MD02G1272900.v1.1

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000108
Physical Location & Seq
Reverse (-)
32713812 .. 32716934
3123 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1272900.v1.1.491

Sequence Viewer

Length: 1659 bp
ATGGTTTATGAGTATGTTCTTGCTGCCGTCTTGGTTTCTTTGTTGAGTTCTGTTTTCTTCGTCTTCATAAACACCACCTACGGGGACAAGAAGGACGATGACGTCGCGAATGTTTCAGCAACCGGTGTTTTTCTGACGCCGGAGATTGAGAAAAGTACTGATGTTGTCATTGTCGGTGCCGGAGTTGCTGGTGCTGCTCTTGCTTACACTCTTGGGAAGGAAGGACGGCGGGTACATGTGATCGAAAGAGACTTGAGCGAGCCGGACAGAATTGTTGGTGAACTCTTGCAGCCTGGAGGCTATCTCAAGTTGATTGAATTAGGTCTTGAGGATTGTGCTAATGACTCCATTGATGCTGAGAAAGTGTTTGGCTATGCCCTTTACAAAAATGGCAATGACACAAAACTGTCATATCCCTTGGAAACATATAGTTCAGAGATAGCGGGAAGAAGTTTTCACAACGGGCGTTTCATCCAAAGAATGCGCGAAAGGGCCGCAGCTCTTCCAAATGTGAAACTGGAACAAGGAACAGTTACTACACTTCTTGAAGAAAAGGGCACCATCCAAGGAGTGATGTACAAGAACAAGGCAGGAGAGGAGATGATAACATATGCTCCCCTAACAATAGTATGCGATGGCTGCTTTTCAAATCTGCGCCGCTCTATCTCTTCTCCAAATATTGAAAATCCGTCCTGCTTTGTCGGGTTGATCTTGGAGAACTGTGAGCTTCCTCATGCAAACCATGGACATGTGATCTTGGGAGACCCTTCACCTATCCTGTTTTATCCTATTAGTAGCACCGAGGTTCGTTGTTTGGTAGATGTACCCGGCACAAAAATACCTTCAGTAGCTAACGGCGAAATGGCTCAGTATTTGAAAACTGTCGTGGCTCCTCAGGTTCCCCATCAACTCTCAAAGGCTTTTCTAGCAGCGGTTGATAAAGGAATCATTAGAACAATGCAAAACAAAAGCATGCCTGCTGCTCCTCAACCCACACCTGGTGCAATTTTATTGGGGGATGCATTCAACATGAGACATCCTTTAACTGGAGGAGGAATGACTGTCGCTCTTTCCGACATTGTTCTTCTTAGAGATCTTCTGAGACCGCTAAGTGATTTCAATGATGCACCTGCTTTGTGCAATTATCTCGAATCATTCTACACACTGCGTAAGCCTGTGTCATCTACCATAAACACATTGGCCGGTGCTCTTTACAAGGTGTTTTGTACGTCGCCTGACCCCGCAAGACAAGAAATGCGTGAAGCTTGTTTTGATTATTTGAGCCTCGGGGGCGTCTGTTCAAACGGCCCAATATCTCTACTCTCCGGTCTTAATCCTCGTCCGATCAGCCTCTTTCTCCATTTCTTTGCTGTTGCTGTGTATGGAGTCGGCCGCTTAATGATTCCATTCCCTACACCAAAACGCCTGTGGTTGGGGGCTAGATTGATCTTGGTATGTTTACAGATGATCTTCCCAAGTGCATCAGGAATCATATTCCCAATTATTAAAGCCGAAGGAGTTAGACAAATGTTCTTTCCCGCAACAATGCCAGCATATTACAGAGTTCCACCCGTTCGTACAAAAATCGAAACAAGCACGAAGTATACACTACGATCAACTAATTTATATCGAATCAGCGGTTGTCTTCACAAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

553

Amino Acids

60.33

Weight (kDa)

8.15

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 53 - 364 6.5e-17 FAD binding domain
DAO PF01266 54 - 84 1.1e-06 FAD dependent oxidoreductase
SE PF08491 205 - 477 3e-119 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1138
AasI GACNNNNNNGTC 1 cut(s) 101
AatII GACGTC 1 cut(s) 105
Acc36I ACCTGC 1 cut(s) 1138
