squalene
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SE | PF08491 | 5 - 240 | 8.9e-88 | Squalene epoxidase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 496, 551 |
| Acc16I | TGCGCA | 2 cut(s) | 56, 527 |
| Acc36I | ACCTGC | 2 cut(s) | 496, 551 |
| AciI | CCGC | 1 cut(s) | 289 |
| AclWI | GGATC | 2 cut(s) | 590, 603 |
| AcoI | YGGCCR | 1 cut(s) | 286 |
| AfaI | GTAC | 3 cut(s) | 225, 240, 572 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 356, 404 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 5 cut(s) | 48, 83, 246, 385, 509 |
| AjnI | CCWGG | 2 cut(s) | 226, 355 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 612, 644 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 30 |
| AluBI | AGCT | 3 cut(s) | 251, 642, 730 |
| AluI | AGCT | 3 cut(s) | 251, 642, 730 |
| Alw21I | GWGCWC | 1 cut(s) | 73 |
| Alw26I | GTCTC | 3 cut(s) | 66, 156, 678 |
| Alw44I | GTGCAC | 1 cut(s) | 69 |
| AlwI | GGATC | 2 cut(s) | 590, 603 |
| AoxI | GGCC | 1 cut(s) | 286 |
| ApaLI | GTGCAC | 1 cut(s) | 69 |
| ApeKI | GCWGC | 2 cut(s) | 39, 335 |
| AspLEI | GCGC | 2 cut(s) | 57, 528 |
| AspS9I | GGNCC | 1 cut(s) | 665 |
| AsuHPI | GGTGA | 2 cut(s) | 162, 582 |
| AvaII | GGWCC | 1 cut(s) | 665 |
| BaeGI | GKGCMC | 1 cut(s) | 73 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 222, 255 |
| BamHI | GGATCC | 1 cut(s) | 595 |
| Bbv12I | GWGCWC | 1 cut(s) | 73 |
| BbvI | GCAGC | 2 cut(s) | 26, 322 |
| BccI | CCATC | 1 cut(s) | 29 |
| BciT130I | CCWGG | 2 cut(s) | 228, 357 |
| BcoDI | GTCTC | 3 cut(s) | 66, 156, 678 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BfuAI | ACCTGC | 2 cut(s) | 496, 551 |
| BisI | GCNGC | 3 cut(s) | 40, 289, 336 |
| BlsI | GCNGC | 3 cut(s) | 41, 290, 337 |
| Bme1390I | CCNGG | 2 cut(s) | 228, 357 |
| Bme18I | GGWCC | 1 cut(s) | 665 |
| BmgT120I | GGNCC | 1 cut(s) | 665 |
| BmiI | GGNNCC | 1 cut(s) | 597 |
| BmrFI | CCNGG | 2 cut(s) | 228, 357 |
| BmsI | GCATC | 4 cut(s) | 367, 403, 472, 596 |
| BoxI | GACNNNNGTC | 1 cut(s) | 670 |
| BsaAI | YACGTR | 1 cut(s) | 470 |
| BsaI | GGTCTC | 1 cut(s) | 156 |
| BsaJI | CCNNGG | 1 cut(s) | 201 |
| BsaWI | WCCGGW | 1 cut(s) | 592 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 28, 459, 489 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 356, 404 |
| Bse1I | ACTGG | 1 cut(s) | 668 |
| BseBI | CCWGG | 2 cut(s) | 228, 357 |
| BseDI | CCNNGG | 1 cut(s) | 201 |
| BseGI | GGATG | 3 cut(s) | 226, 382, 394 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 356, 404 |
| BseMII | CTCAG | 2 cut(s) | 79, 717 |
| BseNI | ACTGG | 1 cut(s) | 668 |
| BseRI | GAGGAG | 1 cut(s) | 423 |
