RLG00000015244

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000108
Physical Location & Seq
Forward (+)
63534782 .. 63537178
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015244

Sequence Viewer

Length: 1329 bp
ATGGAGGAAGAGAAAAGTACAGATGTCGTCATTGTCGGCGCCGGATTTATCACCAACAACCCAGAACTTCTAGCATTTTTTTATTTTTATGCTCATGCTTTTAAGGAAGGACGCCGTGTACATGTCACAAGAGACTTGAGTGAGCCAGATAGAATTGTTGGGGAGCTGTTGGAGCCTGGGGGCTATCTCAAATTGATTGAGTTGGGTCTTGAGGGTAAGCAATCACCTTATTCAACTGTGCAAATGAGTCCATTAATTGATGCTCAGAAAGTGTTTCGCTATGCTCTTTACAAAGATGGGAAGGACACAAAACTGTCTTATCCCTTGGAAAAATACGGTTCAGATGTGGCTGGCAGAAGTTTTCACAATGGGCGTTTCATCCAAAGAATGCGTGAAAAAGCTACAACTCTATCTAATGTAAAATTGGAACAGGGATCAGTTACAACACTAATCGAAGAAAAGGGCATTGTCAAAGGTGTAATTTACAAGAACAAGGCTGGAGAGGAGATGAGAACATATGCTCCACTAACAATCGTGTGTGATGGTTCCTTTTCAAATCTGCGCAAATCTCTCAGTGCTCCAAAGGTTGAAAGTCCATCTTGTTTTGTTGGCTTGATCTTGGAGAACTGTGAGCTTCCACACGCAAATCATGGACATGTGATTTTGGGAGACCCTTCCCCATCCTGTTTTATCCTATTAGTTCCACTGAGGTTCGTTGTTTGGTGGATGTACCTGGAACAAAAGTACCTTCAGTTGCTAGTGATTCCGCCTCAGCTCTACAATGCTTTTATGGCTGCTATCAACAAGGAAAATATCAGAACAATGCGAAACAAAAGCATGGCTGCTAATCCTCTTCCCACTCCTGGTGCAATTTTATTGGGGGATTTGTTCAACATGAGGCATCCATTAACAGGAGGAGGAATGACTGTGGCTCTTTCAGACATTGTTCTTCTCCGCATTCTTCTTAGACCTCTACTTGATTTGAATGATGCACCTGCTTTGTGCAACTACCTTGAGTCATTCTACACATTGCATAAGTCTGTGTCATCCACCATAAACACATTGGCAGGTGCTTTGTATAAGGTGTTTTGTGCATCACCTGATCAGCCAAGACAGGAAATGCGTGAAGCCTGTTTCAGCTATTTAAGCCTTGGAGGCATCTGGCCCTTAATGCTTCCCTTCCCTTCACCCAAACGCATGTGGCTTGGGGCTAGATTGATCTCAAGTGGATCAGACATTATATTCCCCATAATAAAGGGGGAAGGAGTTAGACAGATGTTTTTTCCTGCCACAGTGCCAGCATATTACAGATCCCCTCCTATTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

443

Amino Acids

49.43

Weight (kDa)

8.77

Isoelectric Point (pI)

