pycom07g02910

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000108
Physical Location & Seq
Reverse (-)
2417411 .. 2419457
2047 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02910.5

Sequence Viewer

Length: 1131 bp
ATGGTTTATGAGTATGTTCTTGCTGGTGTCCTGGTTTCATTGTTGAGTTCTGTTTTCTTCCTCATCATAAACACCACCTACAGCGAAAAGAAGAAGGAAGACGTCGCGAATGTTTCTGAAACTGGTGTTTTTTCGGCGACGGAGATTGAGAAAAATACTGATGTTGTCATTGTTGGTGCCGGAGTTGCTGGTGCTGCGCTTGCTTACACTCTTGGGAAGGAAGGACGGCGTGTACATGTGATCGAAAGAGACTTGAACGAGCCAGACAGAATTGTTGGTGAACTATTGCAGCCTGGAGGCTATCTCAAGTTGATTGAATTGGGTCTTGAAGATTGTGCTAATGAGTCCATTGATGCTCAAAAAGTGTTTGGTTATGCCCTTTACAAAAATGGCAATGACACAAAACTGTCATATCCCTTAGAAACATATAGTTCAGATATCGCCGGGAGAAGTTTCCACAATGGACGTTTCATCCAACGAATGCGCGAAAGGGCTGCAACTCTTTCAAATGTGAAAATGGAACAAGGAACAGTGACAACACTAATTGAAGAAAATGGCACTATCAGAGGAGTGATGTACAAGAACAAGGCCGGAGAGGAGATGAGAACATATGCTCCGCTAACAATAGTATGCGATGGCTGCTTTTCAAATCTGCGCCGCTCTATCTCTACTCCCAATATTGAAAATCCATCCTGCTTTGTCGGTTTGATCTTGGAGAACTGTGAGCTTCCTCATGCAAACCATGGACATGTGATTTTGGGAGACCCTTCACCCATCTTGTTTTATCCTATTAGTAGCACCGAGGTTCGTTGTTTGGTAGATGTACCCGGCACAAAAGTACCATCAGTAGCTAACGGTGAAATGGCTCAGTATTTGAAAACCATGGTGGCTCCTCAGGTTCCCCATCAGCTCTTAAAGGCTTTTCTAGCAACGGTTGATAAAGGAATTATCAGAACAATGCAAAACAAAAGCATGCCGGCTGCTCCTCAGCCCACCCCTGGCGCAATTTTATTGGGGGATGCTTTCAACATAAGACATCCTTTAACTGGAGGAGGAATGACTGTGGCTCTTTCCGACATTGTTCTTCTAAGGGATCGATCCAAGGGTTACGGTTTTGAGACCCCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

377

Amino Acids

40.96

Weight (kDa)

