Rmu_sc0001293.1_g000007

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001293.1
OG0000108
Physical Location & Seq
Reverse (-)
33546 .. 35953
2408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001293.1_g000007.1.cds

Sequence Viewer

Length: 1461 bp
atggtttcttatgaggacgttctgggtgggttgttagcttcattgctgggctctgttttcttcatgatcatcagtgctacacttggtggaaacaaaaatgtcaaggctttaagtggaggagtcaagagtaatgggtttggaaacggtgagtttcagccggaaatggaggaagagaaaagtacagatgtcgtcattgtcggcgccggagttgccggagcagctcttgcttacactcttgccaaggaaggacgccgtgtacatgccatcgaaagagacttgagtgagccagatagaattgttggggagctgttgcagcctgggggctatctcaaattgattgagttaggtcttgaagactgtgcaaatgagtccattgatgctcagaaagtgtttggctatgctctttacaaagatgggaaggacacaaaattgtcttatcccttggaaaaatacagttcaggtgtggctggcagaagttctcacaatgggcgtttcacccaaagaatgggtgaaaaagctgcaactctttcaaatgtaaaattggaacagggatcagtaacaacactaattgaagaaaagggcattgtcaaaggtgtaatttacaggaacaaggctggagaggagatgagaacatatgctccactaacagtcgtgtgtgatggttgcttttcaaatctgcgcaaatctctcggtgctccgaaggtaacaatgggaactgtgagcttccacacacaaatcatgggcatgtcattttgggagacccttcacccatcctgttttatcctatcagttcccatgaggttcgttgtttggtggatgtacctagaacaaaagtacgtaccttcagttgctagtggtgaaatggttaaacatttgaaaagcaaggttgctcctcagattccgcctcagctctacaatgcttttatggctgctatcgacaagggaaatatcagaacaatgcaaaacaaaagcatggctgctaatgagggtcccactcctggggcaattttattgggggattcgttcaacatgaggcatccattaacaggaggaggaatgactgtggctctttcagacattgttcttctccgcaatcttcttagacctctacgtgatctgaattatgcacctgctttgtgcaactaccttgagtcattctacacattgcataagcctgtgtcatccaccataaacacattggcaggtgctttgtataaggtgttttgtgcatcacctgatcaggcaagacaggaaatgcgtgaagcatgtttcggctatttgagccttggaggcatctgttcatatggactagtatctcttctttctggtcttaaccctcgtctgccgcacttgtttctccatttctttgctgttggtatctatgatgtagggcgtttaatgcttccattcccttcacccaagcgcatgtggcttggggctagattgacctcgatatgctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

486

Amino Acids

52.97

Weight (kDa)

