squalene
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SE | PF08491 | 1 - 81 | 1.8e-24 | Squalene epoxidase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 332 |
| AarI | CACCTGC | 2 cut(s) | 82, 137 |
| Acc36I | ACCTGC | 2 cut(s) | 82, 137 |
| AgsI | TTSAA | 1 cut(s) | 95 |
| AjnI | CCWGG | 1 cut(s) | 159 |
| Alw26I | GTCTC | 1 cut(s) | 396 |
| AspLEI | GCGC | 1 cut(s) | 246 |
| AsuHPI | GGTGA | 3 cut(s) | 168, 258, 350 |
| BanII | GRGCYC | 1 cut(s) | 52 |
| BciT130I | CCWGG | 1 cut(s) | 161 |
| BcoDI | GTCTC | 1 cut(s) | 396 |
| BfaI | CTAG | 2 cut(s) | 270, 291 |
| BfoI | RGCGCY | 1 cut(s) | 247 |
| BfuAI | ACCTGC | 2 cut(s) | 82, 137 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 234 |
| Bme1390I | CCNGG | 1 cut(s) | 161 |
| BmrFI | CCNGG | 1 cut(s) | 161 |
| BmsI | GCATC | 5 cut(s) | 58, 182, 246, 317, 324 |
| BpmI | CTGGAG | 1 cut(s) | 17 |
| BpuEI | CTTGAG | 1 cut(s) | 244 |
| BsaAI | YACGTR | 1 cut(s) | 56 |
| BsaI | GGTCTC | 1 cut(s) | 396 |
| BsaJI | CCNNGG | 1 cut(s) | 229 |
| Bse3DI | GCAATG | 1 cut(s) | 107 |
| BseBI | CCWGG | 1 cut(s) | 161 |
| BseDI | CCNNGG | 1 cut(s) | 229 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseMI | GCAATG | 1 cut(s) | 107 |
| BseMII | CTCAG | 1 cut(s) | 58 |
| BseRI | GAGGAG | 1 cut(s) | 384 |
| BsmAI | GTCTC | 1 cut(s) | 396 |
| Bso31I | GGTCTC | 1 cut(s) | 396 |
| Bsp1286I | GDGCHC | 1 cut(s) | 52 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspCNI | CTCAG | 1 cut(s) | 57 |
| BspMI | ACCTGC | 2 cut(s) | 82, 137 |
| BspTNI | GGTCTC | 1 cut(s) | 396 |
| BsrDI | GCAATG | 1 cut(s) | 107 |
| BssECI | CCNNGG | 1 cut(s) | 229 |
| BssMI | GATC | 1 cut(s) | 58 |
| BssT1I | CCWWGG | 1 cut(s) | 229 |
| Bst2UI | CCWGG | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 402 |
| BstBAI | YACGTR | 1 cut(s) | 56 |
| BstC8I | GCNNGC | 2 cut(s) | 211, 378 |
| BstDEI | CTNAG | 1 cut(s) | 44 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstH2I | RGCGCY | 1 cut(s) | 247 |
| BstHHI | GCGC | 1 cut(s) | 246 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 396 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 234, 243 |
| BstNI | CCWGG | 1 cut(s) | 161 |
| BstNSI | RCATGY | 2 cut(s) | 213, 280 |
| BstSCI | CCNGG | 1 cut(s) | 159 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| BveI | ACCTGC | 2 cut(s) | 82, 137 |
| Cac8I | GCNNGC | 2 cut(s) | 211, 378 |
| CfoI | GCGC | 1 cut(s) | 246 |
| CsiI | ACCWGGT | 1 cut(s) | 159 |
| CviAII | CATG | 2 cut(s) | 210, 277 |
| CviJI | RGCY | 6 cut(s) | 11, 50, 118, 228, 283, 290 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 50, 118, 228, 283, 290 |
| DdeI | CTNAG | 1 cut(s) | 44 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| Eam1104I | CTCTTC | 1 cut(s) | 402 |
| EarI | CTCTTC | 1 cut(s) | 402 |
| Eco130I | CCWWGG | 1 cut(s) | 229 |
| Eco24I | GRGCYC | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 396 |
