FvH4_2g02660

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000108
Physical Location & Seq
Forward (+)
2124898 .. 2128113
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g02660.t3

Sequence Viewer

Length: 1638 bp
ATGGATTACCTTTATATAACAGGAGCAGTCATAGCTTCATTGTTAAGTGTTGTTTTCTTGTATACTTTGCCAGGGAAGAGGAAGAATGCCATAGCTTCAGTGAAGACTCAAAATGGGAAACTTTTGAAGAGCTACGGAAATGGAATGTGTCTGCCGGCAGAAATAGGTACAAGTCCTGACATTGTCATCGTTGGTGCTGGAGTTGTTGGTTCGGCACTCGCTTATACTCTTGGGAAGGATGGGCGCCGAGTGCATGTGATTGAAAGAGACTTGACTGAACCTGATAGAATTGTTGGTGAACTCCTGCAACCTGGAGGATATCTTAGTTTGATTGAGTTGGGCCTTGAAGATTGTGTGAATGAGATTGATGCTCAGAGAGTTTTTGGCTATGCACTTTACAAGGACGGGAAAAGTACCAAGCTGCCATATCCTTTGGAAGATTTCCATCCAGATGTGGCTGGGAGAAGTTTTCACCATGGCCGTTTCATTCAAAAGATGCGTGAAAAGGCCGCATCTTTTCCCAATGTAAGATTGGAGCAAGGCACAGTGACTTCTCTGCTTGAAGAAAAGGGTACTGTCAAAGGGGTCCAATACAAATCCAAAGGCAGTGATCAAGAGCTCACTGCACATGCTCCCCTCACGATAGTCTGTGATGGTTGCTATTCAAACTTGCGACGCTCTCTCTGTAATGCGAAGGTTGATATTCCTTCATGTTTCGTTGGTTTAGTTCTTGAGAATTGCCAGCTTCCATACGCAAATCATGGGCATGTGATCTTAGCAGATCCTTCACCCATATTGTTTTATCCTATCAGCAGCACCGAGATTCGCTGCCTGGTTGATGTACCAGGCCAGAAAGTACCTTCAATTTCCGCTGGTGATATGGCTCACTACTTGAAAACAAAAGTGGCACCCCAAGTTCCACTTGAACTGCATGCTGCTTTCTTGGCTGCCATTGATAAAGGAAACATAAAGTCAATGCCAAACAGAAGCATGCCTGCTGCTCCTCATCCCACCCCTGGTGCCTTTCTAATGGGTGATGCAGTCAATATGCGCCATCCTTTAACCGGAGGAGGCATGACTGTGGCTCTAGCTGACATTGTGGTTGTAAGGGATCTTCTAAACCCTCTGAACAATCTGAATGATGCATCAGCCCTTTGCAAGTACCTTGGATCGTTCTATACTCTACGTAAGCCTGTGTCTTCTACCATAAACACATTGGCAGGCGCTCTATACAAGGTATTCTGTGCATCTCCTGATCCAGCAAGGAAAGAAATGCGGGAAGCATGCTTCGACTACTTGAGCCTTGGTGGCATCTTTTCCAATGGACCTCTGGCTCTTCTCTCCGGTCTAAATCCTCACCCATTGAGCTTGATTCTCCACTTCTTTTCTGTGGCTATCTACGCTGTTGGCCGGCTGTTACTTCCATTCCCTTCACCCAAACGCATGTGGATTGGAACTAGATTGATTATGGGCGCATCGGGTATCATTTTCCCAATAATCAGCGCTGAAGGAGTAAGACAAATGTTCTTCCCTGTAATGGTTCCATCCTATCACAGAGCTCCTCCAGTTCATTTAAATGATGTTGATGATAAACAAGAAAAAGCAATTTATGGCATGGAGCAACTTTCAACATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

546

Amino Acids

59.1

Weight (kDa)

8.49

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 60 - 369 2.6e-17 FAD binding domain
DAO PF01266 60 - 90 3.3e-06 FAD dependent oxidoreductase
SE PF08491 210 - 483 4.8e-117 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 243, 907, 1019
AccI GTMKAC 1 cut(s) 62
AciI CCGC 3 cut(s) 510, 870, 1276
AclWI GGATC 4 cut(s) 776, 1119, 1177, 1250