8.78

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1138, 1193
Acc16I TGCGCA 1 cut(s) 680
Acc36I ACCTGC 2 cut(s) 1138, 1193
AccB1I GGYRCC 1 cut(s) 200
AccB7I CCANNNNNTGG 1 cut(s) 505
AciI CCGC 3 cut(s) 902, 1090, 1346
AclWI GGATC 1 cut(s) 559
AcuI CTGAAG 1 cut(s) 828
AcyI GRCGYC 2 cut(s) 201, 250
AdeI CACNNNGTG 1 cut(s) 86
AfaI GTAC 5 cut(s) 181, 258, 821, 836, 840
AfiI CCNNNNNNNGG 4 cut(s) 505, 998, 999, 1046
AgsI TTSAA 6 cut(s) 353, 531, 572, 672, 877, 1027
AhlI ACTAGT 1 cut(s) 1309
AjnI CCWGG 2 cut(s) 316, 997
AloI GAACNNNNNNTCC 2 cut(s) 622, 654
AluBI AGCT 6 cut(s) 38, 221, 307, 518, 723, 910
AluI AGCT 6 cut(s) 38, 221, 307, 518, 723, 910
Alw21I GWGCWC 1 cut(s) 697
Alw26I GTCTC 2 cut(s) 267, 752
AlwI GGATC 1 cut(s) 559
ApeKI GCWGC 5 cut(s) 218, 313, 518, 929, 977
AspLEI GCGC 3 cut(s) 203, 681, 1425
AspS9I GGNCC 1 cut(s) 989
AsuHPI GGTGA 7 cut(s) 158, 487, 521, 758, 869, 1224, 1407
AvaII GGWCC 1 cut(s) 989
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 53
BbsI GAAGAC 1 cut(s) 360
Bbv12I GWGCWC 1 cut(s) 697
BbvCI CCTCAGC 1 cut(s) 906
BbvI GCAGC 5 cut(s) 230, 325, 505, 916, 964
BccI CCATC 4 cut(s) 272, 407, 653, 778
BceAI ACGGC 1 cut(s) 237
BcgI CGANNNNNNTGC 2 cut(s) 670, 704
BciT130I CCWGG 2 cut(s) 318, 999
BclI TGATCA 2 cut(s) 66, 1237
BcoDI GTCTC 2 cut(s) 267, 752
BcuI ACTAGT 1 cut(s) 1309
BfaI CTAG 4 cut(s) 824, 852, 1310, 1440
BfoI RGCGCY 1 cut(s) 204
BfuAI ACCTGC 2 cut(s) 1138, 1193
BglI GCCNNNNNGGC 1 cut(s) 1290
BisI GCNGC 6 cut(s) 219, 314, 519, 930, 978, 1346
BlsI GCNGC 6 cut(s) 220, 315, 520, 931, 979, 1347
Bme1390I CCNGG 2 cut(s) 318, 999
Bme18I GGWCC 1 cut(s) 989
BmgT120I GGNCC 1 cut(s) 989
BmiI GGNNCC 3 cut(s) 202, 990, 991
BmrFI CCNGG 2 cut(s) 318, 999
BmsI GCATC 4 cut(s) 367, 1045, 1238, 1302
BpiI GAAGAC 1 cut(s) 360
BpmI CTGGAG 1 cut(s) 636
Bpu10I CCTNAGC 1 cut(s) 906
BpuEI CTTGAG 2 cut(s) 298, 1169
BsaAI YACGTR 2 cut(s) 838, 1112
BsaHI GRCGYC 2 cut(s) 201, 250
BsaI GGTCTC 1 cut(s) 752
BsaJI CCNNGG 5 cut(s) 240, 317, 441, 998, 1285
BsaXI ACNNNNNCTCC 2 cut(s) 622, 652
Bsc4I CCNNNNNNNGG 4 cut(s) 505, 998, 999, 1046
Bse3DI GCAATG 2 cut(s) 41, 1163
BseBI CCWGG 2 cut(s) 318, 999
BseDI CCNNGG 5 cut(s) 240, 317, 441, 998, 1285
BseGI GGATG 4 cut(s) 770, 822, 1036, 1181
BseLI CCNNNNNNNGG 4 cut(s) 505, 998, 999, 1046
BseMI GCAATG 2 cut(s) 41, 1163
BseMII CTCAG 3 cut(s) 395, 908, 920
BseRI GAGGAG 4 cut(s) 132, 635, 882, 1065
BseXI GCAGC 5 cut(s) 230, 325, 505, 916, 964
BseYI CCCAGC 1 cut(s) 46
BshNI GGYRCC 1 cut(s) 200
BsiHKAI GWGCWC 1 cut(s) 697