| BseSI | GKGCMC | 1 cut(s) | 73 |
| BseXI | GCAGC | 2 cut(s) | 26, 322 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 288 |
| BsiHKAI | GWGCWC | 1 cut(s) | 73 |
| BsiSI | CCGG | 1 cut(s) | 593 |
| BslFI | GGGAC | 2 cut(s) | 72, 332 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 356, 404 |
| BsmAI | GTCTC | 3 cut(s) | 66, 156, 678 |
| BsmFI | GGGAC | 2 cut(s) | 72, 332 |
| BsmI | GAATGC | 1 cut(s) | 380 |
| BsnI | GGCC | 1 cut(s) | 288 |
| Bso31I | GGTCTC | 1 cut(s) | 156 |
| Bsp1286I | GDGCHC | 1 cut(s) | 73 |
| Bsp1407I | TGTACA | 1 cut(s) | 570 |
| Bsp143I | GATC | 4 cut(s) | 108, 451, 472, 595 |
| BspACI | CCGC | 1 cut(s) | 289 |
| BspANI | GGCC | 1 cut(s) | 288 |
| BspCNI | CTCAG | 2 cut(s) | 78, 718 |
| BspLI | GGNNCC | 1 cut(s) | 597 |
| BspMI | ACCTGC | 2 cut(s) | 496, 551 |
| BspPI | GGATC | 2 cut(s) | 590, 603 |
| BspTNI | GGTCTC | 1 cut(s) | 156 |
| BsrGI | TGTACA | 1 cut(s) | 570 |
| BsrI | ACTGG | 1 cut(s) | 668 |
| BssECI | CCNNGG | 1 cut(s) | 201 |
| BssMI | GATC | 4 cut(s) | 108, 451, 472, 595 |
| Bst2UI | CCWGG | 2 cut(s) | 228, 357 |
| Bst4CI | ACNGT | 2 cut(s) | 122, 421 |
| Bst6I | CTCTTC | 1 cut(s) | 681 |
| BstAUI | TGTACA | 1 cut(s) | 570 |
| BstBAI | YACGTR | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 1 cut(s) | 530 |
| BstDEI | CTNAG | 3 cut(s) | 65, 458, 726 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 402 |
| BstF5I | GGATG | 3 cut(s) | 226, 382, 394 |
| BstHHI | GCGC | 2 cut(s) | 57, 528 |
| BstKTI | GATC | 4 cut(s) | 111, 454, 475, 598 |
| BstMAI | GTCTC | 3 cut(s) | 66, 156, 678 |
| BstMBI | GATC | 4 cut(s) | 108, 451, 472, 595 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 285, 639 |
| BstNI | CCWGG | 2 cut(s) | 228, 357 |
| BstNSI | RCATGY | 2 cut(s) | 152, 627 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 670 |
| BstSCI | CCNGG | 2 cut(s) | 226, 355 |
| BstSLI | GKGCMC | 1 cut(s) | 73 |
| BstV1I | GCAGC | 2 cut(s) | 26, 322 |
| BstX2I | RGATCY | 1 cut(s) | 595 |
| BstYI | RGATCY | 1 cut(s) | 595 |
| BsuRI | GGCC | 1 cut(s) | 288 |
| BtsCI | GGATG | 3 cut(s) | 226, 382, 394 |
| BtsI | GCAGTG | 1 cut(s) | 521 |
| BtsIMutI | CAGTG | 3 cut(s) | 73, 521, 675 |
| BveI | ACCTGC | 2 cut(s) | 496, 551 |
| Cac8I | GCNNGC | 1 cut(s) | 530 |
| CfoI | GCGC | 2 cut(s) | 57, 528 |
| Cfr13I | GGNCC | 1 cut(s) | 665 |
| Csp6I | GTAC | 3 cut(s) | 224, 239, 571 |
| CviAII | CATG | 6 cut(s) | 143, 149, 331, 388, 479, 624 |
| CviJI | RGCY | 8 cut(s) | 39, 251, 288, 335, 532, 633, 642, 730 |
| CviKI_1 | RGCY | 8 cut(s) | 39, 251, 288, 335, 532, 633, 642, 730 |
| CviQI | GTAC | 3 cut(s) | 224, 239, 571 |
| DdeI | CTNAG | 3 cut(s) | 65, 458, 726 |
