Rh6CG032000

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000108
Physical Location & Seq
Reverse (-)
2946323 .. 2949818
3496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG032000.1

Sequence Viewer

Length: 1245 bp
ATGGTGTCTTACGAGTACGTTCTGGGTGGAGTCTTGGCTTCTCTGCTCGGCTCTGTTTTCTTCATGATCATCACCAGCACTTTTAGCGAGAAGAAAAAGGTGGAGGATTTGAAAAGTAATAATGGGTTTGTGAGGATGCCGCAGAACGGTGCGTTTCGGCCGGAGATGGAGGAGGAGGAGGAGGAGGAGAAAAGTACCGACGTCGTCATTGTCGGCGCCGGAGTTGCCGGTGCAGCTCTTGCTTACACTCTTGCCAAGGAAGGACGCCGTGTACATGTTATTGAAAGAGACTTGAGTGAGCCAGACAGAATTGTTGGTGAGCTTTTGCAGCCTGGGGGTTATCTCAAATTGATTGAGTTGGGTCTTGAAGACTGTGCAAACGAGTCAATTGATGCTCAGAAGGTCTTTGGGTATGCTCTTTACAAAGATGGCAAGGATACAAAACTATCTTATCCCTTGGAGCAGTATAGTTCAGATGTGGCTGGGAGAAGTTTCCACAATGGGCGTTTTATTCAAAGAATGCGTGAAAAAGCTGCAACTCTTTCAAATGTCAAATTGGAACAAGGATCGGTGACAACACTAATCGAGGAAAAGGGCATTGTCAAAGGGGTGATTTACAAGAACAAGGCTGGAGAGGAGATGAGAACATATGCTCCACTAACAATCGTGTGCGATGGCTGCTTTTCAAATTTGCGTAAATCTCTCAGTGCTCCAAAGGTTGAAAGTCCCTCTTGTTTTGTTGGTTTGGTGTTAGAGAACTGTGATCTTCCCCATGCAAATCATGGACATGTGATTTTGGGAGACCCTTCACCCATCCTGTTTTATCCTATTAGTTCCACTGAGATTCGTTGTTTGGTCGATGTACCTGGGACAAAAGTACCTTCAGTTGCAAGTGGTGAAATGGCTAACTATTTGAAGACTCTGGTGGCTCCTCAGGTTCCCCCACAGCTGTACAATGCTTTTATGGTTGCAGTAGAGAAGGGAAACATTAGATCCATGCAAAACAAAAGCATGGCTGCTAATCCTGTTCCCACTCCTGGAGCAATTTTGTTGGGGGATTCATTCAACATGAGGCATCCTTTAACAGGAGGAGGAATGACTGTGGCTCTTTCAGACATAGTTCTTCTCCGCGATCTTCTTAGACCCCTACGTGATCTTAATGATGCACCTGCTTTGTGCAATTACCTTGAATCATTTTATACATTGCGTAAGGTAAAGCCCCTAGTCAAAGAACTCATAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

414

Amino Acids

45.31

Weight (kDa)

5.83

Isoelectric Point (pI)