52.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SE PF08491 174 - 228 1.2e-18 Squalene epoxidase
SE PF08491 254 - 388 2.4e-48 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1003, 1058
Acc16I TGCGCA 1 cut(s) 563
Acc36I ACCTGC 2 cut(s) 1003, 1058
AccB1I GGYRCC 1 cut(s) 38
AciI CCGC 2 cut(s) 767, 955
AclWI GGATC 3 cut(s) 442, 1237, 1305
AcuI CTGAAG 1 cut(s) 734
AcyI GRCGYC 2 cut(s) 39, 112
AfaI GTAC 4 cut(s) 19, 120, 731, 746
AfiI CCNNNNNNNGG 2 cut(s) 863, 911
AflIII ACRYGT 2 cut(s) 121, 655
AgsI TTSAA 5 cut(s) 234, 555, 590, 892, 985
AjnI CCWGG 3 cut(s) 175, 732, 862
AloI GAACNNNNNNTCC 2 cut(s) 505, 537
AluBI AGCT 5 cut(s) 166, 401, 634, 775, 1140
AluI AGCT 5 cut(s) 166, 401, 634, 775, 1140
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 2 cut(s) 126, 663
AlwI GGATC 3 cut(s) 442, 1237, 1305
AoxI GGCC 1 cut(s) 1163
ApeKI GCWGC 2 cut(s) 794, 842
AseI ATTAAT 1 cut(s) 254
AspLEI GCGC 2 cut(s) 41, 564
AspS9I GGNCC 1 cut(s) 1164
AsuHPI GGTGA 4 cut(s) 43, 216, 1089, 1179
BaeI ACNNNNGTAYC 2 cut(s) 728, 761
BanI GGYRCC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 580
BbvCI CCTCAGC 1 cut(s) 771
BbvI GCAGC 2 cut(s) 781, 829
BccI CCATC 4 cut(s) 290, 536, 604, 688
BceAI ACGGC 1 cut(s) 99
BciT130I CCWGG 3 cut(s) 177, 734, 864
BclI TGATCA 1 cut(s) 1102
BcoDI GTCTC 2 cut(s) 126, 663
BfaI CTAG 3 cut(s) 71, 758, 1212
BfoI RGCGCY 1 cut(s) 42
BfuAI ACCTGC 2 cut(s) 1003, 1058
BglI GCCNNNNNGGC 1 cut(s) 1155
BisI GCNGC 2 cut(s) 795, 843
BlsI GCNGC 2 cut(s) 796, 844
Bme1390I CCNGG 3 cut(s) 177, 734, 864
BmgT120I GGNCC 1 cut(s) 1164
BmiI GGNNCC 3 cut(s) 40, 174, 547
BmrFI CCNGG 3 cut(s) 177, 734, 864
BmsI GCATC 5 cut(s) 250, 910, 979, 1103, 1167
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 771
BpuEI CTTGAG 4 cut(s) 157, 230, 1034, 1207
BsaHI GRCGYC 2 cut(s) 39, 112
BsaI GGTCTC 1 cut(s) 663
BsaJI CCNNGG 3 cut(s) 176, 324, 1150
BsaXI ACNNNNNCTCC 2 cut(s) 505, 535
Bsc4I CCNNNNNNNGG 2 cut(s) 863, 911
Bse3DI GCAATG 1 cut(s) 1028
BseBI CCWGG 3 cut(s) 177, 734, 864
BseDI CCNNGG 3 cut(s) 176, 324, 1150
BseGI GGATG 5 cut(s) 378, 680, 732, 901, 1046
BseLI CCNNNNNNNGG 2 cut(s) 863, 911
BseMI GCAATG 1 cut(s) 1028
BseMII CTCAG 4 cut(s) 278, 586, 698, 785
BseRI GAGGAG 2 cut(s) 518, 930
BseXI GCAGC 2 cut(s) 781, 829
BshFI GGCC 1 cut(s) 1165
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 580
BsiSI CCGG 1 cut(s) 42
BslI CCNNNNNNNGG 2 cut(s) 863, 911
BsmAI GTCTC 2 cut(s) 126, 663
BsmI GAATGC 2 cut(s) 393, 957
BsnI GGCC 1 cut(s) 1165
Bso31I GGTCTC 1 cut(s) 663
Bsp1286I GDGCHC 1 cut(s) 580
Bsp1407I TGTACA 1 cut(s) 118
Bsp143I GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
BspACI CCGC 2 cut(s) 767, 955
BspANI GGCC 1 cut(s) 1165
BspCNI CTCAG 4 cut(s) 277, 585, 699, 784
BspLI GGNNCC 3 cut(s) 40, 174, 547
BspMI ACCTGC 2 cut(s) 1003, 1058
BspPI GGATC 3 cut(s) 442, 1237, 1305
BspT107I GGYRCC 1 cut(s) 38
BspTNI GGTCTC 1 cut(s) 663
BsrDI GCAATG 1 cut(s) 1028
BsrGI TGTACA 1 cut(s) 118
BssECI CCNNGG 3 cut(s) 176, 324, 1150
BssMI GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