BsiSI CCGG 3 cut(s) 158, 204, 213
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 4 cut(s) 505, 998, 999, 1046
BsmAI GTCTC 2 cut(s) 267, 752
BsmFI GGGAC 1 cut(s) 975
Bso31I GGTCTC 1 cut(s) 752
Bsp1286I GDGCHC 2 cut(s) 53, 697
Bsp1407I TGTACA 1 cut(s) 256
Bsp143I GATC 4 cut(s) 66, 551, 1114, 1237
BspACI CCGC 3 cut(s) 902, 1090, 1346
BspCNI CTCAG 3 cut(s) 394, 907, 919
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 202, 990, 991
BspMI ACCTGC 2 cut(s) 1138, 1193
BspPI GGATC 1 cut(s) 559
BspT107I GGYRCC 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 752
BsrDI GCAATG 2 cut(s) 41, 1163
BsrGI TGTACA 1 cut(s) 256
BssECI CCNNGG 5 cut(s) 240, 317, 441, 998, 1285
BssMI GATC 4 cut(s) 66, 551, 1114, 1237
BssNI GRCGYC 2 cut(s) 201, 250
BssT1I CCWWGG 3 cut(s) 240, 441, 1285
Bst2UI CCWGG 2 cut(s) 318, 999
Bst4CI ACNGT 6 cut(s) 146, 359, 455, 649, 718, 1063
Bst6I CTCTTC 2 cut(s) 165, 1323
BstACI GRCGYC 2 cut(s) 201, 250
BstAPI GCANNNNNTGC 1 cut(s) 224
BstAUI TGTACA 1 cut(s) 256
BstBAI YACGTR 2 cut(s) 838, 1112
BstC8I GCNNGC 1 cut(s) 469
BstDEI CTNAG 4 cut(s) 381, 894, 906, 1100
BstF5I GGATG 4 cut(s) 770, 822, 1036, 1181
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 3 cut(s) 203, 681, 1425
BstKTI GATC 4 cut(s) 69, 554, 1117, 1240
BstMAI GTCTC 2 cut(s) 267, 752
BstMBI GATC 4 cut(s) 66, 551, 1114, 1237
BstMWI GCNNNNNNNGC 9 cut(s) 209, 218, 224, 313, 926, 1281, 1290, 1399, 1429
BstNI CCWGG 2 cut(s) 318, 999
BstNSI RCATGY 4 cut(s) 263, 748, 1269, 1429
BstSCI CCNGG 2 cut(s) 316, 997
BstSNI TACGTA 1 cut(s) 838
BstV1I GCAGC 5 cut(s) 230, 325, 505, 916, 964
BstV2I GAAGAC 1 cut(s) 360
BtsCI GGATG 4 cut(s) 770, 822, 1036, 1181
BtsIMutI CAGTG 1 cut(s) 79
BveI ACCTGC 2 cut(s) 1138, 1193
Cac8I GCNNGC 1 cut(s) 469
CciI TCATGA 1 cut(s) 63
CfoI GCGC 3 cut(s) 203, 681, 1425
Cfr13I GGNCC 1 cut(s) 989
CseI GACGC 1 cut(s) 258
Csp6I GTAC 5 cut(s) 180, 257, 820, 835, 839
CviAII CATG 9 cut(s) 64, 260, 739, 745, 796, 973, 1030, 1266, 1426
CviQI GTAC 5 cut(s) 180, 257, 820, 835, 839
DdeI CTNAG 4 cut(s) 381, 894, 906, 1100
DinI GGCGCC 1 cut(s) 202
DpnI GATC 4 cut(s) 68, 553, 1116, 1239
DpnII GATC 4 cut(s) 66, 551, 1114, 1237
DraIII CACNNNGTG 1 cut(s) 86
Eam1104I CTCTTC 2 cut(s) 165, 1323
EarI CTCTTC 2 cut(s) 165, 1323
EciI GGCGGA 1 cut(s) 891
Eco105I TACGTA 1 cut(s) 838
Eco130I CCWWGG 3 cut(s) 240, 441, 1285
Eco24I GRGCYC 1 cut(s) 53
Eco31I GGTCTC 1 cut(s) 752
Eco47I GGWCC 1 cut(s) 989
Eco57I CTGAAG 1 cut(s) 828
EcoO109I RGGNCCY 1 cut(s) 989
EcoRII CCWGG 2 cut(s) 316, 997
EcoT14I CCWWGG 3 cut(s) 240, 441, 1285