46.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 66 - 377 9.4e-19 FAD binding domain
DAO PF01266 67 - 97 3.6e-08 FAD dependent oxidoreductase
FAD_binding_2 PF00890 67 - 96 7.7e-06 FAD binding domain
NAD_binding_8 PF13450 70 - 96 1.5e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 218 - 405 2.4e-81 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1177
AatII GACGTC 1 cut(s) 204
Acc36I ACCTGC 1 cut(s) 1177
AccB1I GGYRCC 1 cut(s) 215
AccII CGCG 1 cut(s) 1131
AciI CCGC 2 cut(s) 140, 1129
AclWI GGATC 2 cut(s) 574, 987
AcoI YGGCCR 1 cut(s) 158
AcsI RAATTY 1 cut(s) 688
AcuI CTGAAG 1 cut(s) 867
AcyI GRCGYC 3 cut(s) 201, 216, 265
AfaI GTAC 6 cut(s) 17, 196, 273, 864, 879, 953
AfiI CCNNNNNNNGG 3 cut(s) 146, 1037, 1085
AflIII ACRYGT 2 cut(s) 274, 787
AjnI CCWGG 3 cut(s) 331, 865, 1036
AloI GAACNNNNNNTCC 2 cut(s) 637, 669
AluBI AGCT 4 cut(s) 236, 322, 533, 949
AluI AGCT 4 cut(s) 236, 322, 533, 949
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 2 cut(s) 282, 795
AlwI GGATC 2 cut(s) 574, 987
AoxI GGCC 1 cut(s) 158
ApeKI GCWGC 5 cut(s) 233, 328, 533, 678, 1016
ApoI RAATTY 1 cut(s) 688
AspLEI GCGC 1 cut(s) 218
AsuHPI GGTGA 6 cut(s) 64, 329, 583, 622, 801, 908
AxyI CCTNAGG 1 cut(s) 933
BaeI ACNNNNGTAYC 2 cut(s) 861, 894
BanI GGYRCC 1 cut(s) 215
BbsI GAAGAC 2 cut(s) 375, 923
Bbv12I GWGCWC 1 cut(s) 712
BbvI GCAGC 5 cut(s) 245, 340, 520, 665, 1003
BccI CCATC 4 cut(s) 160, 422, 668, 821
BceAI ACGGC 1 cut(s) 252
BciT130I CCWGG 3 cut(s) 333, 867, 1038
BciVI GTATCC 1 cut(s) 430
BclI TGATCA 1 cut(s) 66
BcoDI GTCTC 2 cut(s) 282, 795
BfaI CTAG 1 cut(s) 1223
BfoI RGCGCY 1 cut(s) 219
BfuAI ACCTGC 1 cut(s) 1177
BfuI GTATCC 1 cut(s) 430
BisI GCNGC 6 cut(s) 140, 234, 329, 534, 679, 1017
BlsI GCNGC 6 cut(s) 141, 235, 330, 535, 680, 1018
Bme1390I CCNGG 3 cut(s) 333, 867, 1038
BmiI GGNNCC 3 cut(s) 217, 930, 939
BmrFI CCNGG 3 cut(s) 333, 867, 1038
BmsI GCATC 4 cut(s) 126, 382, 1084, 1153
BpiI GAAGAC 2 cut(s) 375, 923
BpmI CTGGAG 2 cut(s) 651, 1059
BpuEI CTTGAG 1 cut(s) 313
BsaAI YACGTR 1 cut(s) 1151
BsaHI GRCGYC 3 cut(s) 201, 216, 265
BsaI GGTCTC 1 cut(s) 795
BsaJI CCNNGG 4 cut(s) 255, 332, 456, 866
BsaXI ACNNNNNCTCC 2 cut(s) 637, 667
Bsc4I CCNNNNNNNGG 3 cut(s) 146, 1037, 1085
Bse118I RCCGGY 1 cut(s) 227
Bse21I CCTNAGG 1 cut(s) 933
Bse3DI GCAATG 1 cut(s) 1202
BseBI CCWGG 3 cut(s) 333, 867, 1038
BseDI CCNNGG 4 cut(s) 255, 332, 456, 866
BseGI GGATG 3 cut(s) 141, 813, 1075
BseLI CCNNNNNNNGG 3 cut(s) 146, 1037, 1085
BseMI GCAATG 1 cut(s) 1202
BseMII CTCAG 4 cut(s) 410, 718, 831, 947
BseRI GAGGAG 9 cut(s) 185, 188, 191, 194, 197, 200, 650, 921, 1104
BseX3I CGGCCG 1 cut(s) 158
BseXI GCAGC 5 cut(s) 245, 340, 520, 665, 1003
BseYI CCCAGC 1 cut(s) 482
