Squalene monooxygenase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SE | PF08491 | 1 - 97 | 5.2e-39 | Squalene epoxidase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 212 |
| AclWI | GGATC | 2 cut(s) | 141, 144 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AfaI | GTAC | 1 cut(s) | 257 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 41, 89 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| AlwI | GGATC | 2 cut(s) | 141, 144 |
| AoxI | GGCC | 1 cut(s) | 243 |
| AspLEI | GCGC | 1 cut(s) | 213 |
| AsuC2I | CCSGG | 1 cut(s) | 284 |
| AsuHPI | GGTGA | 3 cut(s) | 71, 267, 272 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BcnI | CCSGG | 1 cut(s) | 284 |
| Bme1390I | CCNGG | 2 cut(s) | 42, 284 |
| BmiI | GGNNCC | 1 cut(s) | 250 |
| BmrFI | CCNGG | 2 cut(s) | 42, 284 |
| BmsI | GCATC | 2 cut(s) | 52, 281 |
| BpuMI | CCSGG | 1 cut(s) | 284 |
| BsaBI | GATNNNNATC | 1 cut(s) | 151 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| BsaWI | WCCGGW | 1 cut(s) | 89 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 41, 89 |
| Bse3DI | GCAATG | 1 cut(s) | 206 |
| Bse8I | GATNNNNATC | 1 cut(s) | 151 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseJI | GATNNNNATC | 1 cut(s) | 151 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 41, 89 |
| BseMI | GCAATG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 1 cut(s) | 108 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BsiSI | CCGG | 3 cut(s) | 90, 246, 284 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 41, 89 |
| BsnI | GGCC | 1 cut(s) | 245 |
| Bsp1407I | TGTACA | 1 cut(s) | 255 |
| Bsp143I | GATC | 3 cut(s) | 136, 146, 157 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspLI | GGNNCC | 1 cut(s) | 250 |
| BspPI | GGATC | 2 cut(s) | 141, 144 |
| BsrDI | GCAATG | 1 cut(s) | 206 |
| BsrGI | TGTACA | 1 cut(s) | 255 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| BssMI | GATC | 3 cut(s) | 136, 146, 157 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| BstAUI | TGTACA | 1 cut(s) | 255 |
| BstC8I | GCNNGC | 3 cut(s) | 17, 21, 215 |
| BstDEI | CTNAG | 2 cut(s) | 131, 143 |
| BstDSI | CCRYGG | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 213 |
| BstKTI | GATC | 3 cut(s) | 139, 149, 160 |
| BstMBI | GATC | 3 cut(s) | 136, 146, 157 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstNSI | RCATGY | 2 cut(s) | 19, 76 |
| BstSCI | CCNGG | 2 cut(s) | 40, 282 |
| BstX2I | RGATCY | 2 cut(s) | 136, 146 |
| BstYI | RGATCY | 2 cut(s) | 136, 146 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| BtgI | CCRYGG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 3 cut(s) | 17, 21, 215 |
| CfoI | GCGC | 1 cut(s) | 213 |
| CseI | GACGC | 1 cut(s) | 176 |
| Csp6I | GTAC | 1 cut(s) | 256 |
| CviAII | CATG | 2 cut(s) | 16, 73 |
| CviJI | RGCY | 5 cut(s) | 110, 176, 217, 245, 251 |
| CviKI_1 | RGCY | 5 cut(s) | 110, 176, 217, 245, 251 |
| CviQI | GTAC | 1 cut(s) | 256 |