AcoI YGGCCR 2 cut(s) 478, 1408
AcuI CTGAAG 2 cut(s) 81, 1527
AcyI GRCGYC 1 cut(s) 244
AfaI GTAC 6 cut(s) 169, 415, 574, 843, 858, 1163
AfeI AGCGCT 1 cut(s) 1504
AfiI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
AjnI CCWGG 5 cut(s) 70, 310, 831, 844, 1015
AluBI AGCT 9 cut(s) 35, 95, 132, 421, 619, 745, 1091, 1368, 1559
AluI AGCT 9 cut(s) 35, 95, 132, 421, 619, 745, 1091, 1368, 1559
Alw21I GWGCWC 2 cut(s) 621, 1561
Alw26I GTCTC 1 cut(s) 261
AlwI GGATC 4 cut(s) 776, 1119, 1177, 1250
Aor51HI AGCGCT 1 cut(s) 1504
AoxI GGCC 5 cut(s) 340, 478, 507, 847, 1408
ApeKI GCWGC 6 cut(s) 421, 813, 828, 935, 947, 998
AspLEI GCGC 5 cut(s) 246, 1053, 1226, 1475, 1505
AspS9I GGNCC 3 cut(s) 340, 586, 1325
AsuHPI GGTGA 7 cut(s) 308, 464, 780, 887, 1046, 1349, 1425
AvaII GGWCC 2 cut(s) 586, 1325
BanI GGYRCC 3 cut(s) 243, 907, 1019
BanII GRGCYC 2 cut(s) 621, 1561
BarI GAAGNNNNNNTAC 2 cut(s) 1098, 1130
BbsI GAAGAC 2 cut(s) 110, 1191
Bbv12I GWGCWC 2 cut(s) 621, 1561
BbvI GCAGC 6 cut(s) 408, 815, 825, 922, 934, 985
BccI CCATC 5 cut(s) 233, 453, 647, 1062, 1552
BceAI ACGGC 1 cut(s) 465
BciT130I CCWGG 5 cut(s) 72, 312, 833, 846, 1017
BclI TGATCA 1 cut(s) 610
BcoDI GTCTC 1 cut(s) 261
BfaI CTAG 2 cut(s) 1088, 1458
BfoI RGCGCY 3 cut(s) 247, 1227, 1506
BglI GCCNNNNNGGC 1 cut(s) 1308
BisI GCNGC 7 cut(s) 422, 510, 814, 829, 936, 948, 999
BlsI GCNGC 7 cut(s) 423, 511, 815, 830, 937, 949, 1000
Bme1390I CCNGG 5 cut(s) 72, 312, 833, 846, 1017
Bme18I GGWCC 2 cut(s) 586, 1325
BmgT120I GGNCC 3 cut(s) 340, 586, 1325
BmiI GGNNCC 5 cut(s) 245, 587, 909, 1021, 1542
BmrFI CCNGG 5 cut(s) 72, 312, 833, 846, 1017
BmsI GCATC 9 cut(s) 358, 486, 521, 1027, 1132, 1154, 1256, 1320, 1484
BpiI GAAGAC 2 cut(s) 110, 1191
BpmI CTGGAG 3 cut(s) 219, 333, 1548
BpuEI CTTGAG 2 cut(s) 752, 1318
BsaAI YACGTR 1 cut(s) 1187
BsaBI GATNNNNATC 1 cut(s) 444
BsaHI GRCGYC 1 cut(s) 244
BsaJI CCNNGG 5 cut(s) 71, 475, 1015, 1165, 1303
BsaWI WCCGGW 2 cut(s) 1064, 1343
Bsc4I CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
Bse118I RCCGGY 2 cut(s) 154, 1410
Bse1I ACTGG 1 cut(s) 1565
Bse8I GATNNNNATC 1 cut(s) 444
BseBI CCWGG 5 cut(s) 72, 312, 833, 846, 1017
BseDI CCNNGG 5 cut(s) 71, 475, 1015, 1165, 1303
BseGI GGATG 5 cut(s) 244, 445, 1006, 1054, 1544
BseJI GATNNNNATC 1 cut(s) 444
