Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004830.1

Orthogroup ID

OG0000108

Physical Location & Seq

Genomic Coordinates Forward (+)

28592 .. 31779

Gene Structure 3188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004830.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

atgatggcgacaatggtggcgatcgatccgtatgttgtgtggacgttctttgcttctttattgggttttcttcttctctcccttctccgccgacgtaattacggtaatgccaccgccgaggacaagggaatggttaaaaacaagaacaagacgaccgagaatcatgtttctgaagaatgtgtgaagagctccggcaacggagacttccgacaggagttcggctccggaactgacgtcatcatcgttggcgctggtgttgctggcgctgctcttgcacacacccttggcaaggagggaagacttgttcgtgtgattgaaagagacttgacagagccggatcgaattgttggcgaacttctccagcctgggggatacctgaagctgattgacttgggacttgaagattgtgttgaggaaatcgatgctcaacgagttctcggatatgctctttttaaggatgggaagaatactacactgtcctatcccctggaacagttccactcggatgtggcgggtagaagttttcacaatgggcgattcatacagaggatgagagaaaaagctgctactcttcccaatgtacaactggagcaaggtacagtcacatccctgcttgaagaaaatgggacaattacaggggttcagtacaaaactaaggatggtcaagaacttcaagctcatgctcctcttacaattgtctgcgatggttgcttctcaaatctgcgacgcactctttgtaagcctcaggtagaagtgccctcttgttttgtgggattaattttggaaaattgtgaactcccatttgcaaatcacgggcatgttattcttgctgatccatctccaatcctgttttaccaaatcagtagtacagaggtccgctgtttagttgatgtgcctggccagaaagtacctcccatcactaatggagcaatggctaactatttgaagaatgtggtagctccacagcttccacctgaacttcacgatcccttcatatctgcaattgacaaaggaagtattagaactatgccgaatagaagcatgccagccaatccgcagccaactcctggagcccttttaatgggtgatgctttcaatatgcgtcatcctttaactggtggaggaatgactgtggcactatcggacattgttatactcagggatcttcttaaaccattacgtgacataaatgatgcttcttcattgtgcaactacctagaatccttttataccttgcgcaagccagttgcatctacaataaacaccttggcaggtgccctatacaaggtgttctctgcctcccctgaccaagcaaggaaggagatgcgccaagcatgctttgactatctgagccttggaggtgcctgttcaactggaccagtggctctgctctctggtctaaatcctcgcccgctgagtttagttctccatttttttgctgttgcgatatatggtgttggacgtttgcttctaccatttccttcaccgaaacgcatgtggattggagtgagattaatctggagcgcagtaggcataatatttcccatcatcaaggcagaaggtgtgagacagatgttctttcctgctactattccagcttgtcatagggctcctcctgctaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0004506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009611 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0012505 GO:0016125 GO:0016126 GO:0016491 GO:0016705 GO:0016709 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

541

Amino Acids

58.99

Weight (kDa)

7.93

Isoelectric Point (pI)