6.03

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
AccB1I GGYRCC 1 cut(s) 176
AccBSI CCGCTC 1 cut(s) 660
AccII CGCG 2 cut(s) 107, 486
AciI CCGC 2 cut(s) 617, 658
AclWI GGATC 2 cut(s) 1092, 1101
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 4 cut(s) 234, 578, 825, 840
AfiI CCNNNNNNNGG 2 cut(s) 998, 1046
AflIII ACRYGT 2 cut(s) 235, 748
AgsI TTSAA 9 cut(s) 256, 317, 329, 507, 548, 648, 683, 877, 1027
AjnI CCWGG 3 cut(s) 30, 292, 997
AloI GAACNNNNNNTCC 2 cut(s) 598, 630
AluBI AGCT 3 cut(s) 727, 851, 910
AluI AGCT 3 cut(s) 727, 851, 910
Alw26I GTCTC 3 cut(s) 243, 756, 1112
AlwI GGATC 2 cut(s) 1092, 1101
AoxI GGCC 1 cut(s) 588
ApeKI GCWGC 5 cut(s) 194, 289, 494, 639, 980
AspLEI GCGC 4 cut(s) 199, 486, 657, 1004
AsuC2I CCSGG 2 cut(s) 445, 828
AsuHPI GGTGA 3 cut(s) 290, 762, 869
AxyI CCTNAGG 1 cut(s) 894
BaeI ACNNNNGTAYC 2 cut(s) 822, 855
BanI GGYRCC 1 cut(s) 176
BbsI GAAGAC 1 cut(s) 105
BbvCI CCTCAGC 1 cut(s) 987
BbvI GCAGC 5 cut(s) 181, 301, 481, 626, 967
BccI CCATC 5 cut(s) 629, 697, 782, 850, 912
BceAI ACGGC 1 cut(s) 242
BcgI CGANNNNNNTGC 2 cut(s) 476, 510
BciT130I CCWGG 3 cut(s) 32, 294, 999
BcnI CCSGG 2 cut(s) 445, 828
BcoDI GTCTC 3 cut(s) 243, 756, 1112
BfaI CTAG 1 cut(s) 926
BfmI CTRYAG 1 cut(s) 79
BisI GCNGC 6 cut(s) 195, 290, 495, 640, 658, 981
BlsI GCNGC 6 cut(s) 196, 291, 496, 641, 659, 982
Bme1390I CCNGG 5 cut(s) 32, 294, 445, 828, 999
BmiI GGNNCC 3 cut(s) 178, 891, 900
BmrFI CCNGG 5 cut(s) 32, 294, 445, 828, 999
BmsI GCATC 2 cut(s) 343, 1009
BpiI GAAGAC 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 288, 320
BpmI CTGGAG 2 cut(s) 315, 1068
Bpu10I CCTNAGC 1 cut(s) 987
BpuEI CTTGAG 1 cut(s) 290
BpuMI CCSGG 2 cut(s) 445, 828
Bsa29I ATCGAT 1 cut(s) 1096
BsaHI GRCGYC 1 cut(s) 102
BsaI GGTCTC 2 cut(s) 756, 1112
BsaJI CCNNGG 5 cut(s) 742, 801, 882, 997, 1101
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 2 cut(s) 998, 1046
Bse118I RCCGGY 1 cut(s) 976
Bse1I ACTGG 2 cut(s) 127, 1051
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 3 cut(s) 32, 294, 999
BseCI ATCGAT 1 cut(s) 1096
BseDI CCNNGG 5 cut(s) 742, 801, 882, 997, 1101
BseGI GGATG 4 cut(s) 471, 689, 1024, 1036
BseLI CCNNNNNNNGG 2 cut(s) 998, 1046
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 3 cut(s) 881, 908, 1001
BseNI ACTGG 2 cut(s) 127, 1051
BseRI GAGGAG 5 cut(s) 582, 611, 882, 975, 1065
BseXI GCAGC 5 cut(s) 181, 301, 481, 626, 967
Bsh1236I CGCG 2 cut(s) 107, 486
BshFI GGCC 1 cut(s) 590
BshNI GGYRCC 1 cut(s) 176
BshVI ATCGAT 1 cut(s) 1096
BsiSI CCGG 5 cut(s) 180, 444, 591, 828, 977
BslI CCNNNNNNNGG 2 cut(s) 998, 1046
BsmAI GTCTC 3 cut(s) 243, 756, 1112
BsmI GAATGC 1 cut(s) 486
BsnI GGCC 1 cut(s) 590
Bso31I GGTCTC 2 cut(s) 756, 1112
Bsp1407I TGTACA 2 cut(s) 232, 576
Bsp143I GATC 4 cut(s) 240, 708, 1093, 1097
Bsp19I CCATGG 2 cut(s) 742, 882
Bsp68I TCGCGA 1 cut(s) 107
BspACI CCGC 2 cut(s) 617, 658
BspANI GGCC 1 cut(s) 590
BspCNI CTCAG 3 cut(s) 880, 907, 1000
BspDI ATCGAT 1 cut(s) 1096
BspFNI CGCG 2 cut(s) 107, 486
BspLI GGNNCC 3 cut(s) 178, 891, 900
BspPI GGATC 2 cut(s) 1092, 1101
BspT107I GGYRCC 1 cut(s) 176
BspTNI GGTCTC 2 cut(s) 756, 1112
BsrBI CCGCTC 1 cut(s) 660
BsrDI GCAATG 1 cut(s) 400
BsrFI RCCGGY 1 cut(s) 976