AccB1I GGYRCC 2 cut(s) 176, 557
AccBSI CCGCTC 1 cut(s) 660
AccI GTMKAC 1 cut(s) 1604
AccII CGCG 2 cut(s) 107, 486
AcoI YGGCCR 2 cut(s) 1200, 1390
AcuI CTGAAG 1 cut(s) 828
AcyI GRCGYC 3 cut(s) 102, 137, 1293
AdeI CACNNNGTG 1 cut(s) 1001
AfaI GTAC 6 cut(s) 157, 234, 578, 825, 1228, 1579
AfiI CCNNNNNNNGG 4 cut(s) 81, 998, 1046, 1432
AflIII ACRYGT 2 cut(s) 235, 748
AgeI ACCGGT 1 cut(s) 122
AgsI TTSAA 8 cut(s) 317, 548, 648, 683, 877, 1027, 1120, 1302
AjnI CCWGG 2 cut(s) 292, 997
AluBI AGCT 4 cut(s) 500, 727, 851, 1265
AluI AGCT 4 cut(s) 500, 727, 851, 1265
Alw21I GWGCWC 1 cut(s) 1210
Alw26I GTCTC 4 cut(s) 243, 756, 1027, 1096
Ama87I CYCGRG 1 cut(s) 1286
AoxI GGCC 4 cut(s) 492, 1200, 1306, 1390
ApeKI GCWGC 7 cut(s) 23, 194, 289, 497, 639, 929, 980
AsiGI ACCGGT 1 cut(s) 122
AspLEI GCGC 2 cut(s) 486, 657
AspS9I GGNCC 2 cut(s) 492, 1307
AsuC2I CCSGG 1 cut(s) 828
AsuHPI GGTGA 2 cut(s) 290, 762
AvaI CYCGRG 1 cut(s) 1286
AxyI CCTNAGG 1 cut(s) 894
BaeGI GKGCMC 1 cut(s) 560
BanI GGYRCC 2 cut(s) 176, 557
BbsI GAAGAC 2 cut(s) 55, 1637
Bbv12I GWGCWC 1 cut(s) 1210
BbvI GCAGC 7 cut(s) 10, 181, 301, 509, 626, 941, 967
BccI CCATC 3 cut(s) 569, 629, 912
BceAI ACGGC 4 cut(s) 11, 242, 871, 1321
BcgI CGANNNNNNTGC 2 cut(s) 1129, 1163
BciT130I CCWGG 2 cut(s) 294, 999
BcnI CCSGG 1 cut(s) 828
BcoDI GTCTC 4 cut(s) 243, 756, 1027, 1096
BfaI CTAG 2 cut(s) 926, 1440
BfuAI ACCTGC 1 cut(s) 1138
BglI GCCNNNNNGGC 1 cut(s) 1290
BglII AGATCT 1 cut(s) 1093
BmcAI AGTACT 1 cut(s) 157
Bme1390I CCNGG 3 cut(s) 294, 828, 999
BmeT110I CYCGRG 1 cut(s) 1286
BmgT120I GGNCC 2 cut(s) 492, 1307
BmiI GGNNCC 4 cut(s) 178, 559, 891, 900
BmrFI CCNGG 3 cut(s) 294, 828, 999
BmsI GCATC 4 cut(s) 343, 1009, 1114, 1490
BpiI GAAGAC 2 cut(s) 55, 1637
BplI GAGNNNNNCTC 2 cut(s) 288, 320
BpmI CTGGAG 2 cut(s) 315, 1068
BpuEI CTTGAG 3 cut(s) 274, 290, 347
BpuMI CCSGG 1 cut(s) 828
BsaHI GRCGYC 3 cut(s) 102, 137, 1293
BsaI GGTCTC 2 cut(s) 756, 1096
BsaJI CCNNGG 5 cut(s) 417, 565, 742, 801, 1285
BsaWI WCCGGW 2 cut(s) 122, 1325
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 4 cut(s) 81, 998, 1046, 1432
Bse118I RCCGGY 2 cut(s) 122, 1202
Bse1I ACTGG 2 cut(s) 522, 1051
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 2 cut(s) 294, 999
BseDI CCNNGG 5 cut(s) 417, 565, 742, 801, 1285
BseGI GGATG 4 cut(s) 471, 561, 1024, 1036
