RLG00000015231

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000108
Physical Location & Seq
Reverse (-)
63389297 .. 63392106
2810 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015231

Sequence Viewer

Length: 1584 bp
ATGGTTTCTTACGAGTACGTTCTGGGTGGAGTCCTGGCTTCTCTGCTGGCATCTGTTTTCATCATGATAATCAATAGTAGTAGAAAGGTGAAGGTAGTGGGGGGTGTGAAGAGTGTTAATGGGTTTGTGAGGTTGCCGCAAAACGGTGCGTTTGCGCCGGTGGTGGTGGAGGAGGAGAAAGGTACCGACGTCGTCATTGTCGGCGCCGGAGTTGCCGGTGCAGCTCTTGCTTACACTCTTGCTAAGGAAGGACGCCGTGTACATGTCATCGAAAGAGACTTGAGTGAGCCGGACAGAATTGTTGGTGAGCTTTTGCAGCCTGGGGGTTATCTCAAGTTGATCGAGTTGGGTCTTGAGGACTGTGCAAATGAATCCATTGATGCTCAGAAGGTGTTTGGTTATGCTCTCTACAAAGATGGGAAGGATACAAAACTTTCTTATCCCTTGGAAAATTACAGTTCAGATATAGCTGGGAGAAGTTTCCACAATGGGCGTTTCATCCAAAGAATGCGTGAAAAAGCTGCAACTCTTTCAAATGTAAAATTGGAACAAGGGACAGTGACAACGCTAATTGAAGAAAAGGGCACTATCAAAGGAGTGATTTACAAGAACAAGGCTGGAGAGGAGTTCAGAACATATGCTCCACTAACAATCGTGTGTGATGGCTGCTTTTCAAATCTGCGCAAAAATCTCAGTGCTCCAAAGGTTGAAAGTCCCTCTTGTTTTGTTGGTTTGGTGTTGGAGAACTGTGACCTGCCACACGCAAATCATGGTCATGTGATTTTGGGAGACCCTTCACCCATCCTGTTTTATCCTATTAGTAGCACAGAGATTCGTTGTTTGGTTGATGTACCTGGAACAAAAGTTCCTTCAGTAGCTAGTGGTGAAATGGCTAAGTATTTGAAAACTGTGGTGGCTCCTCAGATTCCTCCTCAGCTCTACAATTCTTTTATAGCTGCAATTGACAAGGGAAACATCAAATCCATGCAAAACAAAAGCATGGCTGCAAATCCTCTTCCCACTCCTGGTGCACTTTTATTGGGGGATTCATTCAACATGAGGCATCCTTTAACAGGAGGAGGAATGACTGTGGCTCTTTCAGACATTGTTCTTCTTCGGGATCTTCTTAGACCCCTACATGATCTCAATGATGCAGCTGCTTTGTGCAATTACCTTGAATCATTCTACACATTGCGTAAGCCTGTGTCATCTACCATAAACACATTGGCAGGTGCCCTGTACAAGGTGTTTTGTGCATCACCTGATCCAGCAAGACAGGAAATGCGTGAAGCATGTTTTGGTTATTTGAGCCTTGGAGGCATCTGTTCATATGGACCAGTATCTCTTCTCTCTGGTCTTAACCCTCGGCCACTGCACCTATTTCTCCATTTCTTTGCTGTTGCCATCTATGGTGTTGGGCGCTTGATGCTTCCATTCCCTTCTCCTCAACGCACATGGCTTGGGGTTAGATTGATCTTGAGTGCATCAGGGATCATATTTCCCATTATAAACGGTGAAGGAGTTCGACAGATGTTCTTTCCTGCAACAGTACCAGCATATTACAGAGCTCCTCCTGTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

528

Amino Acids

57.04

Weight (kDa)

8.64

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 62 - 374 1.1e-19 FAD binding domain
DAO PF01266 63 - 93 4.9e-08 FAD dependent oxidoreductase
FAD_binding_2 PF00890 63 - 92 1e-05 FAD binding domain
NAD_binding_8 PF13450 66 - 92 2.1e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 214 - 482 2e-117 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1508
AarI CACCTGC 1 cut(s) 1220
AatII GACGTC 1 cut(s) 192
Acc16I TGCGCA 1 cut(s) 683