EcoT38I GRGCYC 1 cut(s) 53
EgeI GGCGCC 1 cut(s) 202
EheI GGCGCC 1 cut(s) 202
ErhI CCWWGG 3 cut(s) 240, 441, 1285
FaeI CATG 9 cut(s) 67, 263, 742, 748, 799, 976, 1033, 1269, 1429
FaqI GGGAC 1 cut(s) 975
FatI CATG 9 cut(s) 63, 259, 738, 744, 795, 972, 1029, 1265, 1425
FauNDI CATATG 2 cut(s) 634, 1303
FbaI TGATCA 2 cut(s) 66, 1237
Fnu4HI GCNGC 6 cut(s) 219, 314, 519, 930, 978, 1346
FokI GGATG 4 cut(s) 757, 829, 1023, 1168
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 6 cut(s) 219, 314, 519, 930, 978, 1346
FspBI CTAG 4 cut(s) 824, 852, 1310, 1440
FspI TGCGCA 1 cut(s) 680
GlaI GCGC 3 cut(s) 202, 680, 1424
GluI GCNGC 6 cut(s) 219, 314, 519, 930, 978, 1346
GsaI CCCAGC 1 cut(s) 50
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 204
HapII CCGG 3 cut(s) 158, 204, 213
HgaI GACGC 1 cut(s) 258
HhaI GCGC 3 cut(s) 203, 681, 1425
Hin1I GRCGYC 2 cut(s) 201, 250
Hin1II CATG 9 cut(s) 67, 263, 742, 748, 799, 976, 1033, 1269, 1429
Hin6I GCGC 3 cut(s) 201, 679, 1423
HinP1I GCGC 3 cut(s) 201, 679, 1423
HinfI GANTC 5 cut(s) 120, 368, 898, 1019, 1151
HpaII CCGG 3 cut(s) 158, 204, 213
HphI GGTGA 7 cut(s) 158, 487, 521, 758, 869, 1224, 1407
Hpy166II GTNNAC 1 cut(s) 257
Hpy188I TCNGA 6 cut(s) 384, 699, 897, 953, 1075, 1119
Hpy188III TCNNGA 3 cut(s) 64, 124, 350
Hpy8I GTNNAC 1 cut(s) 257
HpyAV CCTTC 6 cut(s) 239, 412, 694, 773, 852, 1422
HpyCH4III ACNGT 6 cut(s) 146, 359, 455, 649, 718, 1063
HpyCH4IV ACGT 3 cut(s) 18, 837, 1111
HpyCH4V TGCA 8 cut(s) 313, 362, 521, 961, 1127, 1140, 1168, 1229
HpyF10VI GCNNNNNNNGC 9 cut(s) 209, 218, 224, 313, 926, 1281, 1290, 1399, 1429
HpyF3I CTNAG 4 cut(s) 381, 894, 906, 1100
HpySE526I ACGT 3 cut(s) 18, 837, 1111
Hsp92I GRCGYC 2 cut(s) 201, 250
Hsp92II CATG 9 cut(s) 67, 263, 742, 748, 799, 976, 1033, 1269, 1429
HspAI GCGC 3 cut(s) 201, 679, 1423
KasI GGCGCC 1 cut(s) 200
KflI GGGWCCC 1 cut(s) 989
Ksp22I TGATCA 2 cut(s) 66, 1237
Kzo9I GATC 4 cut(s) 66, 551, 1114, 1237
LmnI GCTCC 5 cut(s) 215, 304, 643, 700, 895
Lsp1109I GCAGC 5 cut(s) 230, 325, 505, 916, 964
LweI GCATC 4 cut(s) 367, 1045, 1238, 1302
MaeI CTAG 4 cut(s) 824, 852, 1310, 1440
MaeII ACGT 3 cut(s) 18, 837, 1111
MaeIII GTNAC 2 cut(s) 556, 703
MalI GATC 4 cut(s) 68, 553, 1116, 1239
MboI GATC 4 cut(s) 66, 551, 1114, 1237
MboII GAAGA 7 cut(s) 52, 182, 365, 584, 1076, 1088, 1310
MhlI GDGCHC 2 cut(s) 53, 697
MluCI AATT 8 cut(s) 294, 332, 428, 539, 567, 597, 1005, 1120
Mly113I GGCGCC 1 cut(s) 201
MlyI GAGTC 3 cut(s) 129, 377, 1160
MseI TTAA 5 cut(s) 110, 867, 1043, 1332, 1397
MslI CAYNNNNRTG 1 cut(s) 743