BseLI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
BseMII CTCAG 1 cut(s) 386
BseNI ACTGG 1 cut(s) 1565
BseRI GAGGAG 3 cut(s) 993, 1083, 1551
BseXI GCAGC 6 cut(s) 408, 815, 825, 922, 934, 985
BseYI CCCAGC 1 cut(s) 458
BsgI GTGCAG 1 cut(s) 609
BshFI GGCC 5 cut(s) 342, 480, 509, 849, 1410
BshNI GGYRCC 3 cut(s) 243, 907, 1019
BsiHKAI GWGCWC 2 cut(s) 621, 1561
BsiSI CCGG 4 cut(s) 155, 1065, 1344, 1411
BslI CCNNNNNNNGG 3 cut(s) 1016, 1064, 1537
BsmAI GTCTC 1 cut(s) 261
BsmI GAATGC 1 cut(s) 91
BsnI GGCC 5 cut(s) 342, 480, 509, 849, 1410
Bsp1286I GDGCHC 2 cut(s) 621, 1561
Bsp143I GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
Bsp19I CCATGG 1 cut(s) 475
BspACI CCGC 3 cut(s) 510, 870, 1276
BspANI GGCC 5 cut(s) 342, 480, 509, 849, 1410
BspCNI CTCAG 1 cut(s) 385
BspLI GGNNCC 5 cut(s) 245, 587, 909, 1021, 1542
BspPI GGATC 4 cut(s) 776, 1119, 1177, 1250
BspQI GCTCTTC 2 cut(s) 122, 1341
BspT107I GGYRCC 3 cut(s) 243, 907, 1019
BsrFI RCCGGY 2 cut(s) 154, 1410
BsrI ACTGG 1 cut(s) 1565
BssAI RCCGGY 2 cut(s) 154, 1410
BssECI CCNNGG 5 cut(s) 71, 475, 1015, 1165, 1303
BssMI GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
BssNAI GTATAC 1 cut(s) 63
BssNI GRCGYC 1 cut(s) 244
BssT1I CCWWGG 3 cut(s) 475, 1165, 1303
Bst1107I GTATAC 1 cut(s) 63
Bst2UI CCWGG 5 cut(s) 72, 312, 833, 846, 1017
Bst4CI ACNGT 3 cut(s) 547, 577, 1081
Bst6I CTCTTC 3 cut(s) 71, 122, 1341
BstACI GRCGYC 1 cut(s) 244
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 8 cut(s) 156, 743, 933, 992, 996, 1222, 1285, 1412
BstDEI CTNAG 3 cut(s) 323, 372, 775
BstDSI CCRYGG 1 cut(s) 475
BstF5I GGATG 5 cut(s) 244, 445, 1006, 1054, 1544
BstH2I RGCGCY 3 cut(s) 247, 1227, 1506
BstHHI GCGC 5 cut(s) 246, 1053, 1226, 1475, 1505
BstKTI GATC 6 cut(s) 613, 774, 784, 1114, 1172, 1258
BstMAI GTCTC 1 cut(s) 261
BstMBI GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
BstMWI GCNNNNNNNGC 5 cut(s) 32, 250, 944, 1308, 1400
BstNI CCWGG 5 cut(s) 72, 312, 833, 846, 1017
BstNSI RCATGY 7 cut(s) 257, 632, 770, 935, 994, 1287, 1447
BstSCI CCNGG 5 cut(s) 70, 310, 831, 844, 1015
BstSNI TACGTA 1 cut(s) 1187
BstV1I GCAGC 6 cut(s) 408, 815, 825, 922, 934, 985
BstV2I GAAGAC 2 cut(s) 110, 1191
BstX2I RGATCY 2 cut(s) 781, 1111
BstYI RGATCY 2 cut(s) 781, 1111
BstZ17I GTATAC 1 cut(s) 63
BsuRI GGCC 5 cut(s) 342, 480, 509, 849, 1410
BtgI CCRYGG 1 cut(s) 475
