Rorug02G0156600

Squalene epoxidase 3-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
13945607 .. 13948677
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0156600.1

Sequence Viewer

Length: 1719 bp
ATGGTTATGGTAGGGGAGTTTCTAGGCGGGGCTGCTCTCGGAGCAGCATTCGGGCTGCTGTTTGATGTGGTTAAGGAAGCGATTGATAAGTCTACGACGTTTAATTCCCTCCTCAAGAACATCAAATCCACTCTAGACTTTTTAAAACCGGTGATCGAAAAGATAGCACAGCAGAACATGGAATTGGGTCTCCCGGAGGAGGAGATAAAGTATCTCATACAACAAATGAAGGAGGGCGTTGAGCTCGTTCGTAGGTCATCAAAGGTTAGTAAGTGGAACTGCATGAAGTATCACTACACGGACCAACTTGTGGAACTAGATGGGTCTTTGAGAAGACTGCTTGATGTATTGAAGGTGCAAGGAGTGAGGGATGTGAAGGAGACTCTGGTTTTGGCAAGGAAAAACCATGACCAACTTGTTGAATCGGCAAGGGATGGGAAGGAGACCTTGGATTTGGCGAGGAAAAATGGTGACCAACTTATTGAATCGGCAAGGGATGGGAAGGAGACCTTGGATTTGACGAGGAAAATAAACATGTTGGTCAAGCGAATTGAACGTTTGGTAATCCTTTGTCCTCACAAAGGGAAGTCAAGAAATCAGACCAAGAATAGAGTTTCAAGAGCAAACAAAAGGGGAGGAAGAAGTCGATTTTCGGAGGCAGCAAGTTCAAGGATAAATGAGTCGCATACTGAGGGCCAAGTTTTAGAGACATCCAACTCCAGATTTTTCAGTTTCAAAGAGTTGGAGACTGCTTGTAGGAATTTTCGGCCAGAAGGATTACTTGGTGAGGGAAGTTTTGGAAAGGTTTTCAAGGGTTGGGTGGATGAGAAGACGCTTGTTCCTTCAAATGTTGGCACCGGAATGATCACTGCTGTTAAGAAATGGAAGCCAGAAAGCTTCCAAGGCCTTGAAGAGTGGAAGGCAGAGGTGGACTTTCTAGGAACGCTTTCTCATCCCAACCTTGTTAAACTAATGGGAAACTGCTCAGCGGACAACGAGCTACTCCTTGTCTATGAATTCATGCAGAAAGGAAGCTTGGAGGTCCATCTTTTCAAAAGAACCCGAGACATTGAAGCAGTACTGTCTTGGGACAATAGACTCAAAATAGCTATCGGAGTAGCTCGAGCCTTGACTTTCTTACACAGTTTACCAAAACAAATCTTACACAGAGATGTCAAATCCTCTAATATATTGCTTGATGAGAATTACAATGCAAAACTCTCCGATTTTGGCTTGGCAATATTGGGGCCAACTGATGGAGAATCATATATAGAGACTAAAGTTATTGGCACATATGGTTATGCTGCTCCAGAATATGTTTCAACAGGTAATTTGTACGTGAAGAGCGATGTGTACAGCTTCGGTGTTGTGCTGCTCGAAATTCTGACAGGTCTAAGGGCCATTGATACAAACCGTTCTTTTCCAAAACAGAATTTAGTCGATTGGGCTAAACCACTTCTCTCTCATAAAATAAATTTGAAAACCTTCATGGATGCCAAGATAAATGGCCAATATTCCTCCAAGGAAGCATTACAGACAGCAAAGGTTACCCTAAAATGCCTAGCATCAGATCCTAAAGGTCGTCCTTCGATGAAAGAAGTTGTGGATGCATTGGAGCAGATTCAGGCAATCAAGGAAAACTCAAAACAAACAGAACTTACCCCAACTACAAAATCTACTCCAAGGGCACGTTTACTTACTTGGAATGGGAGAGAATGA

Protein Analysis

572

Amino Acids

64.27

Weight (kDa)

9.25

Isoelectric Point (pI)