| DpnI | GATC | 4 cut(s) | 110, 453, 474, 597 |
| DpnII | GATC | 4 cut(s) | 108, 451, 472, 595 |
| EaeI | YGGCCR | 1 cut(s) | 286 |
| Eam1104I | CTCTTC | 1 cut(s) | 681 |
| EarI | CTCTTC | 1 cut(s) | 681 |
| Eco31I | GGTCTC | 1 cut(s) | 156 |
| Eco47I | GGWCC | 1 cut(s) | 665 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 402 |
| EcoRII | CCWGG | 2 cut(s) | 226, 355 |
| EcoT22I | ATGCAT | 1 cut(s) | 382 |
| FaeI | CATG | 6 cut(s) | 146, 152, 334, 391, 482, 627 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 76, 108 |
| FaqI | GGGAC | 2 cut(s) | 72, 332 |
| FatI | CATG | 6 cut(s) | 142, 148, 330, 387, 478, 623 |
| FauNDI | CATATG | 2 cut(s) | 10, 661 |
| Fnu4HI | GCNGC | 3 cut(s) | 40, 289, 336 |
| FokI | GGATG | 3 cut(s) | 233, 381, 389 |
| Fsp4HI | GCNGC | 3 cut(s) | 40, 289, 336 |
| FspBI | CTAG | 1 cut(s) | 252 |
| FspI | TGCGCA | 2 cut(s) | 56, 527 |
| GlaI | GCGC | 2 cut(s) | 56, 527 |
| GluI | GCNGC | 3 cut(s) | 40, 289, 336 |
| HaeIII | GGCC | 1 cut(s) | 288 |
| HapII | CCGG | 1 cut(s) | 593 |
| HhaI | GCGC | 2 cut(s) | 57, 528 |
| Hin1II | CATG | 6 cut(s) | 146, 152, 334, 391, 482, 627 |
| Hin6I | GCGC | 2 cut(s) | 55, 526 |
| HinP1I | GCGC | 2 cut(s) | 55, 526 |
| HinfI | GANTC | 2 cut(s) | 257, 509 |
| HpaII | CCGG | 1 cut(s) | 593 |
| HphI | GGTGA | 2 cut(s) | 162, 582 |
| Hpy166II | GTNNAC | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 2 cut(s) | 312, 433 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| Hpy8I | GTNNAC | 1 cut(s) | 71 |
| HpyAV | CCTTC | 4 cut(s) | 137, 177, 252, 293 |
| HpyCH4III | ACNGT | 2 cut(s) | 122, 421 |
| HpyCH4IV | ACGT | 1 cut(s) | 469 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 285, 639 |
| HpyF3I | CTNAG | 3 cut(s) | 65, 458, 726 |
| HpySE526I | ACGT | 1 cut(s) | 469 |
| Hsp92II | CATG | 6 cut(s) | 146, 152, 334, 391, 482, 627 |
| HspAI | GCGC | 2 cut(s) | 55, 526 |
| Kzo9I | GATC | 4 cut(s) | 108, 451, 472, 595 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| Lsp1109I | GCAGC | 2 cut(s) | 26, 322 |
| LweI | GCATC | 4 cut(s) | 367, 403, 472, 596 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeII | ACGT | 1 cut(s) | 469 |
| MaeIII | GTNAC | 1 cut(s) | 122 |
| MalI | GATC | 4 cut(s) | 110, 453, 474, 597 |
| MboI | GATC | 4 cut(s) | 108, 451, 472, 595 |
| MboII | GAAGA | 2 cut(s) | 434, 668 |
| MflI | RGATCY | 1 cut(s) | 595 |
| MhlI | GDGCHC | 1 cut(s) | 73 |
| MluCI | AATT | 2 cut(s) | 363, 499 |
| MnlI | CCTC | 7 cut(s) | 100, 196, 384, 401, 404, 641, 705 |
| Mph1103I | ATGCAT | 1 cut(s) | 382 |
| MseI | TTAA | 2 cut(s) | 401, 690 |
| MslI | CAYNNNNRTG | 1 cut(s) | 147 |