BsgI GTGCAG 1 cut(s) 252
Bsh1236I CGCG 1 cut(s) 1131
Bsh1285I CGRYCG 1 cut(s) 161
BshFI GGCC 1 cut(s) 160
BshNI GGYRCC 1 cut(s) 215
BsiEI CGRYCG 1 cut(s) 161
BsiHKAI GWGCWC 1 cut(s) 712
BsiSI CCGG 3 cut(s) 161, 219, 228
BslFI GGGAC 2 cut(s) 711, 883
BslI CCNNNNNNNGG 3 cut(s) 146, 1037, 1085
BsmAI GTCTC 2 cut(s) 282, 795
BsmFI GGGAC 2 cut(s) 711, 883
BsmI GAATGC 1 cut(s) 525
BsnI GGCC 1 cut(s) 160
Bso31I GGTCTC 1 cut(s) 795
Bsp1286I GDGCHC 1 cut(s) 712
Bsp1407I TGTACA 2 cut(s) 271, 951
Bsp143I GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
BspACI CCGC 2 cut(s) 140, 1129
BspANI GGCC 1 cut(s) 160
BspCNI CTCAG 4 cut(s) 409, 717, 832, 946
BspFNI CGCG 1 cut(s) 1131
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 217, 930, 939
BspMI ACCTGC 1 cut(s) 1177
BspPI GGATC 2 cut(s) 574, 987
BspT107I GGYRCC 1 cut(s) 215
BspTNI GGTCTC 1 cut(s) 795
BsrDI GCAATG 1 cut(s) 1202
BsrFI RCCGGY 1 cut(s) 227
BsrGI TGTACA 2 cut(s) 271, 951
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 4 cut(s) 255, 332, 456, 866
BssMI GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
BssNI GRCGYC 3 cut(s) 201, 216, 265
BssT1I CCWWGG 2 cut(s) 255, 456
Bst2UI CCWGG 3 cut(s) 333, 867, 1038
Bst4CI ACNGT 4 cut(s) 149, 374, 761, 1102
BstACI GRCGYC 3 cut(s) 201, 216, 265
BstAPI GCANNNNNTGC 1 cut(s) 239
BstAUI TGTACA 2 cut(s) 271, 951
BstBAI YACGTR 1 cut(s) 1151
BstDEI CTNAG 5 cut(s) 396, 704, 840, 933, 1139
BstENI CCTNNNNNAGG 1 cut(s) 1083
BstF5I GGATG 3 cut(s) 141, 813, 1075
BstFNI CGCG 1 cut(s) 1131
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 6 cut(s) 69, 569, 766, 995, 1135, 1156
BstMAI GTCTC 2 cut(s) 282, 795
BstMBI GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
BstMCI CGRYCG 1 cut(s) 161
BstMWI GCNNNNNNNGC 6 cut(s) 84, 224, 233, 239, 328, 678
BstNI CCWGG 3 cut(s) 333, 867, 1038
BstNSI RCATGY 2 cut(s) 278, 791
BstSCI CCNGG 3 cut(s) 331, 865, 1036
BstUI CGCG 1 cut(s) 1131
BstV1I GCAGC 5 cut(s) 245, 340, 520, 665, 1003
BstV2I GAAGAC 2 cut(s) 375, 923
BstX2I RGATCY 1 cut(s) 992
BstYI RGATCY 1 cut(s) 992
BstZI CGGCCG 1 cut(s) 158
Bsu36I CCTNAGG 1 cut(s) 933
BsuI GTATCC 1 cut(s) 430
BsuRI GGCC 1 cut(s) 160
BtgZI GCGATG 1 cut(s) 687
BtsCI GGATG 3 cut(s) 141, 813, 1075
BtsIMutI CAGTG 2 cut(s) 712, 837
BveI ACCTGC 1 cut(s) 1177
CciI TCATGA 1 cut(s) 63
CfoI GCGC 1 cut(s) 218
Cfr10I RCCGGY 1 cut(s) 227
CseI GACGC 1 cut(s) 273
Csp6I GTAC 6 cut(s) 16, 195, 272, 863, 878, 952
CviAII CATG 8 cut(s) 64, 275, 773, 782, 788, 997, 1012, 1069
CviQI GTAC 6 cut(s) 16, 195, 272, 863, 878, 952
DdeI CTNAG 5 cut(s) 396, 704, 840, 933, 1139
DinI GGCGCC 1 cut(s) 217
DpnI GATC 6 cut(s) 68, 568, 765, 994, 1134, 1155
DpnII GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