31.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 138 3.2e-29 Arabidopsis broad-spectrum mildew resistance protein RPW8
Pkinase PF00069 258 - 536 2.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 260 - 538 4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 854
AccB7I CCANNNNNTGG 2 cut(s) 310, 1256
AccI GTMKAC 1 cut(s) 92
AciI CCGC 2 cut(s) 27, 989
AclI AACGTT 1 cut(s) 556
AclWI GGATC 1 cut(s) 1565
AcoI YGGCCR 2 cut(s) 767, 1507
AcsI RAATTY 5 cut(s) 760, 1016, 1380, 1432, 1474
AfaI GTAC 3 cut(s) 1080, 1337, 1355
AfiI CCNNNNNNNGG 4 cut(s) 199, 310, 581, 1256
AflIII ACRYGT 1 cut(s) 534
AgeI ACCGGT 1 cut(s) 148
AloI GAACNNNNNNTCC 2 cut(s) 110, 142
AluBI AGCT 7 cut(s) 244, 897, 1000, 1035, 1109, 1121, 1359
AluI AGCT 7 cut(s) 244, 897, 1000, 1035, 1109, 1121, 1359
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 8 cut(s) 194, 374, 437, 500, 701, 740, 1059, 1268
AlwI GGATC 1 cut(s) 1565
Ama87I CYCGRG 2 cut(s) 1062, 1122
AoxI GGCC 6 cut(s) 694, 767, 904, 1247, 1398, 1507
ApeKI GCWGC 6 cut(s) 32, 44, 55, 659, 1304, 1372
ApoI RAATTY 5 cut(s) 760, 1016, 1380, 1432, 1474
ArsI GACNNNNNNTTYG 6 cut(s) 373, 405, 436, 468, 499, 531
AsiGI ACCGGT 1 cut(s) 148
Asp700I GAANNNNTTC 2 cut(s) 946, 1484
AspS9I GGNCC 5 cut(s) 301, 694, 1042, 1247, 1398
AsuC2I CCSGG 1 cut(s) 194
AsuHPI GGTGA 3 cut(s) 163, 482, 797
AvaI CYCGRG 2 cut(s) 1062, 1122
AvaII GGWCC 2 cut(s) 301, 1042
BaeGI GKGCMC 1 cut(s) 1690
BalI TGGCCA 1 cut(s) 1509
BanI GGYRCC 1 cut(s) 854
BanII GRGCYC 1 cut(s) 246
BarI GAAGNNNNNNTAC 2 cut(s) 278, 310
BbsI GAAGAC 2 cut(s) 340, 836
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 6 cut(s) 19, 42, 56, 671, 1291, 1359
BccI CCATC 5 cut(s) 314, 428, 491, 1053, 1250
BclI TGATCA 1 cut(s) 864
BcnI CCSGG 1 cut(s) 194
BcoDI GTCTC 8 cut(s) 194, 374, 437, 500, 701, 740, 1059, 1268
BfaI CTAG 5 cut(s) 23, 134, 317, 938, 1562
BisI GCNGC 6 cut(s) 33, 45, 56, 660, 1305, 1373
BlpI GCTNAGC 1 cut(s) 985
BlsI GCNGC 6 cut(s) 34, 46, 57, 661, 1306, 1374
BmcAI AGTACT 1 cut(s) 1080
Bme1390I CCNGG 1 cut(s) 194
Bme18I GGWCC 2 cut(s) 301, 1042
BmeT110I CYCGRG 2 cut(s) 1062, 1122
BmgT120I GGNCC 5 cut(s) 301, 694, 1042, 1247, 1398
BmiI GGNNCC 2 cut(s) 856, 1248
BmrFI CCNGG 1 cut(s) 194
BmsI GCATC 3 cut(s) 1483, 1574, 1597
BpiI GAAGAC 2 cut(s) 340, 836
BpmI CTGGAG 2 cut(s) 703, 1293