Acc36I ACCTGC 2 cut(s) 762, 1220
Acc65I GGTACC 1 cut(s) 182
AccB1I GGYRCC 3 cut(s) 182, 203, 1232
AciI CCGC 1 cut(s) 137
AclWI GGATC 3 cut(s) 1128, 1259, 1499
AcoI YGGCCR 1 cut(s) 1367
AcuI CTGAAG 1 cut(s) 855
AcyI GRCGYC 3 cut(s) 189, 204, 253
AfaI GTAC 6 cut(s) 17, 184, 261, 852, 1241, 1551
AfiI CCNNNNNNNGG 4 cut(s) 143, 1025, 1073, 1243
AflIII ACRYGT 1 cut(s) 262
AgsI TTSAA 8 cut(s) 534, 575, 675, 710, 904, 1054, 1178, 1580
AjnI CCWGG 4 cut(s) 33, 319, 853, 1024
AjuI GAANNNNNNNTTGG 2 cut(s) 1281, 1313
AloI GAACNNNNNNTCC 6 cut(s) 625, 657, 849, 850, 881, 882
AluBI AGCT 9 cut(s) 224, 310, 470, 521, 878, 937, 956, 1157, 1568
AluI AGCT 9 cut(s) 224, 310, 470, 521, 878, 937, 956, 1157, 1568
Alw21I GWGCWC 3 cut(s) 700, 1033, 1570
Alw26I GTCTC 2 cut(s) 270, 783
Alw44I GTGCAC 1 cut(s) 1029
AlwI GGATC 3 cut(s) 1128, 1259, 1499
AoxI GGCC 1 cut(s) 1367
ApaLI GTGCAC 1 cut(s) 1029
ApeKI GCWGC 8 cut(s) 221, 316, 521, 666, 956, 1004, 1154, 1157
Asp700I GAANNNNTTC 1 cut(s) 1521
Asp718I GGTACC 1 cut(s) 182
AspLEI GCGC 4 cut(s) 157, 206, 684, 1422
AspS9I GGNCC 1 cut(s) 1334
AsuHPI GGTGA 6 cut(s) 100, 317, 789, 896, 1251, 1526
AvaII GGWCC 1 cut(s) 1334
BaeGI GKGCMC 3 cut(s) 587, 1033, 1237
BaeI ACNNNNGTAYC 2 cut(s) 174, 207
BanI GGYRCC 3 cut(s) 182, 203, 1232
BanII GRGCYC 1 cut(s) 1570
Bbv12I GWGCWC 3 cut(s) 700, 1033, 1570
BbvCI CCTCAGC 1 cut(s) 933
BbvI GCAGC 8 cut(s) 233, 328, 508, 653, 943, 991, 1144, 1166
BccI CCATC 4 cut(s) 410, 656, 809, 1412
BceAI ACGGC 1 cut(s) 240
BciT130I CCWGG 4 cut(s) 35, 321, 855, 1026
BciVI GTATCC 1 cut(s) 418
BcoDI GTCTC 2 cut(s) 270, 783
BfaI CTAG 1 cut(s) 879
BfoI RGCGCY 2 cut(s) 207, 1423
BfuAI ACCTGC 2 cut(s) 762, 1220
BfuI GTATCC 1 cut(s) 418
BglI GCCNNNNNGGC 1 cut(s) 1317
BisI GCNGC 9 cut(s) 137, 222, 317, 522, 667, 957, 1005, 1155, 1158
BlsI GCNGC 9 cut(s) 138, 223, 318, 523, 668, 958, 1006, 1156, 1159
Bme1390I CCNGG 4 cut(s) 35, 321, 855, 1026
Bme18I GGWCC 1 cut(s) 1334
BmgT120I GGNCC 1 cut(s) 1334
BmiI GGNNCC 4 cut(s) 184, 205, 918, 1234
BmrFI CCNGG 4 cut(s) 35, 321, 855, 1026
BmsI GCATC 8 cut(s) 59, 370, 1072, 1141, 1265, 1329, 1416, 1493
BpmI CTGGAG 1 cut(s) 639
Bpu10I CCTNAGC 2 cut(s) 243, 933
BpuEI CTTGAG 4 cut(s) 301, 317, 374, 1498
BsaHI GRCGYC 3 cut(s) 189, 204, 253
BsaI GGTCTC 1 cut(s) 783
BsaJI CCNNGG 4 cut(s) 320, 444, 1312, 1364
BsaXI ACNNNNNCTCC 2 cut(s) 625, 655