BseLI CCNNNNNNNGG 4 cut(s) 81, 998, 1046, 1432
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 4 cut(s) 348, 881, 908, 1091
BseNI ACTGG 2 cut(s) 522, 1051
BseRI GAGGAG 4 cut(s) 611, 882, 975, 1065
BseSI GKGCMC 1 cut(s) 560
BseX3I CGGCCG 1 cut(s) 1390
BseXI GCAGC 7 cut(s) 10, 181, 301, 509, 626, 941, 967
Bsh1236I CGCG 2 cut(s) 107, 486
Bsh1285I CGRYCG 1 cut(s) 1393
BshFI GGCC 4 cut(s) 494, 1202, 1308, 1392
BshNI GGYRCC 2 cut(s) 176, 557
BshTI ACCGGT 1 cut(s) 122
BsiEI CGRYCG 1 cut(s) 1393
BsiHKAI GWGCWC 1 cut(s) 1210
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 7 cut(s) 123, 140, 180, 263, 828, 1203, 1326
BslFI GGGAC 1 cut(s) 98
BslI CCNNNNNNNGG 4 cut(s) 81, 998, 1046, 1432
BsmAI GTCTC 4 cut(s) 243, 756, 1027, 1096
BsmFI GGGAC 1 cut(s) 98
BsmI GAATGC 2 cut(s) 486, 1022
BsnI GGCC 4 cut(s) 494, 1202, 1308, 1392
Bso31I GGTCTC 2 cut(s) 756, 1096
BsoBI CYCGRG 1 cut(s) 1286
Bsp1286I GDGCHC 2 cut(s) 560, 1210
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
Bsp19I CCATGG 1 cut(s) 742
Bsp68I TCGCGA 1 cut(s) 107
BspANI GGCC 4 cut(s) 494, 1202, 1308, 1392
BspCNI CTCAG 4 cut(s) 349, 880, 907, 1092
BspFNI CGCG 2 cut(s) 107, 486
BspLI GGNNCC 4 cut(s) 178, 559, 891, 900
BspMI ACCTGC 1 cut(s) 1138
BspQI GCTCTTC 1 cut(s) 507
BspT107I GGYRCC 2 cut(s) 176, 557
BspTNI GGTCTC 2 cut(s) 756, 1096
BsrBI CCGCTC 1 cut(s) 660
BsrDI GCAATG 1 cut(s) 400
BsrFI RCCGGY 2 cut(s) 122, 1202
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 2 cut(s) 522, 1051
BssAI RCCGGY 2 cut(s) 122, 1202
BssECI CCNNGG 5 cut(s) 417, 565, 742, 801, 1285
BssMI GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
BssNAI GTATAC 1 cut(s) 1605
BssNI GRCGYC 3 cut(s) 102, 137, 1293
BssT1I CCWWGG 3 cut(s) 417, 565, 742
Bst1107I GTATAC 1 cut(s) 1605
Bst2UI CCWGG 2 cut(s) 294, 999
Bst4CI ACNGT 5 cut(s) 408, 532, 722, 883, 1063
Bst6I CTCTTC 2 cut(s) 507, 673
BstACI GRCGYC 3 cut(s) 102, 137, 1293
BstAUI TGTACA 1 cut(s) 576
BstC8I GCNNGC 4 cut(s) 260, 974, 978, 1551
BstDEI CTNAG 6 cut(s) 357, 867, 894, 1088, 1100, 1109
BstDSI CCRYGG 1 cut(s) 742
BstF5I GGATG 4 cut(s) 471, 561, 1024, 1036
BstFNI CGCG 2 cut(s) 107, 486
BstHHI GCGC 2 cut(s) 486, 657
BstKTI GATC 8 cut(s) 243, 711, 756, 1096, 1347, 1449, 1470, 1616
BstMAI GTCTC 4 cut(s) 243, 756, 1027, 1096
BstMBI GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