Bpu1102I GCTNAGC 1 cut(s) 985
BpuEI CTTGAG 1 cut(s) 98
BpuMI CCSGG 1 cut(s) 194
BsaAI YACGTR 1 cut(s) 1339
BsaI GGTCTC 3 cut(s) 194, 437, 500
BsaJI CCNNGG 5 cut(s) 447, 510, 901, 1521, 1682
BsaWI WCCGGW 2 cut(s) 148, 857
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 4 cut(s) 199, 310, 581, 1256
Bse118I RCCGGY 1 cut(s) 148
BseDI CCNNGG 5 cut(s) 447, 510, 901, 1521, 1682
BseGI GGATG 8 cut(s) 376, 439, 502, 710, 829, 952, 1498, 1612
BseLI CCNNNNNNNGG 4 cut(s) 199, 310, 581, 1256
BseMII CTCAG 2 cut(s) 681, 999
BseRI GAGGAG 3 cut(s) 101, 212, 215
BseSI GKGCMC 1 cut(s) 1690
BseXI GCAGC 6 cut(s) 19, 42, 56, 671, 1291, 1359
BshFI GGCC 6 cut(s) 696, 769, 906, 1249, 1400, 1509
BshNI GGYRCC 1 cut(s) 854
BshTI ACCGGT 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 246
BsiHKCI CYCGRG 2 cut(s) 1062, 1122
BsiSI CCGG 3 cut(s) 149, 194, 858
BslFI GGGAC 1 cut(s) 1103
BslI CCNNNNNNNGG 4 cut(s) 199, 310, 581, 1256
BsmAI GTCTC 8 cut(s) 194, 374, 437, 500, 701, 740, 1059, 1268
BsmFI GGGAC 1 cut(s) 1103
BsmI GAATGC 1 cut(s) 47
BsnI GGCC 6 cut(s) 696, 769, 906, 1249, 1400, 1509
Bso31I GGTCTC 3 cut(s) 194, 437, 500
BsoBI CYCGRG 2 cut(s) 1062, 1122
Bsp1286I GDGCHC 2 cut(s) 246, 1690
Bsp1407I TGTACA 1 cut(s) 1353
Bsp143I GATC 3 cut(s) 153, 864, 1570
Bsp1720I GCTNAGC 1 cut(s) 985
BspACI CCGC 2 cut(s) 27, 989
BspANI GGCC 6 cut(s) 696, 769, 906, 1249, 1400, 1509
BspCNI CTCAG 2 cut(s) 682, 998
BspLI GGNNCC 2 cut(s) 856, 1248
BspPI GGATC 1 cut(s) 1565
BspQI GCTCTTC 1 cut(s) 1337
BspT107I GGYRCC 1 cut(s) 854
BspTNI GGTCTC 3 cut(s) 194, 437, 500
BsrFI RCCGGY 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 1353
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 5 cut(s) 447, 510, 901, 1521, 1682
BssMI GATC 3 cut(s) 153, 864, 1570
BssT1I CCWWGG 5 cut(s) 447, 510, 901, 1521, 1682
Bst4CI ACNGT 3 cut(s) 1083, 1145, 1415
Bst6I CTCTTC 2 cut(s) 906, 1337
BstAUI TGTACA 1 cut(s) 1353
BstBAI YACGTR 1 cut(s) 1339
BstDEI CTNAG 3 cut(s) 690, 985, 1394
BstEII GGTNACC 2 cut(s) 470, 1546
BstENI CCTNNNNNAGG 1 cut(s) 579
BstF5I GGATG 8 cut(s) 376, 439, 502, 710, 829, 952, 1498, 1612
BstKTI GATC 3 cut(s) 156, 867, 1573
BstMAI GTCTC 8 cut(s) 194, 374, 437, 500, 701, 740, 1059, 1268
BstMBI GATC 3 cut(s) 153, 864, 1570
BstMWI GCNNNNNNNGC 2 cut(s) 41, 903
BstNSI RCATGY 1 cut(s) 538