43.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22830 AT4G37760
fragaria_vesca	FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica	MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica	Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis	pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis	RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata	RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora	Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii	Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa	Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha	Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana	Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1262
AatII	GACGTC	1 cut(s)	237
Acc16I	TGCGCA	1 cut(s)	1238
Acc36I	ACCTGC	1 cut(s)	1262
AccB1I	GGYRCC	2 cut(s)	1274, 1361
AccB7I	CCANNNNNTGG	1 cut(s)	1067
AccIII	TCCGGA	1 cut(s)	224
AciI	CCGC	6 cut(s)	88, 114, 512, 877, 1055, 1412
AclWI	GGATC	5 cut(s)	20, 345, 827, 980, 1170
AcoI	YGGCCR	1 cut(s)	898
AcuI	CTGAAG	2 cut(s)	192, 398
AcyI	GRCGYC	1 cut(s)	234
AfaI	GTAC	5 cut(s)	582, 598, 647, 868, 909
AfiI	CCNNNNNNNGG	6 cut(s)	289, 367, 1067, 1081, 1115, 1285
AgsI	TTSAA	7 cut(s)	317, 401, 617, 674, 946, 1096, 1371
AjnI	CCWGG	4 cut(s)	364, 486, 895, 1066
AloI	GAACNNNNNNTCC	2 cut(s)	288, 320
AluBI	AGCT	7 cut(s)	189, 382, 563, 677, 959, 967, 1598
AluI	AGCT	7 cut(s)	189, 382, 563, 677, 959, 967, 1598
Alw21I	GWGCWC	1 cut(s)	191
Alw26I	GTCTC	3 cut(s)	195, 315, 1561
AlwI	GGATC	5 cut(s)	20, 345, 827, 980, 1170
Aor13HI	TCCGGA	1 cut(s)	224
AoxI	GGCC	1 cut(s)	898
ApeKI	GCWGC	3 cut(s)	266, 563, 1057
ArsI	GACNNNNNNTTYG	2 cut(s)	717, 749
AseI	ATTAAT	2 cut(s)	776, 1514
AspLEI	GCGC	5 cut(s)	251, 266, 1239, 1329, 1526
AspS9I	GGNCC	2 cut(s)	874, 1376
AsuHPI	GGTGA	2 cut(s)	1097, 1476
AvaII	GGWCC	2 cut(s)	874, 1376
AxyI	CCTNAGG	1 cut(s)	744
BaeGI	GKGCMC	2 cut(s)	759, 1279
BalI	TGGCCA	1 cut(s)	900
BanI	GGYRCC	2 cut(s)	1274, 1361
BanII	GRGCYC	3 cut(s)	191, 1075, 1612
BbsI	GAAGAC	1 cut(s)	304
Bbv12I	GWGCWC	1 cut(s)	191
BbvI	GCAGC	3 cut(s)	253, 550, 1069
BccI	CCATC	6 cut(s)	452, 653, 698, 844, 923, 1553
BciT130I	CCWGG	4 cut(s)	366, 488, 897, 1068
BciVI	GTATCC	1 cut(s)	365
BcoDI	GTCTC	3 cut(s)	195, 315, 1561
BfaI	CTAG	1 cut(s)	1217
BfoI	RGCGCY	2 cut(s)	252, 267
BfuAI	ACCTGC	1 cut(s)	1262
BfuI	GTATCC	1 cut(s)	365
BisI	GCNGC	3 cut(s)	267, 564, 1058
BlsI	GCNGC	3 cut(s)	268, 565, 1059
Bme1390I	CCNGG	4 cut(s)	366, 488, 897, 1068
Bme18I	GGWCC	2 cut(s)	874, 1376
BmgT120I	GGNCC	2 cut(s)	874, 1376