| EcoRII | CCWGG | 1 cut(s) | 159 |
| EcoT14I | CCWWGG | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 52 |
| ErhI | CCWWGG | 1 cut(s) | 229 |
| FaeI | CATG | 2 cut(s) | 213, 280 |
| FaiI | YATR | 7 cut(s) | 134, 157, 211, 278, 332, 374, 382 |
| FatI | CATG | 2 cut(s) | 209, 276 |
| FokI | GGATG | 1 cut(s) | 302 |
| FriOI | GRGCYC | 1 cut(s) | 52 |
| FspBI | CTAG | 2 cut(s) | 270, 291 |
| GlaI | GCGC | 1 cut(s) | 245 |
| GsuI | CTGGAG | 1 cut(s) | 17 |
| HaeII | RGCGCY | 1 cut(s) | 247 |
| HhaI | GCGC | 1 cut(s) | 246 |
| Hin1II | CATG | 2 cut(s) | 213, 280 |
| Hin6I | GCGC | 1 cut(s) | 244 |
| HinP1I | GCGC | 1 cut(s) | 244 |
| HinfI | GANTC | 2 cut(s) | 37, 95 |
| HphI | GGTGA | 3 cut(s) | 168, 258, 350 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 34 |
| HpyAV | CCTTC | 2 cut(s) | 273, 335 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyCH4IV | ACGT | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 4 cut(s) | 71, 112, 173, 308 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 234, 243 |
| HpyF3I | CTNAG | 1 cut(s) | 44 |
| HpySE526I | ACGT | 1 cut(s) | 55 |
| Hsp92II | CATG | 2 cut(s) | 213, 280 |
| HspAI | GCGC | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LweI | GCATC | 5 cut(s) | 58, 182, 246, 317, 324 |
| MabI | ACCWGGT | 1 cut(s) | 159 |
| MaeI | CTAG | 2 cut(s) | 270, 291 |
| MaeII | ACGT | 1 cut(s) | 55 |
| MaeIII | GTNAC | 1 cut(s) | 218 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 3 cut(s) | 20, 32, 389 |
| MhlI | GDGCHC | 1 cut(s) | 52 |
| MnlI | CCTC | 2 cut(s) | 227, 405 |
| MspR9I | CCNGG | 1 cut(s) | 161 |
| MvaI | CCWGG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 234, 243 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 2 cut(s) | 213, 280 |
| NspI | RCATGY | 2 cut(s) | 213, 280 |
| PaeI | GCATGC | 1 cut(s) | 213 |
| PaqCI | CACCTGC | 2 cut(s) | 82, 137 |
| PfeI | GAWTC | 2 cut(s) | 37, 95 |
| Ppu21I | YACGTR | 1 cut(s) | 56 |
| PsiI | TTATAA | 1 cut(s) | 332 |
| Psp6I | CCWGG | 1 cut(s) | 159 |
| PspGI | CCWGG | 1 cut(s) | 159 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| ScrFI | CCNGG | 1 cut(s) | 161 |
| SduI | GDGCHC | 1 cut(s) | 52 |
| SetI | ASST | 8 cut(s) | 58, 76, 93, 151, 165, 181, 271, 392 |
| SexAI | ACCWGGT | 1 cut(s) | 159 |
| SfaNI | GCATC | 5 cut(s) | 58, 182, 246, 317, 324 |
| SmlI | CTYRAG | 1 cut(s) | 223 |
| SmoI | CTYRAG | 1 cut(s) | 223 |
| SphI | GCATGC | 1 cut(s) | 213 |
| SspMI | CTAG | 2 cut(s) | 270, 291 |
| StyD4I | CCNGG | 1 cut(s) | 159 |
| StyI | CCWWGG | 1 cut(s) | 229 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TaiI | ACGT | 1 cut(s) | 58 |
| TfiI | GAWTC | 2 cut(s) | 37, 95 |
| TspDTI | ATGAA | 1 cut(s) | 389 |
| TspGWI | ACGGA | 1 cut(s) | 191 |
| XceI | RCATGY | 2 cut(s) | 213, 280 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 139 |
| XspI | CTAG | 2 cut(s) | 270, 291 |