BstPI GGTNACC 2 cut(s) 470, 1546
BstSCI CCNGG 1 cut(s) 192
BstSLI GKGCMC 1 cut(s) 1690
BstV1I GCAGC 6 cut(s) 19, 42, 56, 671, 1291, 1359
BstV2I GAAGAC 2 cut(s) 340, 836
BstX2I RGATCY 1 cut(s) 1570
BstYI RGATCY 1 cut(s) 1570
BsuRI GGCC 6 cut(s) 696, 769, 906, 1249, 1400, 1509
BtgZI GCGATG 1 cut(s) 1362
BtsCI GGATG 8 cut(s) 376, 439, 502, 710, 829, 952, 1498, 1612
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 1 cut(s) 867
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 5 cut(s) 301, 694, 1042, 1247, 1398
CseI GACGC 1 cut(s) 841
Csp6I GTAC 3 cut(s) 1079, 1336, 1354
CspAI ACCGGT 1 cut(s) 148
CviAII CATG 6 cut(s) 178, 283, 407, 535, 1021, 1489
CviQI GTAC 3 cut(s) 1079, 1336, 1354
DdeI CTNAG 3 cut(s) 690, 985, 1394
DpnI GATC 3 cut(s) 155, 866, 1572
DpnII GATC 3 cut(s) 153, 864, 1570
DraI TTTAAA 1 cut(s) 144
EaeI YGGCCR 2 cut(s) 767, 1507
Eam1104I CTCTTC 2 cut(s) 906, 1337
EarI CTCTTC 2 cut(s) 906, 1337
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 5 cut(s) 447, 510, 901, 1521, 1682
Eco147I AGGCCT 1 cut(s) 906
Eco24I GRGCYC 1 cut(s) 246
Eco31I GGTCTC 3 cut(s) 194, 437, 500
Eco47I GGWCC 2 cut(s) 301, 1042
Eco53kI GAGCTC 1 cut(s) 244
Eco88I CYCGRG 2 cut(s) 1062, 1122
Eco91I GGTNACC 2 cut(s) 470, 1546
EcoICRI GAGCTC 1 cut(s) 244
EcoNI CCTNNNNNAGG 1 cut(s) 579
EcoO65I GGTNACC 2 cut(s) 470, 1546
EcoRI GAATTC 1 cut(s) 1016
EcoT14I CCWWGG 5 cut(s) 447, 510, 901, 1521, 1682
EcoT22I ATGCAT 1 cut(s) 1612
EcoT38I GRGCYC 1 cut(s) 246
ErhI CCWWGG 5 cut(s) 447, 510, 901, 1521, 1682
FaeI CATG 6 cut(s) 181, 286, 410, 538, 1024, 1492
FalI AAGNNNNNCTT 6 cut(s) 431, 463, 494, 526, 765, 797
FaqI GGGAC 1 cut(s) 1103
FatI CATG 6 cut(s) 177, 282, 406, 534, 1020, 1488
FauI CCCGC 1 cut(s) 20
FauNDI CATATG 1 cut(s) 1294
FbaI TGATCA 1 cut(s) 864
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 6 cut(s) 33, 45, 56, 660, 1305, 1373
FokI GGATG 8 cut(s) 383, 446, 509, 697, 836, 939, 1505, 1619
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 6 cut(s) 33, 45, 56, 660, 1305, 1373
FspBI CTAG 5 cut(s) 23, 134, 317, 938, 1562
GluI GCNGC 6 cut(s) 33, 45, 56, 660, 1305, 1373
GsuI CTGGAG 2 cut(s) 703, 1293
HaeIII GGCC 6 cut(s) 696, 769, 906, 1249, 1400, 1509
HapII CCGG 3 cut(s) 149, 194, 858
HgaI GACGC 1 cut(s) 841
Hin1II CATG 6 cut(s) 181, 286, 410, 538, 1024, 1492
