, 973, 1182, 1274
Sau96I GGNCC 2 cut(s) 132, 1043
SchI GAGTC 3 cut(s) 374, 752, 781
ScrFI CCNGG 4 cut(s) 315, 466, 603, 830
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 6 cut(s) 364, 850, 974, 1038, 1202, 1209
SfcI CTRYAG 1 cut(s) 152
SinI GGWCC 2 cut(s) 132, 1043
SmlI CTYRAG 2 cut(s) 274, 1186
SmoI CTYRAG 2 cut(s) 274, 1186
Sse9I AATT 8 cut(s) 98, 127, 261, 291, 329, 877, 1212, 1230
SsiI CCGC 1 cut(s) 1129
SspMI CTAG 1 cut(s) 627
StyD4I CCNGG 4 cut(s) 313, 464, 601, 828
StyI CCWWGG 3 cut(s) 237, 438, 1021
TaaI ACNGT 5 cut(s) 143, 181, 429, 452, 658
TaqI TCGA 3 cut(s) 368, 544, 1177
TasI AATT 8 cut(s) 98, 127, 261, 291, 329, 877, 1212, 1230
TatI WGTACW 1 cut(s) 948
TauI GCSGC 1 cut(s) 1131
TfiI GAWTC 1 cut(s) 887
Tru1I TTAA 4 cut(s) 782, 1068, 1133, 1288
Tru9I TTAA 4 cut(s) 782, 1068, 1133, 1288
TscAI CASTG 4 cut(s) 432, 562, 677, 906
TseFI GTSAC 1 cut(s) 557
TseI GCWGC 2 cut(s) 215, 310
Tsp45I GTSAC 1 cut(s) 557
TspDTI ATGAA 3 cut(s) 52, 481, 1274
TspGWI ACGGA 2 cut(s) 1068, 1131
TspRI CASTG 4 cut(s) 432, 562, 677, 906
VpaK11BI GGWCC 2 cut(s) 132, 1043
XagI CCTNNNNNAGG 1 cut(s) 783
XceI RCATGY 2 cut(s) 260, 1165
XcmI CCANNNNNNNNNTGG 2 cut(s) 386, 931
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.