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 1025, 1073, 1243
Bse118I RCCGGY 2 cut(s) 157, 215
Bse1I ACTGG 1 cut(s) 1337
Bse3DI GCAATG 1 cut(s) 1190
BseBI CCWGG 4 cut(s) 35, 321, 855, 1026
BseDI CCNNGG 4 cut(s) 320, 444, 1312, 1364
BseGI GGATG 3 cut(s) 498, 801, 1063
BseLI CCNNNNNNNGG 4 cut(s) 143, 1025, 1073, 1243
BseMI GCAATG 1 cut(s) 1190
BseMII CTCAG 4 cut(s) 398, 706, 935, 947
BseNI ACTGG 1 cut(s) 1337
BseRI GAGGAG 8 cut(s) 185, 188, 638, 909, 921, 1092, 1434, 1560
BseSI GKGCMC 3 cut(s) 587, 1033, 1237
BseXI GCAGC 8 cut(s) 233, 328, 508, 653, 943, 991, 1144, 1166
BseYI CCCAGC 1 cut(s) 470
BsgI GTGCAG 2 cut(s) 240, 1358
BshFI GGCC 1 cut(s) 1369
BshNI GGYRCC 3 cut(s) 182, 203, 1232
BsiHKAI GWGCWC 3 cut(s) 700, 1033, 1570
BsiSI CCGG 4 cut(s) 158, 207, 216, 290
BslFI GGGAC 2 cut(s) 568, 699
BslI CCNNNNNNNGG 4 cut(s) 143, 1025, 1073, 1243
BsmAI GTCTC 2 cut(s) 270, 783
BsmFI GGGAC 2 cut(s) 568, 699
BsmI GAATGC 1 cut(s) 513
BsnI GGCC 1 cut(s) 1369
Bso31I GGTCTC 1 cut(s) 783
Bsp1286I GDGCHC 5 cut(s) 587, 700, 1033, 1237, 1570
Bsp1407I TGTACA 2 cut(s) 259, 1239
Bsp143I GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
BspACI CCGC 1 cut(s) 137
BspANI GGCC 1 cut(s) 1369
BspCNI CTCAG 4 cut(s) 397, 705, 934, 946
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 4 cut(s) 184, 205, 918, 1234
BspMI ACCTGC 2 cut(s) 762, 1220
BspPI GGATC 3 cut(s) 1128, 1259, 1499
BspT107I GGYRCC 3 cut(s) 182, 203, 1232
BspTNI GGTCTC 1 cut(s) 783
BsrDI GCAATG 1 cut(s) 1190
BsrFI RCCGGY 2 cut(s) 157, 215
BsrGI TGTACA 2 cut(s) 259, 1239
BsrI ACTGG 1 cut(s) 1337
BssAI RCCGGY 2 cut(s) 157, 215
BssECI CCNNGG 4 cut(s) 320, 444, 1312, 1364
BssMI GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
BssNI GRCGYC 3 cut(s) 189, 204, 253
BssT1I CCWWGG 2 cut(s) 444, 1312
Bst2UI CCWGG 4 cut(s) 35, 321, 855, 1026
Bst4CI ACNGT 9 cut(s) 146, 362, 458, 559, 749, 910, 1090, 1514, 1549
Bst6I CTCTTC 3 cut(s) 104, 1020, 1350
BstACI GRCGYC 3 cut(s) 189, 204, 253
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 2 cut(s) 259, 1239
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 7 cut(s) 243, 384, 692, 894, 921, 933, 1127
BstENI CCTNNNNNAGG 2 cut(s) 1071, 1241
BstF5I GGATG 3 cut(s) 498, 801, 1063
BstH2I RGCGCY 2 cut(s) 207, 1423
BstHHI GCGC 4 cut(s) 157, 206, 684, 1422
BstKTI GATC 6 cut(s) 342, 1123, 1144, 1267, 1476, 1494
BstMAI GTCTC 2 cut(s) 270, 783