HindIII AAGCTT 2 cut(s) 895, 1033
HinfI GANTC 7 cut(s) 382, 422, 485, 680, 1098, 1262, 1621
HpaII CCGG 3 cut(s) 149, 194, 858
HphI GGTGA 3 cut(s) 163, 482, 797
Hpy166II GTNNAC 5 cut(s) 93, 931, 1148, 1354, 1694
Hpy188I TCNGA 7 cut(s) 41, 600, 655, 1115, 1225, 1386, 1570
Hpy188III TCNNGA 6 cut(s) 115, 134, 591, 618, 720, 1310
Hpy8I GTNNAC 5 cut(s) 93, 931, 1148, 1354, 1694
Hpy99I CGWCG 1 cut(s) 100
HpyCH4III ACNGT 3 cut(s) 1083, 1145, 1415
HpyCH4IV ACGT 4 cut(s) 98, 556, 1338, 1690
HpyCH4V TGCA 5 cut(s) 282, 358, 1024, 1214, 1610
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 903
HpyF3I CTNAG 3 cut(s) 690, 985, 1394
HpySE526I ACGT 4 cut(s) 98, 556, 1338, 1690
Hsp92II CATG 6 cut(s) 181, 286, 410, 538, 1024, 1492
Ksp22I TGATCA 1 cut(s) 864
Kzo9I GATC 3 cut(s) 153, 864, 1570
LguI GCTCTTC 1 cut(s) 1337
LmnI GCTCC 3 cut(s) 41, 1312, 1615
Lsp1109I GCAGC 6 cut(s) 19, 42, 56, 671, 1291, 1359
LweI GCATC 3 cut(s) 1483, 1574, 1597
MaeI CTAG 5 cut(s) 23, 134, 317, 938, 1562
MaeII ACGT 4 cut(s) 98, 556, 1338, 1690
MaeIII GTNAC 2 cut(s) 470, 1546
MalI GATC 3 cut(s) 155, 866, 1572
MboI GATC 3 cut(s) 153, 864, 1570
MboII GAAGA 5 cut(s) 345, 651, 841, 923, 1354
MflI RGATCY 1 cut(s) 1570
MhlI GDGCHC 2 cut(s) 246, 1690
MlsI TGGCCA 1 cut(s) 1509
MluNI TGGCCA 1 cut(s) 1509
MlyI GAGTC 3 cut(s) 376, 689, 1092
MmeI TCCRAC 2 cut(s) 723, 738
Mox20I TGGCCA 1 cut(s) 1509
Mph1103I ATGCAT 1 cut(s) 1612
MroXI GAANNNNTTC 2 cut(s) 946, 1484
MscI TGGCCA 1 cut(s) 1509
MseI TTAA 5 cut(s) 72, 102, 143, 876, 966
MslI CAYNNNNRTG 2 cut(s) 860, 1170
Msp20I TGGCCA 1 cut(s) 1509
MspA1I CMGCKG 1 cut(s) 989
MspI CCGG 3 cut(s) 149, 194, 858
MspR9I CCNGG 1 cut(s) 194
Mva1269I GAATGC 1 cut(s) 47
MwoI GCNNNNNNNGC 2 cut(s) 41, 903
NciI CCSGG 1 cut(s) 194
NdeI CATATG 1 cut(s) 1294
NdeII GATC 3 cut(s) 153, 864, 1570
NlaIII CATG 6 cut(s) 181, 286, 410, 538, 1024, 1492
NlaIV GGNNCC 2 cut(s) 856, 1248
NmuCI GTSAC 1 cut(s) 470
NsiI ATGCAT 1 cut(s) 1612
NspI RCATGY 1 cut(s) 538
PaeR7I CTCGAG 1 cut(s) 1122
PceI AGGCCT 1 cut(s) 906
PciI ACATGT 1 cut(s) 534
PciSI GCTCTTC 1 cut(s) 1337
PcsI WCGNNNNNNNCGW 1 cut(s) 1344
PctI GAATGC 1 cut(s) 47
PdmI GAANNNNTTC 2 cut(s) 946, 1484
PfeI GAWTC 4 cut(s) 422, 485, 1262, 1621
PflMI CCANNNNNTGG 2 cut(s) 310, 1256
PfoI TCCNGGA 1 cut(s) 192
PinAI ACCGGT 1 cut(s) 148