BssNI GRCGYC 2 cut(s) 39, 112
BssT1I CCWWGG 2 cut(s) 324, 1150
Bst2UI CCWGG 3 cut(s) 177, 734, 864
Bst4CI ACNGT 6 cut(s) 238, 315, 338, 629, 928, 1294
Bst6I CTCTTC 2 cut(s) 3, 858
BstACI GRCGYC 2 cut(s) 39, 112
BstAUI TGTACA 1 cut(s) 118
BstC8I GCNNGC 2 cut(s) 352, 1299
BstDEI CTNAG 5 cut(s) 264, 572, 707, 771, 965
BstF5I GGATG 5 cut(s) 378, 680, 732, 901, 1046
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 2 cut(s) 41, 564
BstKTI GATC 6 cut(s) 437, 618, 1105, 1221, 1232, 1313
BstMAI GTCTC 2 cut(s) 126, 663
BstMBI GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
BstMWI GCNNNNNNNGC 5 cut(s) 172, 791, 1146, 1155, 1171
BstNI CCWGG 3 cut(s) 177, 734, 864
BstNSI RCATGY 3 cut(s) 125, 659, 1201
BstSCI CCNGG 3 cut(s) 175, 732, 862
BstV1I GCAGC 2 cut(s) 781, 829
BstX2I RGATCY 1 cut(s) 1310
BstYI RGATCY 1 cut(s) 1310
BsuRI GGCC 1 cut(s) 1165
BtsCI GGATG 5 cut(s) 378, 680, 732, 901, 1046
BtsIMutI CAGTG 3 cut(s) 580, 704, 1299
BveI ACCTGC 2 cut(s) 1003, 1058
Cac8I GCNNGC 2 cut(s) 352, 1299
CfoI GCGC 2 cut(s) 41, 564
Cfr13I GGNCC 1 cut(s) 1164
CseI GACGC 1 cut(s) 120
Csp6I GTAC 4 cut(s) 18, 119, 730, 745
CviAII CATG 7 cut(s) 95, 122, 650, 656, 838, 895, 1198
CviQI GTAC 4 cut(s) 18, 119, 730, 745
DdeI CTNAG 5 cut(s) 264, 572, 707, 771, 965
DinI GGCGCC 1 cut(s) 40
DpnI GATC 6 cut(s) 436, 617, 1104, 1220, 1231, 1312
DpnII GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
Eam1104I CTCTTC 2 cut(s) 3, 858
EarI CTCTTC 2 cut(s) 3, 858
EciI GGCGGA 1 cut(s) 756
Eco130I CCWWGG 2 cut(s) 324, 1150
Eco31I GGTCTC 1 cut(s) 663
Eco57I CTGAAG 1 cut(s) 734
EcoRII CCWGG 3 cut(s) 175, 732, 862
EcoT14I CCWWGG 2 cut(s) 324, 1150
EgeI GGCGCC 1 cut(s) 40
EheI GGCGCC 1 cut(s) 40
ErhI CCWWGG 2 cut(s) 324, 1150
FaeI CATG 7 cut(s) 98, 125, 653, 659, 841, 898, 1201
FalI AAGNNNNNCTT 2 cut(s) 583, 615
FatI CATG 7 cut(s) 94, 121, 649, 655, 837, 894, 1197
FauNDI CATATG 1 cut(s) 517
FbaI TGATCA 1 cut(s) 1102
Fnu4HI GCNGC 2 cut(s) 795, 843
FokI GGATG 5 cut(s) 365, 667, 739, 888, 1033
Fsp4HI GCNGC 2 cut(s) 795, 843
FspBI CTAG 3 cut(s) 71, 758, 1212
FspI TGCGCA 1 cut(s) 563
GlaI GCGC 2 cut(s) 40, 563
GluI GCNGC 2 cut(s) 795, 843
GsuI CTGGAG 1 cut(s) 519
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 1 cut(s) 1165
HapII CCGG 1 cut(s) 42
HgaI GACGC 1 cut(s) 120
HhaI GCGC 2 cut(s) 41, 564
Hin1I GRCGYC 2 cut(s) 39, 112
Hin1II CATG 7 cut(s) 98, 125, 653, 659, 841, 898, 1201
Hin6I GCGC 2 cut(s) 39, 562
HinP1I GCGC 2 cut(s) 39, 562
HinfI GANTC 3 cut(s) 247, 763, 1016
HpaII CCGG 1 cut(s) 42
HphI GGTGA 4 cut(s) 43, 216, 1089, 1179
Hpy166II GTNNAC 1 cut(s) 119
Hpy188I TCNGA 5 cut(s) 267, 343, 818, 940, 1234
Hpy188III TCNNGA 1 cut(s) 209
Hpy8I GTNNAC 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 101, 295, 684, 758, 1189, 1194, 1256
HpyCH4III ACNGT 6 cut(s) 238, 315, 338, 629, 928, 1294
HpyCH4V TGCA 6 cut(s) 241, 869, 992, 1005, 1033, 1094
HpyF10VI GCNNNNNNNGC 5 cut(s) 172, 791, 1146, 1155, 1171
HpyF3I CTNAG 5 cut(s) 264, 572, 707, 771, 965
Hsp92I GRCGYC 2 cut(s) 39, 112
Hsp92II CATG 7 cut(s) 98, 125, 653, 659, 841, 898, 1201