BmiI	GGNNCC	5 cut(s)	223, 1072, 1276, 1363, 1611
BmrFI	CCNGG	4 cut(s)	366, 488, 897, 1068
BmsI	GCATC	5 cut(s)	412, 1078, 1183, 1259, 1314
BpiI	GAAGAC	1 cut(s)	304
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	4 cut(s)	344, 608, 1089, 1540
Bsa29I	ATCGAT	2 cut(s)	24, 420
BsaAI	YACGTR	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	234
BsaJI	CCNNGG	6 cut(s)	117, 283, 365, 486, 1266, 1354
BsaWI	WCCGGW	1 cut(s)	224
Bsc4I	CCNNNNNNNGG	6 cut(s)	289, 367, 1067, 1081, 1115, 1285
Bse1I	ACTGG	5 cut(s)	591, 1120, 1244, 1378, 1379
Bse21I	CCTNAGG	1 cut(s)	744
Bse3DI	GCAATG	1 cut(s)	936
BseAI	TCCGGA	1 cut(s)	224
BseBI	CCWGG	4 cut(s)	366, 488, 897, 1068
BseCI	ATCGAT	2 cut(s)	24, 420
BseDI	CCNNGG	6 cut(s)	117, 283, 365, 486, 1266, 1354
BseGI	GGATG	6 cut(s)	463, 511, 555, 605, 664, 1105
BseLI	CCNNNNNNNGG	6 cut(s)	289, 367, 1067, 1081, 1115, 1285
BseMI	GCAATG	1 cut(s)	936
BseMII	CTCAG	4 cut(s)	758, 1171, 1340, 1406
BseNI	ACTGG	5 cut(s)	591, 1120, 1244, 1378, 1379
BseRI	GAGGAG	2 cut(s)	675, 1602
BseSI	GKGCMC	2 cut(s)	759, 1279
BseXI	GCAGC	3 cut(s)	253, 550, 1069
Bsh1285I	CGRYCG	2 cut(s)	24, 156
BshFI	GGCC	1 cut(s)	900
BshNI	GGYRCC	2 cut(s)	1274, 1361
BshVI	ATCGAT	2 cut(s)	24, 420
BsiEI	CGRYCG	2 cut(s)	24, 156
BsiHKAI	GWGCWC	1 cut(s)	191
BsiSI	CCGG	3 cut(s)	192, 225, 335
BslFI	GGGAC	2 cut(s)	408, 640
BslI	CCNNNNNNNGG	6 cut(s)	289, 367, 1067, 1081, 1115, 1285
BsmAI	GTCTC	3 cut(s)	195, 315, 1561
BsmFI	GGGAC	2 cut(s)	408, 640
BsnI	GGCC	1 cut(s)	900
Bsp1286I	GDGCHC	5 cut(s)	191, 759, 1075, 1279, 1612
Bsp13I	TCCGGA	1 cut(s)	224
Bsp1407I	TGTACA	1 cut(s)	580
Bsp143I	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
BspACI	CCGC	6 cut(s)	88, 114, 512, 877, 1055, 1412
BspANI	GGCC	1 cut(s)	900
BspCNI	CTCAG	4 cut(s)	757, 1170, 1341, 1407
BspDI	ATCGAT	2 cut(s)	24, 420
BspEI	TCCGGA	1 cut(s)	224
BspLI	GGNNCC	5 cut(s)	223, 1072, 1276, 1363, 1611
BspMI	ACCTGC	1 cut(s)	1262
BspPI	GGATC	5 cut(s)	20, 345, 827, 980, 1170
BspQI	GCTCTTC	1 cut(s)	179
BspT107I	GGYRCC	2 cut(s)	1274, 1361
BsrDI	GCAATG	1 cut(s)	936
BsrGI	TGTACA	1 cut(s)	580
BsrI	ACTGG	5 cut(s)	591, 1120, 1244, 1378, 1379
BssECI	CCNNGG	6 cut(s)	117, 283, 365, 486, 1266, 1354
BssMI	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	3 cut(s)	283, 1266, 1354
Bst2UI	CCWGG	4 cut(s)	366, 488, 897, 1068
Bst4CI	ACNGT	5 cut(s)	104, 477, 495, 601, 1132
Bst6I	CTCTTC	2 cut(s)	179, 576
BstACI	GRCGYC	1 cut(s)	234
BstAUI	TGTACA	1 cut(s)	580
BstBAI	YACGTR	1 cut(s)	1181
BstC8I	GCNNGC	6 cut(s)	262, 1043, 1047, 1241, 1336, 1412