PkrI GCNGC 6 cut(s) 34, 46, 57, 661, 1306, 1374
PleI GAGTC 3 cut(s) 376, 688, 1092
PpsI GAGTC 3 cut(s) 376, 688, 1092
Ppu21I YACGTR 1 cut(s) 1339
PscI ACATGT 1 cut(s) 534
Psp124BI GAGCTC 1 cut(s) 246
Psp1406I AACGTT 1 cut(s) 556
PspEI GGTNACC 2 cut(s) 470, 1546
PspN4I GGNNCC 2 cut(s) 856, 1248
PspPI GGNCC 5 cut(s) 301, 694, 1042, 1247, 1398
PspXI VCTCGAGB 1 cut(s) 1122
PsuI RGATCY 1 cut(s) 1570
RsaI GTAC 3 cut(s) 1080, 1337, 1355
RsaNI GTAC 3 cut(s) 1079, 1336, 1354
RseI CAYNNNNRTG 2 cut(s) 860, 1170
SacI GAGCTC 1 cut(s) 246
SapI GCTCTTC 1 cut(s) 1337
SaqAI TTAA 5 cut(s) 72, 102, 143, 876, 966
SatI GCNGC 6 cut(s) 33, 45, 56, 660, 1305, 1373
Sau3AI GATC 3 cut(s) 153, 864, 1570
Sau96I GGNCC 5 cut(s) 301, 694, 1042, 1247, 1398
ScaI AGTACT 1 cut(s) 1080
SchI GAGTC 3 cut(s) 376, 689, 1092
ScrFI CCNGG 1 cut(s) 194
SduI GDGCHC 2 cut(s) 246, 1690
SfaNI GCATC 3 cut(s) 1483, 1574, 1597
Sfr274I CTCGAG 1 cut(s) 1122
SinI GGWCC 2 cut(s) 301, 1042
SlaI CTCGAG 1 cut(s) 1122
SmiMI CAYNNNNRTG 2 cut(s) 860, 1170
SmlI CTYRAG 2 cut(s) 113, 1122
SmoI CTYRAG 2 cut(s) 113, 1122
SseBI AGGCCT 1 cut(s) 906
SsiI CCGC 2 cut(s) 27, 989
SspI AATATT 2 cut(s) 1242, 1514
SspMI CTAG 5 cut(s) 23, 134, 317, 938, 1562
SstI GAGCTC 1 cut(s) 246
StuI AGGCCT 1 cut(s) 906
StyD4I CCNGG 1 cut(s) 192
StyI CCWWGG 5 cut(s) 447, 510, 901, 1521, 1682
TaaI ACNGT 3 cut(s) 1083, 1145, 1415
TaiI ACGT 4 cut(s) 101, 559, 1341, 1693
TaqI TCGA 6 cut(s) 156, 646, 1123, 1377, 1440, 1589
TatI WGTACW 2 cut(s) 1078, 1353
TfiI GAWTC 4 cut(s) 422, 485, 1262, 1621
Tru1I TTAA 5 cut(s) 72, 102, 143, 876, 966
Tru9I TTAA 5 cut(s) 72, 102, 143, 876, 966
TscAI CASTG 1 cut(s) 874
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 6 cut(s) 32, 44, 55, 659, 1304, 1372
Tsp45I GTSAC 1 cut(s) 470
TspDTI ATGAA 6 cut(s) 242, 299, 1009, 1029, 1477, 1607
TspGWI ACGGA 1 cut(s) 314
TspRI CASTG 1 cut(s) 874
Van91I CCANNNNNTGG 2 cut(s) 310, 1256
VpaK11BI GGWCC 2 cut(s) 301, 1042
XagI CCTNNNNNAGG 1 cut(s) 579
XapI RAATTY 5 cut(s) 760, 1016, 1380, 1432, 1474
XbaI TCTAGA 1 cut(s) 133
XceI RCATGY 1 cut(s) 538
XhoI CTCGAG 1 cut(s) 1122
XmiI GTMKAC 1 cut(s) 92
XmnI GAANNNNTTC 2 cut(s) 946, 1484
XspI CTAG 5 cut(s) 23, 134, 317, 938, 1562
ZrmI AGTACT 1 cut(s) 1080
Zsp2I ATGCAT 1 cut(s) 1612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.