| DdeI | CTNAG | 2 cut(s) | 131, 143 |
| DpnI | GATC | 3 cut(s) | 138, 148, 159 |
| DpnII | GATC | 3 cut(s) | 136, 146, 157 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| EcoT22I | ATGCAT | 1 cut(s) | 67 |
| FaeI | CATG | 2 cut(s) | 19, 76 |
| FaiI | YATR | 3 cut(s) | 17, 74, 233 |
| FatI | CATG | 2 cut(s) | 15, 72 |
| FspI | TGCGCA | 1 cut(s) | 212 |
| GlaI | GCGC | 1 cut(s) | 212 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| HapII | CCGG | 3 cut(s) | 90, 246, 284 |
| HgaI | GACGC | 1 cut(s) | 176 |
| HhaI | GCGC | 1 cut(s) | 213 |
| Hin1II | CATG | 2 cut(s) | 19, 76 |
| Hin6I | GCGC | 1 cut(s) | 211 |
| HinP1I | GCGC | 1 cut(s) | 211 |
| HinfI | GANTC | 1 cut(s) | 194 |
| HpaII | CCGG | 3 cut(s) | 90, 246, 284 |
| HphI | GGTGA | 3 cut(s) | 71, 267, 272 |
| Hpy188I | TCNGA | 2 cut(s) | 118, 157 |
| Hpy188III | TCNNGA | 1 cut(s) | 191 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 47, 65, 272 |
| HpyF3I | CTNAG | 2 cut(s) | 131, 143 |
| Hsp92II | CATG | 2 cut(s) | 19, 76 |
| HspAI | GCGC | 1 cut(s) | 211 |
| Kzo9I | GATC | 3 cut(s) | 136, 146, 157 |
| LmnI | GCTCC | 1 cut(s) | 248 |
| LpnPI | CCDG | 9 cut(s) | 27, 33, 42, 54, 103, 186, 231, 259, 297 |
| LweI | GCATC | 2 cut(s) | 52, 281 |
| MalI | GATC | 3 cut(s) | 138, 148, 159 |
| MboI | GATC | 3 cut(s) | 136, 146, 157 |
| MboII | GAAGA | 2 cut(s) | 119, 131 |
| MflI | RGATCY | 2 cut(s) | 136, 146 |
| MluCI | AATT | 1 cut(s) | 48 |
| MnlI | CCTC | 3 cut(s) | 86, 89, 288 |
| Mph1103I | ATGCAT | 1 cut(s) | 67 |
| MseI | TTAA | 2 cut(s) | 68, 86 |
| MspI | CCGG | 3 cut(s) | 90, 246, 284 |
| MspR9I | CCNGG | 2 cut(s) | 42, 284 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| NciI | CCSGG | 1 cut(s) | 284 |
| NdeII | GATC | 3 cut(s) | 136, 146, 157 |
| NlaIII | CATG | 2 cut(s) | 19, 76 |
| NlaIV | GGNNCC | 1 cut(s) | 250 |
| NsbI | TGCGCA | 1 cut(s) | 212 |
| NsiI | ATGCAT | 1 cut(s) | 67 |
| NspI | RCATGY | 2 cut(s) | 19, 76 |
| PaeI | GCATGC | 1 cut(s) | 19 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 1 cut(s) | 250 |
| PsuI | RGATCY | 2 cut(s) | 136, 146 |
| RsaI | GTAC | 1 cut(s) | 257 |
| RsaNI | GTAC | 1 cut(s) | 256 |
| SaqAI | TTAA | 2 cut(s) | 68, 86 |
| Sau3AI | GATC | 3 cut(s) | 136, 146, 157 |
| ScrFI | CCNGG | 2 cut(s) | 42, 284 |
| SetI | ASST | 3 cut(s) | 178, 264, 280 |
| SfaNI | GCATC | 2 cut(s) | 52, 281 |
| SphI | GCATGC | 1 cut(s) | 19 |
| Sse9I | AATT | 1 cut(s) | 48 |
| StyD4I | CCNGG | 2 cut(s) | 40, 282 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TaqI | TCGA | 1 cut(s) | 192 |
| TasI | AATT | 1 cut(s) | 48 |
| TatI | WGTACW | 1 cut(s) | 255 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 2 cut(s) | 68, 86 |
| Tru9I | TTAA | 2 cut(s) | 68, 86 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| XceI | RCATGY | 2 cut(s) | 19, 76 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 238 |
| Zsp2I | ATGCAT | 1 cut(s) | 67 |