MspI CCGG 3 cut(s) 158, 204, 213
MspR9I CCNGG 2 cut(s) 318, 999
MvaI CCWGG 2 cut(s) 318, 999
MwoI GCNNNNNNNGC 9 cut(s) 209, 218, 224, 313, 926, 1281, 1290, 1399, 1429
NarI GGCGCC 1 cut(s) 201
NdeI CATATG 2 cut(s) 634, 1303
NdeII GATC 4 cut(s) 66, 551, 1114, 1237
NlaIII CATG 9 cut(s) 67, 263, 742, 748, 799, 976, 1033, 1269, 1429
NlaIV GGNNCC 3 cut(s) 202, 990, 991
NsbI TGCGCA 1 cut(s) 680
NspI RCATGY 4 cut(s) 263, 748, 1269, 1429
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 2 cut(s) 1138, 1193
PfeI GAWTC 2 cut(s) 898, 1019
PflMI CCANNNNNTGG 1 cut(s) 505
PkrI GCNGC 6 cut(s) 220, 315, 520, 931, 979, 1347
PleI GAGTC 3 cut(s) 128, 376, 1159
PluTI GGCGCC 1 cut(s) 204
PpsI GAGTC 3 cut(s) 128, 376, 1159
Ppu21I YACGTR 2 cut(s) 838, 1112
PpuMI RGGWCCY 1 cut(s) 989
Psp5II RGGWCCY 1 cut(s) 989
Psp6I CCWGG 2 cut(s) 316, 997
PspFI CCCAGC 1 cut(s) 46
PspGI CCWGG 2 cut(s) 316, 997
PspN4I GGNNCC 3 cut(s) 202, 990, 991
PspPI GGNCC 1 cut(s) 989
PspPPI RGGWCCY 1 cut(s) 989
RsaI GTAC 5 cut(s) 181, 258, 821, 836, 840
RsaNI GTAC 5 cut(s) 180, 257, 820, 835, 839
RseI CAYNNNNRTG 1 cut(s) 743
SaqAI TTAA 5 cut(s) 110, 867, 1043, 1332, 1397
SatI GCNGC 6 cut(s) 219, 314, 519, 930, 978, 1346
Sau3AI GATC 4 cut(s) 66, 551, 1114, 1237
Sau96I GGNCC 1 cut(s) 989
SchI GAGTC 3 cut(s) 129, 377, 1160
ScrFI CCNGG 2 cut(s) 318, 999
SduI GDGCHC 2 cut(s) 53, 697
SfaNI GCATC 4 cut(s) 367, 1045, 1238, 1302
SfoI GGCGCC 1 cut(s) 202
SinI GGWCC 1 cut(s) 989
SmiMI CAYNNNNRTG 1 cut(s) 743
SmlI CTYRAG 2 cut(s) 277, 1148
SmoI CTYRAG 2 cut(s) 277, 1148
SnaBI TACGTA 1 cut(s) 838
SpeI ACTAGT 1 cut(s) 1309
Sse9I AATT 8 cut(s) 294, 332, 428, 539, 567, 597, 1005, 1120
SsiI CCGC 3 cut(s) 902, 1090, 1346
SspDI GGCGCC 1 cut(s) 200
SspMI CTAG 4 cut(s) 824, 852, 1310, 1440
StyD4I CCNGG 2 cut(s) 316, 997
StyI CCWWGG 3 cut(s) 240, 441, 1285
TaaI ACNGT 6 cut(s) 146, 359, 455, 649, 718, 1063
TaiI ACGT 3 cut(s) 21, 840, 1114
TaqI TCGA 3 cut(s) 267, 936, 1451
TasI AATT 8 cut(s) 294, 332, 428, 539, 567, 597, 1005, 1120
TatI WGTACW 2 cut(s) 179, 256
TauI GCSGC 1 cut(s) 1348
TfiI GAWTC 2 cut(s) 898, 1019
Tru1I TTAA 5 cut(s) 110, 867, 1043, 1332, 1397
Tru9I TTAA 5 cut(s) 110, 867, 1043, 1332, 1397
TscAI CASTG 1 cut(s) 79
TseI GCWGC 5 cut(s) 218, 313, 518, 929, 977
TspDTI ATGAA 3 cut(s) 30, 52, 1290
TspRI CASTG 1 cut(s) 79
Van91I CCANNNNNTGG 1 cut(s) 505
VpaK11BI GGWCC 1 cut(s) 989
XceI RCATGY 4 cut(s) 263, 748, 1269, 1429
XcmI CCANNNNNNNNNTGG 1 cut(s) 1195
XspI CTAG 4 cut(s) 824, 852, 1310, 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.