BstMBI GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
BstMWI GCNNNNNNNGC 6 cut(s) 212, 221, 227, 316, 1317, 1426
BstNI CCWGG 4 cut(s) 35, 321, 855, 1026
BstNSI RCATGY 2 cut(s) 266, 1296
BstSCI CCNGG 4 cut(s) 33, 319, 853, 1024
BstSLI GKGCMC 3 cut(s) 587, 1033, 1237
BstV1I GCAGC 8 cut(s) 233, 328, 508, 653, 943, 991, 1144, 1166
BstX2I RGATCY 1 cut(s) 1120
BstYI RGATCY 1 cut(s) 1120
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 1 cut(s) 1369
BtsCI GGATG 3 cut(s) 498, 801, 1063
BtsI GCAGTG 1 cut(s) 1370
BtsIMutI CAGTG 3 cut(s) 564, 700, 1370
BveI ACCTGC 2 cut(s) 762, 1220
Cac8I GCNNGC 1 cut(s) 48
CciI TCATGA 1 cut(s) 63
CfoI GCGC 4 cut(s) 157, 206, 684, 1422
Cfr10I RCCGGY 2 cut(s) 157, 215
Cfr13I GGNCC 1 cut(s) 1334
CseI GACGC 1 cut(s) 261
Csp6I GTAC 6 cut(s) 16, 183, 260, 851, 1240, 1550
CviQI GTAC 6 cut(s) 16, 183, 260, 851, 1240, 1550
DdeI CTNAG 7 cut(s) 243, 384, 692, 894, 921, 933, 1127
DinI GGCGCC 1 cut(s) 205
DpnI GATC 6 cut(s) 341, 1122, 1143, 1266, 1475, 1493
DpnII GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
EaeI YGGCCR 1 cut(s) 1367
Eam1104I CTCTTC 3 cut(s) 104, 1020, 1350
EarI CTCTTC 3 cut(s) 104, 1020, 1350
Ecl136II GAGCTC 1 cut(s) 1568
Eco130I CCWWGG 2 cut(s) 444, 1312
Eco24I GRGCYC 1 cut(s) 1570
Eco31I GGTCTC 1 cut(s) 783
Eco47I GGWCC 1 cut(s) 1334
Eco53kI GAGCTC 1 cut(s) 1568
Eco57I CTGAAG 1 cut(s) 855
EcoICRI GAGCTC 1 cut(s) 1568
EcoNI CCTNNNNNAGG 2 cut(s) 1071, 1241
EcoRII CCWGG 4 cut(s) 33, 319, 853, 1024
EcoT14I CCWWGG 2 cut(s) 444, 1312
EcoT38I GRGCYC 1 cut(s) 1570
EgeI GGCGCC 1 cut(s) 205
EheI GGCGCC 1 cut(s) 205
ErhI CCWWGG 2 cut(s) 444, 1312
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FaqI GGGAC 2 cut(s) 568, 699
FauNDI CATATG 2 cut(s) 637, 1330
Fnu4HI GCNGC 9 cut(s) 137, 222, 317, 522, 667, 957, 1005, 1155, 1158
FokI GGATG 3 cut(s) 485, 788, 1050
FriOI GRGCYC 1 cut(s) 1570
Fsp4HI GCNGC 9 cut(s) 137, 222, 317, 522, 667, 957, 1005, 1155, 1158
FspBI CTAG 1 cut(s) 879
FspI TGCGCA 1 cut(s) 683
GlaI GCGC 4 cut(s) 156, 205, 683, 1421
GluI GCNGC 9 cut(s) 137, 222, 317, 522, 667, 957, 1005, 1155, 1158
GsaI CCCAGC 1 cut(s) 474
GsuI CTGGAG 1 cut(s) 639
HaeII RGCGCY 2 cut(s) 207, 1423
HaeIII GGCC 1 cut(s) 1369
HapII CCGG 4 cut(s) 158, 207, 216, 290
HgaI GACGC 1 cut(s) 261
HhaI GCGC 4 cut(s) 157, 206, 684, 1422
Hin1I GRCGYC 3 cut(s) 189, 204, 253
Hin6I GCGC 4 cut(s) 155, 204, 682, 1420