BtsCI GGATG 5 cut(s) 244, 445, 1006, 1054, 1544
BtsI GCAGTG 2 cut(s) 613, 621
BtsIMutI CAGTG 4 cut(s) 105, 552, 613, 621
Cac8I GCNNGC 8 cut(s) 156, 743, 933, 992, 996, 1222, 1285, 1412
CfoI GCGC 5 cut(s) 246, 1053, 1226, 1475, 1505
Cfr10I RCCGGY 2 cut(s) 154, 1410
Cfr13I GGNCC 3 cut(s) 340, 586, 1325
CseI GACGC 1 cut(s) 684
Csp6I GTAC 6 cut(s) 168, 414, 573, 842, 857, 1162
CviQI GTAC 6 cut(s) 168, 414, 573, 842, 857, 1162
DdeI CTNAG 3 cut(s) 323, 372, 775
DinI GGCGCC 1 cut(s) 245
DpnI GATC 6 cut(s) 612, 773, 783, 1113, 1171, 1257
DpnII GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
DraI TTTAAA 1 cut(s) 1575
EaeI YGGCCR 2 cut(s) 478, 1408
Eam1104I CTCTTC 3 cut(s) 71, 122, 1341
EarI CTCTTC 3 cut(s) 71, 122, 1341
Ecl136II GAGCTC 2 cut(s) 619, 1559
Eco105I TACGTA 1 cut(s) 1187
Eco130I CCWWGG 3 cut(s) 475, 1165, 1303
Eco24I GRGCYC 2 cut(s) 621, 1561
Eco32I GATATC 1 cut(s) 320
Eco47I GGWCC 2 cut(s) 586, 1325
Eco47III AGCGCT 1 cut(s) 1504
Eco53kI GAGCTC 2 cut(s) 619, 1559
Eco57I CTGAAG 2 cut(s) 81, 1527
EcoICRI GAGCTC 2 cut(s) 619, 1559
EcoRII CCWGG 5 cut(s) 70, 310, 831, 844, 1015
EcoRV GATATC 1 cut(s) 320
EcoT14I CCWWGG 3 cut(s) 475, 1165, 1303
EcoT22I ATGCAT 1 cut(s) 1147
EcoT38I GRGCYC 2 cut(s) 621, 1561
EgeI GGCGCC 1 cut(s) 245
EheI GGCGCC 1 cut(s) 245
ErhI CCWWGG 3 cut(s) 475, 1165, 1303
FalI AAGNNNNNCTT 2 cut(s) 906, 938
FauI CCCGC 1 cut(s) 1269
FbaI TGATCA 1 cut(s) 610
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 7 cut(s) 422, 510, 814, 829, 936, 948, 999
FokI GGATG 5 cut(s) 251, 432, 993, 1041, 1531
FriOI GRGCYC 2 cut(s) 621, 1561
Fsp4HI GCNGC 7 cut(s) 422, 510, 814, 829, 936, 948, 999
FspBI CTAG 2 cut(s) 1088, 1458
GlaI GCGC 5 cut(s) 245, 1052, 1225, 1474, 1504
GluI GCNGC 7 cut(s) 422, 510, 814, 829, 936, 948, 999
GsaI CCCAGC 1 cut(s) 462
GsuI CTGGAG 3 cut(s) 219, 333, 1548
HaeII RGCGCY 3 cut(s) 247, 1227, 1506
HaeIII GGCC 5 cut(s) 342, 480, 509, 849, 1410
HapII CCGG 4 cut(s) 155, 1065, 1344, 1411
HgaI GACGC 1 cut(s) 684
HhaI GCGC 5 cut(s) 246, 1053, 1226, 1475, 1505
Hin1I GRCGYC 1 cut(s) 244
Hin6I GCGC 5 cut(s) 244, 1051, 1224, 1473, 1503
HinP1I GCGC 5 cut(s) 244, 1051, 1224, 1473, 1503
HinfI GANTC 3 cut(s) 106, 823, 1372
HpaII CCGG 4 cut(s) 155, 1065, 1344, 1411
HphI GGTGA 7 cut(s) 308, 464, 780, 887, 1046, 1349, 1425