BsrGI TGTACA 2 cut(s) 232, 576
BsrI ACTGG 2 cut(s) 127, 1051
BssAI RCCGGY 1 cut(s) 976
BssECI CCNNGG 5 cut(s) 742, 801, 882, 997, 1101
BssMI GATC 4 cut(s) 240, 708, 1093, 1097
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 3 cut(s) 742, 882, 1101
Bst2UI CCWGG 3 cut(s) 32, 294, 999
Bst4CI ACNGT 7 cut(s) 408, 532, 722, 857, 934, 1063, 1112
BstACI GRCGYC 1 cut(s) 102
BstAUI TGTACA 2 cut(s) 232, 576
BstC8I GCNNGC 3 cut(s) 201, 974, 978
BstDEI CTNAG 6 cut(s) 418, 867, 894, 987, 1088, 1125
BstDSI CCRYGG 2 cut(s) 742, 882
BstF5I GGATG 4 cut(s) 471, 689, 1024, 1036
BstFNI CGCG 2 cut(s) 107, 486
BstHHI GCGC 4 cut(s) 199, 486, 657, 1004
BstKTI GATC 4 cut(s) 243, 711, 1096, 1100
BstMAI GTCTC 3 cut(s) 243, 756, 1112
BstMBI GATC 4 cut(s) 240, 708, 1093, 1097
BstMWI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
BstNI CCWGG 3 cut(s) 32, 294, 999
BstNSI RCATGY 3 cut(s) 239, 752, 976
BstSCI CCNGG 5 cut(s) 30, 292, 443, 826, 997
BstSFI CTRYAG 1 cut(s) 79
BstUI CGCG 2 cut(s) 107, 486
BstV1I GCAGC 5 cut(s) 181, 301, 481, 626, 967
BstV2I GAAGAC 1 cut(s) 105
Bsu15I ATCGAT 1 cut(s) 1096
Bsu36I CCTNAGG 1 cut(s) 894
BsuRI GGCC 1 cut(s) 590
BsuTUI ATCGAT 1 cut(s) 1096
BtgI CCRYGG 2 cut(s) 742, 882
BtgZI GCGATG 1 cut(s) 648
BtsCI GGATG 4 cut(s) 471, 689, 1024, 1036
BtsIMutI CAGTG 1 cut(s) 537
BtuMI TCGCGA 1 cut(s) 107
Cac8I GCNNGC 3 cut(s) 201, 974, 978
CfoI GCGC 4 cut(s) 199, 486, 657, 1004
Cfr10I RCCGGY 1 cut(s) 976
ClaI ATCGAT 1 cut(s) 1096
Csp6I GTAC 4 cut(s) 233, 577, 824, 839
CviAII CATG 6 cut(s) 236, 734, 743, 749, 883, 973
CviQI GTAC 4 cut(s) 233, 577, 824, 839
DdeI CTNAG 6 cut(s) 418, 867, 894, 987, 1088, 1125
DpnI GATC 4 cut(s) 242, 710, 1095, 1099
DpnII GATC 4 cut(s) 240, 708, 1093, 1097
Eco130I CCWWGG 3 cut(s) 742, 882, 1101
Eco31I GGTCTC 2 cut(s) 756, 1112
Eco32I GATATC 1 cut(s) 439
Eco81I CCTNAGG 1 cut(s) 894
EcoRII CCWGG 3 cut(s) 30, 292, 997
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 3 cut(s) 742, 882, 1101
ErhI CCWWGG 3 cut(s) 742, 882, 1101
FaeI CATG 6 cut(s) 239, 737, 746, 752, 886, 976
FalI AAGNNNNNCTT 2 cut(s) 1024, 1056
FatI CATG 6 cut(s) 235, 733, 742, 748, 882, 972
FauNDI CATATG 1 cut(s) 610
Fnu4HI GCNGC 6 cut(s) 195, 290, 495, 640, 658, 981
FokI GGATG 4 cut(s) 458, 676, 1023, 1031
Fsp4HI GCNGC 6 cut(s) 195, 290, 495, 640, 658, 981
FspBI CTAG 1 cut(s) 926
GlaI GCGC 4 cut(s) 198, 485, 656, 1003
GluI GCNGC 6 cut(s) 195, 290, 495, 640, 658, 981
GsuI CTGGAG 2 cut(s) 315, 1068
HaeIII GGCC 1 cut(s) 590
HapII CCGG 5 cut(s) 180, 444, 591, 828, 977
HhaI GCGC 4 cut(s) 199, 486, 657, 1004
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 6 cut(s) 239, 737, 746, 752, 886, 976
Hin6I GCGC 4 cut(s) 197, 484, 655, 1002
HinP1I GCGC 4 cut(s) 197, 484, 655, 1002
HinfI GANTC 1 cut(s) 344
HpaII CCGG 5 cut(s) 180, 444, 591, 828, 977
HphI GGTGA 3 cut(s) 290, 762, 869
Hpy166II GTNNAC 2 cut(s) 233, 281
Hpy188I TCNGA 5 cut(s) 118, 436, 566, 953, 1075
Hpy188III TCNNGA 2 cut(s) 106, 326
Hpy8I GTNNAC 2 cut(s) 233, 281
Hpy99I CGWCG 2 cut(s) 107, 142
HpyAV CCTTC 4 cut(s) 88, 211, 215, 777
HpyCH4III ACNGT 7 cut(s) 408, 532, 722, 857, 934, 1063, 1112
HpyCH4IV ACGT 2 cut(s) 102, 466
HpyCH4V TGCA 4 cut(s) 289, 497, 737, 961