EaeI YGGCCR 1 cut(s) 158
EagI CGGCCG 1 cut(s) 158
EclXI CGGCCG 1 cut(s) 158
Eco130I CCWWGG 2 cut(s) 255, 456
Eco31I GGTCTC 1 cut(s) 795
Eco52I CGGCCG 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 867
Eco81I CCTNAGG 1 cut(s) 933
EcoNI CCTNNNNNAGG 1 cut(s) 1083
EcoRII CCWGG 3 cut(s) 331, 865, 1036
EcoT14I CCWWGG 2 cut(s) 255, 456
EgeI GGCGCC 1 cut(s) 217
EheI GGCGCC 1 cut(s) 217
ErhI CCWWGG 2 cut(s) 255, 456
FaeI CATG 8 cut(s) 67, 278, 776, 785, 791, 1000, 1015, 1072
FalI AAGNNNNNCTT 2 cut(s) 715, 747
FaqI GGGAC 2 cut(s) 711, 883
FatI CATG 8 cut(s) 63, 274, 772, 781, 787, 996, 1011, 1068
FauNDI CATATG 1 cut(s) 649
FbaI TGATCA 1 cut(s) 66
Fnu4HI GCNGC 6 cut(s) 140, 234, 329, 534, 679, 1017
FokI GGATG 3 cut(s) 148, 800, 1062
Fsp4HI GCNGC 6 cut(s) 140, 234, 329, 534, 679, 1017
FspBI CTAG 1 cut(s) 1223
GlaI GCGC 1 cut(s) 217
GluI GCNGC 6 cut(s) 140, 234, 329, 534, 679, 1017
GsaI CCCAGC 1 cut(s) 486
GsuI CTGGAG 2 cut(s) 651, 1059
HaeII RGCGCY 1 cut(s) 219
HaeIII GGCC 1 cut(s) 160
HapII CCGG 3 cut(s) 161, 219, 228
HgaI GACGC 1 cut(s) 273
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 3 cut(s) 201, 216, 265
Hin1II CATG 8 cut(s) 67, 278, 776, 785, 791, 1000, 1015, 1072
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HinfI GANTC 6 cut(s) 30, 383, 844, 919, 1058, 1190
HpaII CCGG 3 cut(s) 161, 219, 228
HphI GGTGA 6 cut(s) 64, 329, 583, 622, 801, 908
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 3 cut(s) 399, 475, 1114
Hpy188III TCNNGA 2 cut(s) 64, 365
Hpy8I GTNNAC 1 cut(s) 272
Hpy99I CGWCG 2 cut(s) 203, 206
HpyAV CCTTC 5 cut(s) 254, 394, 816, 891, 973
HpyCH4III ACNGT 4 cut(s) 149, 374, 761, 1102
HpyCH4IV ACGT 3 cut(s) 18, 201, 1150
HpyF10VI GCNNNNNNNGC 6 cut(s) 84, 224, 233, 239, 328, 678
HpyF3I CTNAG 5 cut(s) 396, 704, 840, 933, 1139
HpySE526I ACGT 3 cut(s) 18, 201, 1150
Hsp92I GRCGYC 3 cut(s) 201, 216, 265
Hsp92II CATG 8 cut(s) 67, 278, 776, 785, 791, 1000, 1015, 1072
HspAI GCGC 1 cut(s) 216
KasI GGCGCC 1 cut(s) 215
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
LmnI GCTCC 5 cut(s) 460, 658, 715, 934, 1040
Lsp1109I GCAGC 5 cut(s) 245, 340, 520, 665, 1003
LweI GCATC 4 cut(s) 126, 382, 1084, 1153
MaeI CTAG 1 cut(s) 1223
MaeII ACGT 3 cut(s) 18, 201, 1150
MaeIII GTNAC 1 cut(s) 571
MalI GATC 6 cut(s) 68, 568, 765, 994, 1134, 1155
MboI GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
MboII GAAGA 7 cut(s) 52, 103, 380, 758, 928, 1115, 1127
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 992
MhlI GDGCHC 1 cut(s) 712
MluCI AATT 7 cut(s) 309, 347, 387, 554, 688, 1044, 1180
Mly113I GGCGCC 1 cut(s) 216
MlyI GAGTC 3 cut(s) 39, 392, 913
MseI TTAA 3 cut(s) 1082, 1158, 1243
MslI CAYNNNNRTG 1 cut(s) 786
MspA1I CMGCKG 1 cut(s) 949