BstDEI	CTNAG	5 cut(s)	654, 744, 1157, 1349, 1415
BstENI	CCTNNNNNAGG	2 cut(s)	287, 1283
BstF5I	GGATG	6 cut(s)	463, 511, 555, 605, 664, 1105
BstH2I	RGCGCY	2 cut(s)	252, 267
BstHHI	GCGC	5 cut(s)	251, 266, 1239, 1329, 1526
BstKTI	GATC	6 cut(s)	24, 28, 340, 835, 988, 1165
BstMAI	GTCTC	3 cut(s)	195, 315, 1561
BstMBI	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
BstMCI	CGRYCG	2 cut(s)	24, 156
BstMWI	GCNNNNNNNGC	7 cut(s)	257, 266, 272, 708, 1335, 1530, 1616
BstNI	CCWGG	4 cut(s)	366, 488, 897, 1068
BstNSI	RCATGY	4 cut(s)	821, 1045, 1338, 1498
BstSCI	CCNGG	4 cut(s)	364, 486, 895, 1066
BstSLI	GKGCMC	2 cut(s)	759, 1279
BstV1I	GCAGC	3 cut(s)	253, 550, 1069
BstV2I	GAAGAC	1 cut(s)	304
BstX2I	RGATCY	1 cut(s)	1162
BstYI	RGATCY	1 cut(s)	1162
Bsu15I	ATCGAT	2 cut(s)	24, 420
Bsu36I	CCTNAGG	1 cut(s)	744
BsuI	GTATCC	1 cut(s)	365
BsuRI	GGCC	1 cut(s)	900
BsuTUI	ATCGAT	2 cut(s)	24, 420
BtgZI	GCGATG	1 cut(s)	717
BtsCI	GGATG	6 cut(s)	463, 511, 555, 605, 664, 1105
BtsIMutI	CAGTG	2 cut(s)	473, 1386
BveI	ACCTGC	1 cut(s)	1262
Cac8I	GCNNGC	6 cut(s)	262, 1043, 1047, 1241, 1336, 1412
CfoI	GCGC	5 cut(s)	251, 266, 1239, 1329, 1526
Cfr13I	GGNCC	2 cut(s)	874, 1376
ClaI	ATCGAT	2 cut(s)	24, 420
CseI	GACGC	2 cut(s)	735, 1091
Csp6I	GTAC	5 cut(s)	581, 597, 646, 867, 908
CviAII	CATG	6 cut(s)	164, 680, 818, 1042, 1335, 1495
CviQI	GTAC	5 cut(s)	581, 597, 646, 867, 908
DdeI	CTNAG	5 cut(s)	654, 744, 1157, 1349, 1415
DpnI	GATC	6 cut(s)	23, 27, 339, 834, 987, 1164
DpnII	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
EaeI	YGGCCR	1 cut(s)	898
Eam1104I	CTCTTC	2 cut(s)	179, 576
EarI	CTCTTC	2 cut(s)	179, 576
EciI	GGCGGA	1 cut(s)	77
Ecl136II	GAGCTC	1 cut(s)	189
Eco130I	CCWWGG	3 cut(s)	283, 1266, 1354
Eco24I	GRGCYC	3 cut(s)	191, 1075, 1612
Eco47I	GGWCC	2 cut(s)	874, 1376
Eco53kI	GAGCTC	1 cut(s)	189
Eco57I	CTGAAG	2 cut(s)	192, 398
Eco81I	CCTNAGG	1 cut(s)	744
EcoICRI	GAGCTC	1 cut(s)	189
EcoNI	CCTNNNNNAGG	2 cut(s)	287, 1283
EcoRII	CCWGG	4 cut(s)	364, 486, 895, 1066
EcoT14I	CCWWGG	3 cut(s)	283, 1266, 1354
EcoT38I	GRGCYC	3 cut(s)	191, 1075, 1612
ErhI	CCWWGG	3 cut(s)	283, 1266, 1354
FaeI	CATG	6 cut(s)	167, 683, 821, 1045, 1338, 1498
FaqI	GGGAC	2 cut(s)	408, 640
FatI	CATG	6 cut(s)	163, 679, 817, 1041, 1334, 1494
FauI	CCCGC	2 cut(s)	505, 1419
Fnu4HI	GCNGC	3 cut(s)	267, 564, 1058
FokI	GGATG	6 cut(s)	470, 518, 562, 592, 671, 1092
FriOI	GRGCYC	3 cut(s)	191, 1075, 1612
Fsp4HI	GCNGC	3 cut(s)	267, 564, 1058
FspBI	CTAG	1 cut(s)	1217
FspI	TGCGCA	1 cut(s)	1238
GlaI	GCGC	5 cut(s)	250, 265, 1238, 1328, 1525