Hpy166II GTNNAC 2 cut(s) 63, 299
Hpy188I TCNGA 3 cut(s) 375, 1128, 1137
Hpy188III TCNNGA 6 cut(s) 176, 449, 614, 640, 731, 1253
Hpy8I GTNNAC 2 cut(s) 63, 299
Hpy99I CGWCG 1 cut(s) 678
HpyAV CCTTC 7 cut(s) 229, 688, 717, 795, 870, 1440, 1502
HpyCH4III ACNGT 3 cut(s) 547, 577, 1081
HpyCH4IV ACGT 1 cut(s) 1186
HpyCH4V TGCA 9 cut(s) 253, 307, 392, 626, 931, 1040, 1145, 1158, 1247
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 250, 944, 1308, 1400
HpyF3I CTNAG 3 cut(s) 323, 372, 775
HpySE526I ACGT 1 cut(s) 1186
Hsp92I GRCGYC 1 cut(s) 244
HspAI GCGC 5 cut(s) 244, 1051, 1224, 1473, 1503
KasI GGCGCC 1 cut(s) 243
KroI GCCGGC 2 cut(s) 154, 1410
KroNI GCCGGC 2 cut(s) 156, 1412
Ksp22I TGATCA 1 cut(s) 610
Kzo9I GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
LguI GCTCTTC 2 cut(s) 122, 1341
LmnI GCTCC 6 cut(s) 23, 535, 637, 1006, 1564, 1618
Lsp1109I GCAGC 6 cut(s) 408, 815, 825, 922, 934, 985
LweI GCATC 9 cut(s) 358, 486, 521, 1027, 1132, 1154, 1256, 1320, 1484
MaeI CTAG 2 cut(s) 1088, 1458
MaeII ACGT 1 cut(s) 1186
MaeIII GTNAC 2 cut(s) 547, 1416
MalI GATC 6 cut(s) 612, 773, 783, 1113, 1171, 1257
MboI GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
MflI RGATCY 2 cut(s) 781, 1111
MhlI GDGCHC 2 cut(s) 621, 1561
MluCI AATT 4 cut(s) 288, 736, 864, 1605
Mly113I GGCGCC 1 cut(s) 244
MlyI GAGTC 1 cut(s) 100
Mph1103I ATGCAT 1 cut(s) 1147
MroNI GCCGGC 2 cut(s) 154, 1410
MseI TTAA 3 cut(s) 44, 1061, 1574
MslI CAYNNNNRTG 4 cut(s) 450, 765, 1079, 1575
MspA1I CMGCKG 1 cut(s) 872
MspI CCGG 4 cut(s) 155, 1065, 1344, 1411
MspR9I CCNGG 5 cut(s) 72, 312, 833, 846, 1017
Mva1269I GAATGC 1 cut(s) 91
MvaI CCWGG 5 cut(s) 72, 312, 833, 846, 1017
MwoI GCNNNNNNNGC 5 cut(s) 32, 250, 944, 1308, 1400
NaeI GCCGGC 2 cut(s) 156, 1412
NarI GGCGCC 1 cut(s) 244
NcoI CCATGG 1 cut(s) 475
NdeII GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
NgoMIV GCCGGC 2 cut(s) 154, 1410
NlaIV GGNNCC 5 cut(s) 245, 587, 909, 1021, 1542
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 1 cut(s) 547
NsiI ATGCAT 1 cut(s) 1147
NspI RCATGY 7 cut(s) 257, 632, 770, 935, 994, 1287, 1447
PaeI GCATGC 3 cut(s) 935, 994, 1287
PciSI GCTCTTC 2 cut(s) 122, 1341
PctI GAATGC 1 cut(s) 91
PdiI GCCGGC 2 cut(s) 156, 1412
PfeI GAWTC 2 cut(s) 823, 1372
PflFI GACNNNGTC 1 cut(s) 182
PkrI GCNGC 7 cut(s) 423, 511, 815, 830, 937, 949, 1000