BstMCI CGRYCG 1 cut(s) 1393
BstMWI GCNNNNNNNGC 6 cut(s) 185, 194, 200, 639, 926, 1290
BstNI CCWGG 2 cut(s) 294, 999
BstNSI RCATGY 3 cut(s) 239, 752, 976
BstSCI CCNGG 3 cut(s) 292, 826, 997
BstSLI GKGCMC 1 cut(s) 560
BstUI CGCG 2 cut(s) 107, 486
BstV1I GCAGC 7 cut(s) 10, 181, 301, 509, 626, 941, 967
BstV2I GAAGAC 2 cut(s) 55, 1637
BstX2I RGATCY 1 cut(s) 1093
BstYI RGATCY 1 cut(s) 1093
BstZ17I GTATAC 1 cut(s) 1605
BstZI CGGCCG 1 cut(s) 1390
Bsu36I CCTNAGG 1 cut(s) 894
BsuRI GGCC 4 cut(s) 494, 1202, 1308, 1392
BtgI CCRYGG 1 cut(s) 742
BtgZI GCGATG 1 cut(s) 648
BtsCI GGATG 4 cut(s) 471, 561, 1024, 1036
BtsI GCAGTG 1 cut(s) 1163
BtsIMutI CAGTG 1 cut(s) 1163
BtuMI TCGCGA 1 cut(s) 107
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 4 cut(s) 260, 974, 978, 1551
CfoI GCGC 2 cut(s) 486, 657
Cfr10I RCCGGY 2 cut(s) 122, 1202
Cfr13I GGNCC 2 cut(s) 492, 1307
CseI GACGC 2 cut(s) 145, 1282
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 6 cut(s) 156, 233, 577, 824, 1227, 1578
CspAI ACCGGT 1 cut(s) 122
CviAII CATG 6 cut(s) 236, 734, 743, 749, 973, 1030
CviQI GTAC 6 cut(s) 156, 233, 577, 824, 1227, 1578
DdeI CTNAG 6 cut(s) 357, 867, 894, 1088, 1100, 1109
DpnI GATC 8 cut(s) 242, 710, 755, 1095, 1346, 1448, 1469, 1615
DpnII GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
DraIII CACNNNGTG 1 cut(s) 1001
DrdI GACNNNNNNGTC 1 cut(s) 101
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 2 cut(s) 1200, 1390
EagI CGGCCG 1 cut(s) 1390
Eam1104I CTCTTC 2 cut(s) 507, 673
EarI CTCTTC 2 cut(s) 507, 673
EclXI CGGCCG 1 cut(s) 1390
Eco130I CCWWGG 3 cut(s) 417, 565, 742
Eco31I GGTCTC 2 cut(s) 756, 1096
Eco52I CGGCCG 1 cut(s) 1390
Eco57I CTGAAG 1 cut(s) 828
Eco81I CCTNAGG 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 1286
EcoRII CCWGG 2 cut(s) 292, 997
EcoT14I CCWWGG 3 cut(s) 417, 565, 742
EcoT22I ATGCAT 1 cut(s) 1024
ErhI CCWWGG 3 cut(s) 417, 565, 742
FaeI CATG 6 cut(s) 239, 737, 746, 752, 976, 1033
FaqI GGGAC 1 cut(s) 98
FatI CATG 6 cut(s) 235, 733, 742, 748, 972, 1029
FauI CCCGC 4 cut(s) 222, 436, 1249, 1546
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 1 cut(s) 1604
FokI GGATG 4 cut(s) 458, 548, 1023, 1031
FspBI CTAG 2 cut(s) 926, 1440
GlaI GCGC 2 cut(s) 485, 656
GsuI CTGGAG 2 cut(s) 315, 1068
HaeIII GGCC 4 cut(s) 494, 1202, 1308, 1392