GluI	GCNGC	3 cut(s)	267, 564, 1058
GsuI	CTGGAG	4 cut(s)	344, 608, 1089, 1540
HaeII	RGCGCY	2 cut(s)	252, 267
HaeIII	GGCC	1 cut(s)	900
HapII	CCGG	3 cut(s)	192, 225, 335
HgaI	GACGC	2 cut(s)	735, 1091
HhaI	GCGC	5 cut(s)	251, 266, 1239, 1329, 1526
Hin1I	GRCGYC	1 cut(s)	234
Hin1II	CATG	6 cut(s)	167, 683, 821, 1045, 1338, 1498
Hin6I	GCGC	5 cut(s)	249, 264, 1237, 1327, 1524
HinP1I	GCGC	5 cut(s)	249, 264, 1237, 1327, 1524
HinfI	GANTC	3 cut(s)	160, 537, 1220
HpaII	CCGG	3 cut(s)	192, 225, 335
HphI	GGTGA	2 cut(s)	1097, 1476
Hpy166II	GTNNAC	2 cut(s)	42, 794
Hpy188I	TCNGA	6 cut(s)	172, 209, 440, 505, 1144, 1350
Hpy188III	TCNNGA	4 cut(s)	225, 665, 983, 1519
Hpy8I	GTNNAC	2 cut(s)	42, 794
Hpy99I	CGWCG	2 cut(s)	96, 729
HpyAV	CCTTC	5 cut(s)	92, 1000, 1312, 1491, 1553
HpyCH4III	ACNGT	5 cut(s)	104, 477, 495, 601, 1132
HpyCH4IV	ACGT	5 cut(s)	44, 94, 234, 1180, 1462
HpyCH4V	TGCA	5 cut(s)	275, 806, 1001, 1209, 1250
HpyF10VI	GCNNNNNNNGC	7 cut(s)	257, 266, 272, 708, 1335, 1530, 1616
HpyF3I	CTNAG	5 cut(s)	654, 744, 1157, 1349, 1415
HpySE526I	ACGT	5 cut(s)	44, 94, 234, 1180, 1462
Hsp92I	GRCGYC	1 cut(s)	234
Hsp92II	CATG	6 cut(s)	167, 683, 821, 1045, 1338, 1498
HspAI	GCGC	5 cut(s)	249, 264, 1237, 1327, 1524
Kpn2I	TCCGGA	1 cut(s)	224
Kzo9I	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	9 cut(s)	194, 227, 589, 688, 926, 964, 1070, 1521, 1615
Lsp1109I	GCAGC	3 cut(s)	253, 550, 1069
LweI	GCATC	5 cut(s)	412, 1078, 1183, 1259, 1314
MaeI	CTAG	1 cut(s)	1217
MaeII	ACGT	5 cut(s)	44, 94, 234, 1180, 1462
MaeIII	GTNAC	2 cut(s)	601, 1181
MalI	GATC	6 cut(s)	23, 27, 339, 834, 987, 1164
MboI	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
MfeI	CAATTG	2 cut(s)	693, 1002
MflI	RGATCY	1 cut(s)	1162
MhlI	GDGCHC	5 cut(s)	191, 759, 1075, 1279, 1612
MlsI	TGGCCA	1 cut(s)	900
MluCI	AATT	7 cut(s)	97, 342, 630, 693, 777, 787, 1002
MluNI	TGGCCA	1 cut(s)	900
MmeI	TCCRAC	2 cut(s)	232, 1438
Mox20I	TGGCCA	1 cut(s)	900
MroI	TCCGGA	1 cut(s)	224
MscI	TGGCCA	1 cut(s)	900
MseI	TTAA	7 cut(s)	135, 453, 776, 1079, 1112, 1170, 1514
MslI	CAYNNNNRTG	2 cut(s)	504, 816
Msp20I	TGGCCA	1 cut(s)	900
MspA1I	CMGCKG	2 cut(s)	879, 1414
MspI	CCGG	3 cut(s)	192, 225, 335
MspR9I	CCNGG	4 cut(s)	366, 488, 897, 1068
MunI	CAATTG	2 cut(s)	693, 1002
MvaI	CCWGG	4 cut(s)	366, 488, 897, 1068
MwoI	GCNNNNNNNGC	7 cut(s)	257, 266, 272, 708, 1335, 1530, 1616
NdeII	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
NlaIII	CATG	6 cut(s)	167, 683, 821, 1045, 1338, 1498
NlaIV	GGNNCC	5 cut(s)	223, 1072, 1276, 1363, 1611