HinP1I GCGC 4 cut(s) 155, 204, 682, 1420
HinfI GANTC 6 cut(s) 30, 371, 832, 925, 1046, 1178
HpaII CCGG 4 cut(s) 158, 207, 216, 290
HphI GGTGA 6 cut(s) 100, 317, 789, 896, 1251, 1526
Hpy166II GTNNAC 2 cut(s) 260, 1031
Hpy188I TCNGA 5 cut(s) 387, 463, 632, 924, 1102
Hpy188III TCNNGA 4 cut(s) 64, 353, 1118, 1477
Hpy8I GTNNAC 2 cut(s) 260, 1031
Hpy99I CGWCG 2 cut(s) 191, 194
HpyAV CCTTC 8 cut(s) 85, 242, 382, 415, 804, 879, 1449, 1511
HpyCH4III ACNGT 9 cut(s) 146, 362, 458, 559, 749, 910, 1090, 1514, 1549
HpyCH4IV ACGT 2 cut(s) 18, 189
HpyF10VI GCNNNNNNNGC 6 cut(s) 212, 221, 227, 316, 1317, 1426
HpyF3I CTNAG 7 cut(s) 243, 384, 692, 894, 921, 933, 1127
HpySE526I ACGT 2 cut(s) 18, 189
Hsp92I GRCGYC 3 cut(s) 189, 204, 253
HspAI GCGC 4 cut(s) 155, 204, 682, 1420
KasI GGCGCC 1 cut(s) 203
KpnI GGTACC 1 cut(s) 186
Kzo9I GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
LmnI GCTCC 4 cut(s) 646, 703, 922, 1573
Lsp1109I GCAGC 8 cut(s) 233, 328, 508, 653, 943, 991, 1144, 1166
LweI GCATC 8 cut(s) 59, 370, 1072, 1141, 1265, 1329, 1416, 1493
MaeI CTAG 1 cut(s) 879
MaeII ACGT 2 cut(s) 18, 189
MaeIII GTNAC 2 cut(s) 559, 749
MalI GATC 6 cut(s) 341, 1122, 1143, 1266, 1475, 1493
MboI GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
MboII GAAGA 7 cut(s) 121, 587, 1007, 1103, 1106, 1115, 1337
MfeI CAATTG 1 cut(s) 960
MflI RGATCY 1 cut(s) 1120
MhlI GDGCHC 5 cut(s) 587, 700, 1033, 1237, 1570
MluCI AATT 7 cut(s) 297, 451, 542, 570, 943, 960, 1168
Mly113I GGCGCC 1 cut(s) 204
MlyI GAGTC 1 cut(s) 39
MmeI TCCRAC 1 cut(s) 720
MroXI GAANNNNTTC 1 cut(s) 1521
MseI TTAA 3 cut(s) 117, 1070, 1359
MslI CAYNNNNRTG 1 cut(s) 774
MspA1I CMGCKG 1 cut(s) 1157
MspI CCGG 4 cut(s) 158, 207, 216, 290
MspR9I CCNGG 4 cut(s) 35, 321, 855, 1026
MunI CAATTG 1 cut(s) 960
Mva1269I GAATGC 1 cut(s) 513
MvaI CCWGG 4 cut(s) 35, 321, 855, 1026
MwoI GCNNNNNNNGC 6 cut(s) 212, 221, 227, 316, 1317, 1426
NarI GGCGCC 1 cut(s) 204
NdeI CATATG 2 cut(s) 637, 1330
NdeII GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
NlaIV GGNNCC 4 cut(s) 184, 205, 918, 1234
NmeAIII GCCGAG 1 cut(s) 1345
NmuCI GTSAC 2 cut(s) 559, 749
NsbI TGCGCA 1 cut(s) 683
NspI RCATGY 2 cut(s) 266, 1296
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 1 cut(s) 1220
PciI ACATGT 1 cut(s) 262
PctI GAATGC 1 cut(s) 513
PdmI GAANNNNTTC 1 cut(s) 1521
PfeI GAWTC 5 cut(s) 371, 832, 925, 1046, 1178