HapII CCGG 7 cut(s) 123, 140, 180, 263, 828, 1203, 1326
HgaI GACGC 2 cut(s) 145, 1282
HhaI GCGC 2 cut(s) 486, 657
Hin1I GRCGYC 3 cut(s) 102, 137, 1293
Hin1II CATG 6 cut(s) 239, 737, 746, 752, 976, 1033
Hin6I GCGC 2 cut(s) 484, 655
HinP1I GCGC 2 cut(s) 484, 655
HindIII AAGCTT 1 cut(s) 1263
HinfI GANTC 7 cut(s) 344, 945, 1151, 1386, 1402, 1488, 1632
HpaII CCGG 7 cut(s) 123, 140, 180, 263, 828, 1203, 1326
HphI GGTGA 2 cut(s) 290, 762
Hpy166II GTNNAC 3 cut(s) 281, 1460, 1605
Hpy188I TCNGA 5 cut(s) 135, 436, 1075, 1101, 1344
Hpy188III TCNNGA 5 cut(s) 106, 326, 545, 1148, 1485
Hpy8I GTNNAC 3 cut(s) 281, 1460, 1605
Hpy99I CGWCG 2 cut(s) 107, 1234
HpyAV CCTTC 6 cut(s) 85, 211, 215, 777, 852, 1508
HpyCH4III ACNGT 5 cut(s) 408, 532, 722, 883, 1063
HpyCH4IV ACGT 2 cut(s) 102, 1229
HpyCH4V TGCA 8 cut(s) 289, 737, 961, 1004, 1022, 1127, 1140, 1481
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 194, 200, 639, 926, 1290
HpyF3I CTNAG 6 cut(s) 357, 867, 894, 1088, 1100, 1109
HpySE526I ACGT 2 cut(s) 102, 1229
Hsp92I GRCGYC 3 cut(s) 102, 137, 1293
Hsp92II CATG 6 cut(s) 239, 737, 746, 752, 976, 1033
HspAI GCGC 2 cut(s) 484, 655
Kzo9I GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 3 cut(s) 619, 895, 988
Lsp1109I GCAGC 7 cut(s) 10, 181, 301, 509, 626, 941, 967
LweI GCATC 4 cut(s) 343, 1009, 1114, 1490
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 2 cut(s) 926, 1440
MaeII ACGT 2 cut(s) 102, 1229
MaeIII GTNAC 1 cut(s) 532
MalI GATC 8 cut(s) 242, 710, 755, 1095, 1346, 1448, 1469, 1615
MbiI CCGCTC 1 cut(s) 660
MboI GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
MflI RGATCY 1 cut(s) 1093
MhlI GDGCHC 2 cut(s) 560, 1210
MluCI AATT 6 cut(s) 270, 317, 1005, 1141, 1500, 1621
MlyI GAGTC 2 cut(s) 338, 1395
MmeI TCCRAC 1 cut(s) 1098
Mph1103I ATGCAT 1 cut(s) 1024
MseI TTAA 4 cut(s) 1043, 1332, 1397, 1506
MslI CAYNNNNRTG 1 cut(s) 747
MspA1I CMGCKG 2 cut(s) 932, 1638
MspI CCGG 7 cut(s) 123, 140, 180, 263, 828, 1203, 1326
MspR9I CCNGG 3 cut(s) 294, 828, 999
Mva1269I GAATGC 2 cut(s) 486, 1022
MvaI CCWGG 2 cut(s) 294, 999
MvnI CGCG 2 cut(s) 107, 486
MwoI GCNNNNNNNGC 6 cut(s) 185, 194, 200, 639, 926, 1290
NciI CCSGG 1 cut(s) 828
NcoI CCATGG 1 cut(s) 742
NdeI CATATG 1 cut(s) 610
NdeII GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
NlaIII CATG 6 cut(s) 239, 737, 746, 752, 976, 1033