NmeAIII	GCCGAG	1 cut(s)	142
NmuCI	GTSAC	2 cut(s)	601, 1181
NsbI	TGCGCA	1 cut(s)	1238
NspI	RCATGY	4 cut(s)	821, 1045, 1338, 1498
PaeI	GCATGC	2 cut(s)	1045, 1338
PaqCI	CACCTGC	1 cut(s)	1262
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PfeI	GAWTC	3 cut(s)	160, 537, 1220
PflMI	CCANNNNNTGG	1 cut(s)	1067
PfoI	TCCNGGA	1 cut(s)	1066
PkrI	GCNGC	3 cut(s)	268, 565, 1059
Ple19I	CGATCG	1 cut(s)	24
Ppu21I	YACGTR	1 cut(s)	1181
PshBI	ATTAAT	2 cut(s)	776, 1514
Psp124BI	GAGCTC	1 cut(s)	191
Psp6I	CCWGG	4 cut(s)	364, 486, 895, 1066
PspGI	CCWGG	4 cut(s)	364, 486, 895, 1066
PspN4I	GGNNCC	5 cut(s)	223, 1072, 1276, 1363, 1611
PspPI	GGNCC	2 cut(s)	874, 1376
PsuI	RGATCY	1 cut(s)	1162
PvuI	CGATCG	1 cut(s)	24
RsaI	GTAC	5 cut(s)	582, 598, 647, 868, 909
RsaNI	GTAC	5 cut(s)	581, 597, 646, 867, 908
RseI	CAYNNNNRTG	2 cut(s)	504, 816
SacI	GAGCTC	1 cut(s)	191
SapI	GCTCTTC	1 cut(s)	179
SaqAI	TTAA	7 cut(s)	135, 453, 776, 1079, 1112, 1170, 1514
SatI	GCNGC	3 cut(s)	267, 564, 1058
Sau3AI	GATC	6 cut(s)	21, 25, 337, 832, 985, 1162
Sau96I	GGNCC	2 cut(s)	874, 1376
ScrFI	CCNGG	4 cut(s)	366, 488, 897, 1068
SduI	GDGCHC	5 cut(s)	191, 759, 1075, 1279, 1612
SfaNI	GCATC	5 cut(s)	412, 1078, 1183, 1259, 1314
SinI	GGWCC	2 cut(s)	874, 1376
SmiMI	CAYNNNNRTG	2 cut(s)	504, 816
SphI	GCATGC	2 cut(s)	1045, 1338
Sse9I	AATT	7 cut(s)	97, 342, 630, 693, 777, 787, 1002
SsiI	CCGC	6 cut(s)	88, 114, 512, 877, 1055, 1412
SspI	AATATT	1 cut(s)	1539
SspMI	CTAG	1 cut(s)	1217
SstI	GAGCTC	1 cut(s)	191
StyD4I	CCNGG	4 cut(s)	364, 486, 895, 1066
StyI	CCWWGG	3 cut(s)	283, 1266, 1354
TaaI	ACNGT	5 cut(s)	104, 477, 495, 601, 1132
TaiI	ACGT	5 cut(s)	47, 97, 237, 1183, 1465
TaqI	TCGA	3 cut(s)	24, 340, 420
TaqII	GACCGA	1 cut(s)	170
TasI	AATT	7 cut(s)	97, 342, 630, 693, 777, 787, 1002
TatI	WGTACW	3 cut(s)	580, 645, 866
TfiI	GAWTC	3 cut(s)	160, 537, 1220
Tru1I	TTAA	7 cut(s)	135, 453, 776, 1079, 1112, 1170, 1514
Tru9I	TTAA	7 cut(s)	135, 453, 776, 1079, 1112, 1170, 1514
TscAI	CASTG	2 cut(s)	480, 1386
TseFI	GTSAC	2 cut(s)	601, 1181
TseI	GCWGC	3 cut(s)	266, 563, 1057
Tsp45I	GTSAC	2 cut(s)	601, 1181
TspDTI	ATGAA	3 cut(s)	529, 982, 1191
TspGWI	ACGGA	2 cut(s)	18, 213
TspRI	CASTG	2 cut(s)	480, 1386
Van91I	CCANNNNNTGG	1 cut(s)	1067
VpaK11BI	GGWCC	2 cut(s)	874, 1376
VspI	ATTAAT	2 cut(s)	776, 1514
XagI	CCTNNNNNAGG	2 cut(s)	287, 1283
XceI	RCATGY	4 cut(s)	821, 1045, 1338, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	583
XspI	CTAG	1 cut(s)	1217
ZraI	GACGTC	1 cut(s)	235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.