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 9 cut(s) 138, 223, 318, 523, 668, 958, 1006, 1156, 1159
PleI GAGTC 1 cut(s) 38
PluTI GGCGCC 1 cut(s) 207
PpsI GAGTC 1 cut(s) 38
PscI ACATGT 1 cut(s) 262
PsiI TTATAA 1 cut(s) 1508
Psp124BI GAGCTC 1 cut(s) 1570
Psp6I CCWGG 4 cut(s) 33, 319, 853, 1024
PspFI CCCAGC 1 cut(s) 470
PspGI CCWGG 4 cut(s) 33, 319, 853, 1024
PspN4I GGNNCC 4 cut(s) 184, 205, 918, 1234
PspPI GGNCC 1 cut(s) 1334
PsuI RGATCY 1 cut(s) 1120
PsyI GACNNNGTC 1 cut(s) 191
PvuII CAGCTG 1 cut(s) 1157
RsaI GTAC 6 cut(s) 17, 184, 261, 852, 1241, 1551
RsaNI GTAC 6 cut(s) 16, 183, 260, 851, 1240, 1550
RseI CAYNNNNRTG 1 cut(s) 774
SacI GAGCTC 1 cut(s) 1570
SaqAI TTAA 3 cut(s) 117, 1070, 1359
SatI GCNGC 9 cut(s) 137, 222, 317, 522, 667, 957, 1005, 1155, 1158
Sau3AI GATC 6 cut(s) 339, 1120, 1141, 1264, 1473, 1491
Sau96I GGNCC 1 cut(s) 1334
SchI GAGTC 1 cut(s) 39
ScrFI CCNGG 4 cut(s) 35, 321, 855, 1026
SduI GDGCHC 5 cut(s) 587, 700, 1033, 1237, 1570
SfaNI GCATC 8 cut(s) 59, 370, 1072, 1141, 1265, 1329, 1416, 1493
SfoI GGCGCC 1 cut(s) 205
SgrAI CRCCGGYG 1 cut(s) 157
SinI GGWCC 1 cut(s) 1334
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 4 cut(s) 280, 332, 353, 1477
SmoI CTYRAG 4 cut(s) 280, 332, 353, 1477
Sse9I AATT 7 cut(s) 297, 451, 542, 570, 943, 960, 1168
SsiI CCGC 1 cut(s) 137
SspDI GGCGCC 1 cut(s) 203
SspMI CTAG 1 cut(s) 879
SstI GAGCTC 1 cut(s) 1570
StyD4I CCNGG 4 cut(s) 33, 319, 853, 1024
StyI CCWWGG 2 cut(s) 444, 1312
TaaI ACNGT 9 cut(s) 146, 362, 458, 559, 749, 910, 1090, 1514, 1549
TaiI ACGT 2 cut(s) 21, 192
TaqI TCGA 3 cut(s) 270, 342, 1525
TasI AATT 7 cut(s) 297, 451, 542, 570, 943, 960, 1168
TatI WGTACW 2 cut(s) 259, 1239
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 5 cut(s) 371, 832, 925, 1046, 1178
Tru1I TTAA 3 cut(s) 117, 1070, 1359
Tru9I TTAA 3 cut(s) 117, 1070, 1359
TscAI CASTG 3 cut(s) 564, 700, 1377
TseFI GTSAC 2 cut(s) 559, 749
TseI GCWGC 8 cut(s) 221, 316, 521, 666, 956, 1004, 1154, 1157
Tsp45I GTSAC 2 cut(s) 559, 749
TspDTI ATGAA 5 cut(s) 49, 384, 487, 1038, 1317
TspRI CASTG 3 cut(s) 564, 700, 1377
Tth111I GACNNNGTC 1 cut(s) 191
VneI GTGCAC 1 cut(s) 1029
VpaK11BI GGWCC 1 cut(s) 1334
XagI CCTNNNNNAGG 2 cut(s) 1071, 1241
XceI RCATGY 2 cut(s) 266, 1296
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XmnI GAANNNNTTC 1 cut(s) 1521
XspI CTAG 1 cut(s) 879
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.