NlaIV GGNNCC 4 cut(s) 178, 559, 891, 900
NruI TCGCGA 1 cut(s) 107
NsiI ATGCAT 1 cut(s) 1024
NspI RCATGY 3 cut(s) 239, 752, 976
PaeI GCATGC 1 cut(s) 976
PaqCI CACCTGC 1 cut(s) 1138
PciI ACATGT 2 cut(s) 235, 748
PciSI GCTCTTC 1 cut(s) 507
PcsI WCGNNNNNNNCGW 1 cut(s) 1071
PctI GAATGC 2 cut(s) 486, 1022
PfeI GAWTC 5 cut(s) 945, 1151, 1402, 1488, 1632
PinAI ACCGGT 1 cut(s) 122
PleI GAGTC 2 cut(s) 338, 1394
PpsI GAGTC 2 cut(s) 338, 1394
PscI ACATGT 2 cut(s) 235, 748
Psp6I CCWGG 2 cut(s) 292, 997
PspGI CCWGG 2 cut(s) 292, 997
PspN4I GGNNCC 4 cut(s) 178, 559, 891, 900
PspPI GGNCC 2 cut(s) 492, 1307
PsrI GAACNNNNNNTAC 2 cut(s) 520, 552
PsuI RGATCY 1 cut(s) 1093
RruI TCGCGA 1 cut(s) 107
RsaI GTAC 6 cut(s) 157, 234, 578, 825, 1228, 1579
RsaNI GTAC 6 cut(s) 156, 233, 577, 824, 1227, 1578
RseI CAYNNNNRTG 1 cut(s) 747
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 4 cut(s) 1043, 1332, 1397, 1506
Sau3AI GATC 8 cut(s) 240, 708, 753, 1093, 1344, 1446, 1467, 1613
Sau96I GGNCC 2 cut(s) 492, 1307
ScaI AGTACT 1 cut(s) 157
SchI GAGTC 2 cut(s) 338, 1395
ScrFI CCNGG 3 cut(s) 294, 828, 999
SduI GDGCHC 2 cut(s) 560, 1210
SexAI ACCWGGT 1 cut(s) 997
SfaNI GCATC 4 cut(s) 343, 1009, 1114, 1490
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 3 cut(s) 253, 305, 326
SmoI CTYRAG 3 cut(s) 253, 305, 326
SphI GCATGC 1 cut(s) 976
Sse9I AATT 6 cut(s) 270, 317, 1005, 1141, 1500, 1621
SspI AATATT 1 cut(s) 679
SspMI CTAG 2 cut(s) 926, 1440
StyD4I CCNGG 3 cut(s) 292, 826, 997
StyI CCWWGG 3 cut(s) 417, 565, 742
TaaI ACNGT 5 cut(s) 408, 532, 722, 883, 1063
TaiI ACGT 2 cut(s) 105, 1232
TaqI TCGA 4 cut(s) 243, 1149, 1587, 1630
TasI AATT 6 cut(s) 270, 317, 1005, 1141, 1500, 1621
TatI WGTACW 2 cut(s) 155, 576
TauI GCSGC 3 cut(s) 497, 660, 1395
TfiI GAWTC 5 cut(s) 945, 1151, 1402, 1488, 1632
Tru1I TTAA 4 cut(s) 1043, 1332, 1397, 1506
Tru9I TTAA 4 cut(s) 1043, 1332, 1397, 1506
TscAI CASTG 1 cut(s) 1170
TseI GCWGC 7 cut(s) 23, 194, 289, 497, 639, 929, 980
TspDTI ATGAA 2 cut(s) 55, 460
TspGWI ACGGA 1 cut(s) 678
TspRI CASTG 1 cut(s) 1170
XceI RCATGY 3 cut(s) 239, 752, 976
XcmI CCANNNNNNNNNTGG 2 cut(s) 1195, 1425
XmiI GTMKAC 1 cut(s) 1604
XspI CTAG 2 cut(s) 926, 1440
ZraI GACGTC 1 cut(s) 103
ZrmI AGTACT 1 cut(s) 157
Zsp2I ATGCAT 1 cut(s) 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.