HspAI GCGC 2 cut(s) 39, 562
KasI GGCGCC 1 cut(s) 38
Ksp22I TGATCA 1 cut(s) 1102
Kzo9I GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
LmnI GCTCC 4 cut(s) 163, 172, 526, 583
Lsp1109I GCAGC 2 cut(s) 781, 829
LweI GCATC 5 cut(s) 250, 910, 979, 1103, 1167
MaeI CTAG 3 cut(s) 71, 758, 1212
MaeIII GTNAC 2 cut(s) 124, 439
MalI GATC 6 cut(s) 436, 617, 1104, 1220, 1231, 1312
MboI GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
MboII GAAGA 5 cut(s) 20, 467, 845, 941, 953
MflI RGATCY 1 cut(s) 1310
MhlI GDGCHC 1 cut(s) 580
MluCI AATT 6 cut(s) 153, 191, 255, 422, 480, 870
Mly113I GGCGCC 1 cut(s) 39
MlyI GAGTC 2 cut(s) 256, 1025
MmeI TCCRAC 1 cut(s) 150
MseI TTAA 5 cut(s) 102, 254, 908, 1145, 1169
MslI CAYNNNNRTG 1 cut(s) 654
MspI CCGG 1 cut(s) 42
MspR9I CCNGG 3 cut(s) 177, 734, 864
Mva1269I GAATGC 2 cut(s) 393, 957
MvaI CCWGG 3 cut(s) 177, 734, 864
MwoI GCNNNNNNNGC 5 cut(s) 172, 791, 1146, 1155, 1171
NarI GGCGCC 1 cut(s) 39
NdeI CATATG 1 cut(s) 517
NdeII GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
NlaIII CATG 7 cut(s) 98, 125, 653, 659, 841, 898, 1201
NlaIV GGNNCC 3 cut(s) 40, 174, 547
NmuCI GTSAC 1 cut(s) 124
NsbI TGCGCA 1 cut(s) 563
NspI RCATGY 3 cut(s) 125, 659, 1201
PaqCI CACCTGC 2 cut(s) 1003, 1058
PciI ACATGT 2 cut(s) 121, 655
PctI GAATGC 2 cut(s) 393, 957
PfeI GAWTC 1 cut(s) 763
PkrI GCNGC 2 cut(s) 796, 844
PleI GAGTC 2 cut(s) 255, 1024
PluTI GGCGCC 1 cut(s) 42
PpsI GAGTC 2 cut(s) 255, 1024
PscI ACATGT 2 cut(s) 121, 655
PshBI ATTAAT 1 cut(s) 254
Psp6I CCWGG 3 cut(s) 175, 732, 862
PspGI CCWGG 3 cut(s) 175, 732, 862
PspN4I GGNNCC 3 cut(s) 40, 174, 547
PspPI GGNCC 1 cut(s) 1164
PsuI RGATCY 1 cut(s) 1310
RsaI GTAC 4 cut(s) 19, 120, 731, 746
RsaNI GTAC 4 cut(s) 18, 119, 730, 745
RseI CAYNNNNRTG 1 cut(s) 654
SaqAI TTAA 5 cut(s) 102, 254, 908, 1145, 1169
SatI GCNGC 2 cut(s) 795, 843
Sau3AI GATC 6 cut(s) 434, 615, 1102, 1218, 1229, 1310
Sau96I GGNCC 1 cut(s) 1164
SchI GAGTC 2 cut(s) 256, 1025
ScrFI CCNGG 3 cut(s) 177, 734, 864
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 5 cut(s) 250, 910, 979, 1103, 1167
SfoI GGCGCC 1 cut(s) 40
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 4 cut(s) 136, 209, 1013, 1222
SmoI CTYRAG 4 cut(s) 136, 209, 1013, 1222
Sse9I AATT 6 cut(s) 153, 191, 255, 422, 480, 870
SsiI CCGC 2 cut(s) 767, 955
SspDI GGCGCC 1 cut(s) 38
SspMI CTAG 3 cut(s) 71, 758, 1212
StyD4I CCNGG 3 cut(s) 175, 732, 862
StyI CCWWGG 2 cut(s) 324, 1150
TaaI ACNGT 6 cut(s) 238, 315, 338, 629, 928, 1294
TaqI TCGA 1 cut(s) 453
TasI AATT 6 cut(s) 153, 191, 255, 422, 480, 870
TatI WGTACW 2 cut(s) 17, 118
TfiI GAWTC 1 cut(s) 763
Tru1I TTAA 5 cut(s) 102, 254, 908, 1145, 1169
Tru9I TTAA 5 cut(s) 102, 254, 908, 1145, 1169
TscAI CASTG 3 cut(s) 580, 711, 1299
TseFI GTSAC 1 cut(s) 124
TseI GCWGC 2 cut(s) 794, 842
Tsp45I GTSAC 1 cut(s) 124
TspDTI ATGAA 2 cut(s) 367, 1313
TspRI CASTG 3 cut(s) 580, 711, 1299
VspI ATTAAT 1 cut(s) 254
XceI RCATGY 3 cut(s) 125, 659, 1201
XcmI CCANNNNNNNNNTGG 1 cut(s) 1060
XspI CTAG 3 cut(s) 71, 758, 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.