MspI CCGG 3 cut(s) 161, 219, 228
MspR9I CCNGG 3 cut(s) 333, 867, 1038
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 525
MvaI CCWGG 3 cut(s) 333, 867, 1038
MvnI CGCG 1 cut(s) 1131
MwoI GCNNNNNNNGC 6 cut(s) 84, 224, 233, 239, 328, 678
NarI GGCGCC 1 cut(s) 216
NdeI CATATG 1 cut(s) 649
NdeII GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
NlaIII CATG 8 cut(s) 67, 278, 776, 785, 791, 1000, 1015, 1072
NlaIV GGNNCC 3 cut(s) 217, 930, 939
NmeAIII GCCGAG 1 cut(s) 27
NmuCI GTSAC 1 cut(s) 571
NspI RCATGY 2 cut(s) 278, 791
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 1 cut(s) 1177
PciI ACATGT 2 cut(s) 274, 787
PctI GAATGC 1 cut(s) 525
PfeI GAWTC 3 cut(s) 844, 1058, 1190
PflFI GACNNNGTC 1 cut(s) 203
PfoI TCCNGGA 1 cut(s) 1036
PkrI GCNGC 6 cut(s) 141, 235, 330, 535, 680, 1018
PleI GAGTC 3 cut(s) 38, 391, 913
PluTI GGCGCC 1 cut(s) 219
PpsI GAGTC 3 cut(s) 38, 391, 913
Ppu21I YACGTR 1 cut(s) 1151
PscI ACATGT 2 cut(s) 274, 787
Psp6I CCWGG 3 cut(s) 331, 865, 1036
PspFI CCCAGC 1 cut(s) 482
PspGI CCWGG 3 cut(s) 331, 865, 1036
PspN4I GGNNCC 3 cut(s) 217, 930, 939
PsuI RGATCY 1 cut(s) 992
PsyI GACNNNGTC 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 949
RsaI GTAC 6 cut(s) 17, 196, 273, 864, 879, 953
RsaNI GTAC 6 cut(s) 16, 195, 272, 863, 878, 952
RseI CAYNNNNRTG 1 cut(s) 786
SaqAI TTAA 3 cut(s) 1082, 1158, 1243
SatI GCNGC 6 cut(s) 140, 234, 329, 534, 679, 1017
Sau3AI GATC 6 cut(s) 66, 566, 763, 992, 1132, 1153
SchI GAGTC 3 cut(s) 39, 392, 913
ScrFI CCNGG 3 cut(s) 333, 867, 1038
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 4 cut(s) 126, 382, 1084, 1153
SfoI GGCGCC 1 cut(s) 217
SmiMI CAYNNNNRTG 1 cut(s) 786
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
Sse9I AATT 7 cut(s) 309, 347, 387, 554, 688, 1044, 1180
SsiI CCGC 2 cut(s) 140, 1129
SspDI GGCGCC 1 cut(s) 215
SspMI CTAG 1 cut(s) 1223
StyD4I CCNGG 3 cut(s) 331, 865, 1036
StyI CCWWGG 2 cut(s) 255, 456
TaaI ACNGT 4 cut(s) 149, 374, 761, 1102
TaiI ACGT 3 cut(s) 21, 204, 1153
TaqI TCGA 2 cut(s) 585, 858
TasI AATT 7 cut(s) 309, 347, 387, 554, 688, 1044, 1180
TatI WGTACW 2 cut(s) 271, 951
TauI GCSGC 1 cut(s) 142
TfiI GAWTC 3 cut(s) 844, 1058, 1190
Tru1I TTAA 3 cut(s) 1082, 1158, 1243
Tru9I TTAA 3 cut(s) 1082, 1158, 1243
TscAI CASTG 2 cut(s) 712, 844
TseFI GTSAC 1 cut(s) 571
TseI GCWGC 5 cut(s) 233, 328, 533, 678, 1016
Tsp45I GTSAC 1 cut(s) 571
TspDTI ATGAA 2 cut(s) 52, 1050
TspRI CASTG 2 cut(s) 712, 844
Tth111I GACNNNGTC 1 cut(s) 203
XagI CCTNNNNNAGG 1 cut(s) 1083
XapI RAATTY 1 cut(s) 688
XceI RCATGY 2 cut(s) 278, 791
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
XspI CTAG 1 cut(s) 1223
ZraI GACGTC 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.