PleI GAGTC 1 cut(s) 100
PluTI GGCGCC 1 cut(s) 247
PpsI GAGTC 1 cut(s) 100
Ppu21I YACGTR 1 cut(s) 1187
Psp124BI GAGCTC 2 cut(s) 621, 1561
Psp6I CCWGG 5 cut(s) 70, 310, 831, 844, 1015
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 5 cut(s) 70, 310, 831, 844, 1015
PspN4I GGNNCC 5 cut(s) 245, 587, 909, 1021, 1542
PspPI GGNCC 3 cut(s) 340, 586, 1325
PsuI RGATCY 2 cut(s) 781, 1111
PsyI GACNNNGTC 1 cut(s) 182
RsaI GTAC 6 cut(s) 169, 415, 574, 843, 858, 1163
RsaNI GTAC 6 cut(s) 168, 414, 573, 842, 857, 1162
RseI CAYNNNNRTG 4 cut(s) 450, 765, 1079, 1575
SacI GAGCTC 2 cut(s) 621, 1561
SapI GCTCTTC 2 cut(s) 122, 1341
SaqAI TTAA 3 cut(s) 44, 1061, 1574
SatI GCNGC 7 cut(s) 422, 510, 814, 829, 936, 948, 999
Sau3AI GATC 6 cut(s) 610, 771, 781, 1111, 1169, 1255
Sau96I GGNCC 3 cut(s) 340, 586, 1325
SchI GAGTC 1 cut(s) 100
ScrFI CCNGG 5 cut(s) 72, 312, 833, 846, 1017
SduI GDGCHC 2 cut(s) 621, 1561
SfaNI GCATC 9 cut(s) 358, 486, 521, 1027, 1132, 1154, 1256, 1320, 1484
SfoI GGCGCC 1 cut(s) 245
SinI GGWCC 2 cut(s) 586, 1325
SmiI ATTTAAAT 1 cut(s) 1575
SmiMI CAYNNNNRTG 4 cut(s) 450, 765, 1079, 1575
SmlI CTYRAG 2 cut(s) 731, 1297
SmoI CTYRAG 2 cut(s) 731, 1297
SnaBI TACGTA 1 cut(s) 1187
SphI GCATGC 3 cut(s) 935, 994, 1287
Sse9I AATT 4 cut(s) 288, 736, 864, 1605
SsiI CCGC 3 cut(s) 510, 870, 1276
SspDI GGCGCC 1 cut(s) 243
SspMI CTAG 2 cut(s) 1088, 1458
SstI GAGCTC 2 cut(s) 621, 1561
StyD4I CCNGG 5 cut(s) 70, 310, 831, 844, 1015
StyI CCWWGG 3 cut(s) 475, 1165, 1303
SwaI ATTTAAAT 1 cut(s) 1575
TaaI ACNGT 3 cut(s) 547, 577, 1081
TaiI ACGT 1 cut(s) 1189
TaqI TCGA 1 cut(s) 1290
TasI AATT 4 cut(s) 288, 736, 864, 1605
TauI GCSGC 1 cut(s) 512
TfiI GAWTC 2 cut(s) 823, 1372
Tru1I TTAA 3 cut(s) 44, 1061, 1574
Tru9I TTAA 3 cut(s) 44, 1061, 1574
TscAI CASTG 4 cut(s) 105, 552, 613, 628
TseFI GTSAC 1 cut(s) 547
TseI GCWGC 6 cut(s) 421, 813, 828, 935, 947, 998
Tsp45I GTSAC 1 cut(s) 547
TspDTI ATGAA 4 cut(s) 27, 475, 699, 1559
TspGWI ACGGA 1 cut(s) 150
TspRI CASTG 4 cut(s) 105, 552, 613, 628
Tth111I GACNNNGTC 1 cut(s) 182
VpaK11BI GGWCC 2 cut(s) 586, 1325
XceI RCATGY 7 cut(s) 257, 632, 770, 935, 994, 1287, 1447
XcmI CCANNNNNNNNNTGG 3 cut(s) 529, 1213, 1327
XmiI GTMKAC 1 cut(s) 62
XspI CTAG 2 cut(s) 1088, 1458
Zsp2I ATGCAT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.