HpyF10VI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
HpyF3I CTNAG 6 cut(s) 418, 867, 894, 987, 1088, 1125
HpySE526I ACGT 2 cut(s) 102, 466
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 6 cut(s) 239, 737, 746, 752, 886, 976
HspAI GCGC 4 cut(s) 197, 484, 655, 1002
KroI GCCGGC 1 cut(s) 976
KroNI GCCGGC 1 cut(s) 978
Kzo9I GATC 4 cut(s) 240, 708, 1093, 1097
LmnI GCTCC 3 cut(s) 619, 895, 988
Lsp1109I GCAGC 5 cut(s) 181, 301, 481, 626, 967
LweI GCATC 2 cut(s) 343, 1009
MaeI CTAG 1 cut(s) 926
MaeII ACGT 2 cut(s) 102, 466
MaeIII GTNAC 2 cut(s) 532, 1106
MalI GATC 4 cut(s) 242, 710, 1095, 1099
MbiI CCGCTC 1 cut(s) 660
MboI GATC 4 cut(s) 240, 708, 1093, 1097
MboII GAAGA 6 cut(s) 49, 103, 110, 341, 560, 1076
MluCI AATT 5 cut(s) 270, 317, 543, 945, 1005
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 2 cut(s) 499, 1098
MroNI GCCGGC 1 cut(s) 976
MseI TTAA 2 cut(s) 914, 1043
MslI CAYNNNNRTG 1 cut(s) 747
MspI CCGG 5 cut(s) 180, 444, 591, 828, 977
MspR9I CCNGG 5 cut(s) 32, 294, 445, 828, 999
Mva1269I GAATGC 1 cut(s) 486
MvaI CCWGG 3 cut(s) 32, 294, 999
MvnI CGCG 2 cut(s) 107, 486
MwoI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
NaeI GCCGGC 1 cut(s) 978
NciI CCSGG 2 cut(s) 445, 828
NcoI CCATGG 2 cut(s) 742, 882
NdeI CATATG 1 cut(s) 610
NdeII GATC 4 cut(s) 240, 708, 1093, 1097
NgoMIV GCCGGC 1 cut(s) 976
NlaIII CATG 6 cut(s) 239, 737, 746, 752, 886, 976
NlaIV GGNNCC 3 cut(s) 178, 891, 900
NmuCI GTSAC 1 cut(s) 532
NruI TCGCGA 1 cut(s) 107
NspI RCATGY 3 cut(s) 239, 752, 976
PaeI GCATGC 1 cut(s) 976
PciI ACATGT 2 cut(s) 235, 748
PctI GAATGC 1 cut(s) 486
PdiI GCCGGC 1 cut(s) 978
PkrI GCNGC 6 cut(s) 196, 291, 496, 641, 659, 982
PleI GAGTC 1 cut(s) 352
PpsI GAGTC 1 cut(s) 352
PscI ACATGT 2 cut(s) 235, 748
Psp6I CCWGG 3 cut(s) 30, 292, 997
PspGI CCWGG 3 cut(s) 30, 292, 997
PspN4I GGNNCC 3 cut(s) 178, 891, 900
RruI TCGCGA 1 cut(s) 107
RsaI GTAC 4 cut(s) 234, 578, 825, 840
RsaNI GTAC 4 cut(s) 233, 577, 824, 839
RseI CAYNNNNRTG 1 cut(s) 747
SaqAI TTAA 2 cut(s) 914, 1043
SatI GCNGC 6 cut(s) 195, 290, 495, 640, 658, 981
Sau3AI GATC 4 cut(s) 240, 708, 1093, 1097
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 5 cut(s) 32, 294, 445, 828, 999
SetI ASST 8 cut(s) 80, 105, 469, 729, 807, 853, 900, 912
SfaNI GCATC 2 cut(s) 343, 1009
SfcI CTRYAG 1 cut(s) 79
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
SphI GCATGC 1 cut(s) 976
Sse9I AATT 5 cut(s) 270, 317, 543, 945, 1005
SsiI CCGC 2 cut(s) 617, 658
SspI AATATT 1 cut(s) 679
SspMI CTAG 1 cut(s) 926
StyD4I CCNGG 5 cut(s) 30, 292, 443, 826, 997
StyI CCWWGG 3 cut(s) 742, 882, 1101
TaaI ACNGT 7 cut(s) 408, 532, 722, 857, 934, 1063, 1112
TaiI ACGT 2 cut(s) 105, 469
TaqI TCGA 2 cut(s) 243, 1096
TasI AATT 5 cut(s) 270, 317, 543, 945, 1005
TatI WGTACW 2 cut(s) 232, 576
TauI GCSGC 1 cut(s) 660
Tru1I TTAA 2 cut(s) 914, 1043
Tru9I TTAA 2 cut(s) 914, 1043
TscAI CASTG 1 cut(s) 537
TseFI GTSAC 1 cut(s) 532
TseI GCWGC 5 cut(s) 194, 289, 494, 639, 980
Tsp45I GTSAC 1 cut(s) 532
TspDTI ATGAA 2 cut(s) 27, 460
TspGWI ACGGA 1 cut(s) 155
TspRI CASTG 1 cut(s) 537
XceI RCATGY 3 cut(s) 239, 752, 976
XspI CTAG 1 cut(s) 926
ZraI GACGTC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.