| MspI | CCGG | 1 cut(s) | 593 |
| MspR9I | CCNGG | 2 cut(s) | 228, 357 |
| Mva1269I | GAATGC | 1 cut(s) | 380 |
| MvaI | CCWGG | 2 cut(s) | 228, 357 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 285, 639 |
| NdeI | CATATG | 2 cut(s) | 10, 661 |
| NdeII | GATC | 4 cut(s) | 108, 451, 472, 595 |
| NlaIII | CATG | 6 cut(s) | 146, 152, 334, 391, 482, 627 |
| NlaIV | GGNNCC | 1 cut(s) | 597 |
| NmuCI | GTSAC | 1 cut(s) | 122 |
| NsbI | TGCGCA | 2 cut(s) | 56, 527 |
| NsiI | ATGCAT | 1 cut(s) | 382 |
| NspI | RCATGY | 2 cut(s) | 152, 627 |
| PaqCI | CACCTGC | 2 cut(s) | 496, 551 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PctI | GAATGC | 1 cut(s) | 380 |
| PfeI | GAWTC | 2 cut(s) | 257, 509 |
| PkrI | GCNGC | 3 cut(s) | 41, 290, 337 |
| Ppu21I | YACGTR | 1 cut(s) | 470 |
| PscI | ACATGT | 1 cut(s) | 148 |
| PshAI | GACNNNNGTC | 1 cut(s) | 670 |
| Psp6I | CCWGG | 2 cut(s) | 226, 355 |
| PspGI | CCWGG | 2 cut(s) | 226, 355 |
| PspN4I | GGNNCC | 1 cut(s) | 597 |
| PspPI | GGNCC | 1 cut(s) | 665 |
| PsuI | RGATCY | 1 cut(s) | 595 |
| RsaI | GTAC | 3 cut(s) | 225, 240, 572 |
| RsaNI | GTAC | 3 cut(s) | 224, 239, 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 147 |
| SaqAI | TTAA | 2 cut(s) | 401, 690 |
| SatI | GCNGC | 3 cut(s) | 40, 289, 336 |
| Sau3AI | GATC | 4 cut(s) | 108, 451, 472, 595 |
| Sau96I | GGNCC | 1 cut(s) | 665 |
| ScrFI | CCNGG | 2 cut(s) | 228, 357 |
| SduI | GDGCHC | 1 cut(s) | 73 |
| SfaNI | GCATC | 4 cut(s) | 367, 403, 472, 596 |
| SinI | GGWCC | 1 cut(s) | 665 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 147 |
| Sse9I | AATT | 2 cut(s) | 363, 499 |
| SsiI | CCGC | 1 cut(s) | 289 |
| SspMI | CTAG | 1 cut(s) | 252 |
| StyD4I | CCNGG | 2 cut(s) | 226, 355 |
| TaaI | ACNGT | 2 cut(s) | 122, 421 |
| TaiI | ACGT | 1 cut(s) | 472 |
| TaqI | TCGA | 1 cut(s) | 295 |
| TasI | AATT | 2 cut(s) | 363, 499 |
| TatI | WGTACW | 1 cut(s) | 570 |
| TauI | GCSGC | 1 cut(s) | 291 |
| TfiI | GAWTC | 2 cut(s) | 257, 509 |
| Tru1I | TTAA | 2 cut(s) | 401, 690 |
| Tru9I | TTAA | 2 cut(s) | 401, 690 |
| TscAI | CASTG | 3 cut(s) | 73, 528, 675 |
| TseFI | GTSAC | 1 cut(s) | 122 |
| TseI | GCWGC | 2 cut(s) | 39, 335 |
| Tsp45I | GTSAC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 1 cut(s) | 648 |
| TspGWI | ACGGA | 1 cut(s) | 437 |
| TspRI | CASTG | 3 cut(s) | 73, 528, 675 |
| VneI | GTGCAC | 1 cut(s) | 69 |
| VpaK11BI | GGWCC | 1 cut(s) | 665 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 402 |
| XceI | RCATGY | 2 cut(s) | 152, 627 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 553 |
| XspI | CTAG | 1 cut(s) | 252 |
| Zsp2I | ATGCAT | 1 cut(s) | 382 |