Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0000108

Physical Location & Seq

Genomic Coordinates Forward (+)

28973319 .. 28980787

Gene Structure 7469 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1301500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGTGGATGTTGATCCGTACGTTCTCTTGACCTTCTTCGCCTCCCTCTTAGGTTTCCTCGTTCTGTCTGTTCTCCGACGCCGTAATTACAGCAAAGCCAAGAGCAAGGCTCAGAAGAACAACAATAATACGACGAACGTTCAAGAAAAAAGTATCAACCGCTTCGATGACGGAGAAGTCCCGCCAGTTCACGGCACTGGCACCGACGTCATCGTTGTCGGTGCAGGAGTTGCTGGCGGTGCTCTCGCCCTTACCCTCGCTAAGGAGGGAAGACGTGTTCATGTGATTGAAAGAGACTTGACGGAGCCGGATCGAATTGTCGGTGAGCTTCTCCAGCCGGGGGGGTACCTGAAATTGATTGAGTTGGGACTTGAAGATTGTGTGGAGGAAATTGATGCTCAGCGAGTGGTTGGATACGCTCTTTTTAAGGATGGGAAGAACACTCGGCTGACCTATCCTCTGGAACAGTTCAACTCCGATGTGGCGGGGAGAAGTTTCCACAATGGCCGATTCATACAGAGGATGAGAGAAAAAGTTGCCCAGCTTCCCAATGTACAACTGGAGCAAGGTACTGTGACATCCCTGCTTGAAGAAAATGGAACAATTAAGGGGGTTCAATACAAACCTAAGGATGGTCAAGAACTTAAAGTTTACGCTCCTCTTACAATTGTTTGTGATGGTTGCTTCTCAAATCTGCGCTGCACTCTTTGCAAGCCTCAGGTAGAAGTACTCTCTTGCTTCGTAGGACTAGTCTTGGAAAATTGCAGACTCCCATTTGCAAATCATGGGCATGTTATTCTAGGAGATCCCTCTCCGATCCTGTTTTATCAAATCAGCAGTACAGAAGTCCGTTGCTTGGTTGATGTACCCGGCCAAAGGGTACCTCCGATTGCCAATGGTGCGTTGGCCAACCGTTTGAAGAATGTGGTGGCTCCACAGGTTCCACCTGAACTTCATGATGCCTTCATTGCTGCAATTGATAAAGGAAATATTAGAACAATGCCAAACAGAAGCATGCCTGCCAGTCCACATCCAACTCCAGGAGCCCTTTTGCTGGGCGATGCTTTCAATATGCGTCATCCTTTAACTGGCGGAGGAATGACTGTGGCACTGTCAGATATTGTCGTGCTGAGGGATCTTCTTAAGCCGTTGCATGACCTACATGATGCAGCTTCATTGTGCACATACCTAGAATCGTTTTATACCTTGCGGAAGCCGGTTGCATCTACAATAAATACCTTGGCAGGTGCCCTATACAAGGTGTTCTCTGCCTCCCCTGATGAAGCAAGGACAGAGATGCGCCAAGCATGTTTTGACTATCTCAGCCTCGGAGGTTTCTGTTCAACAGGACCAGTGGCTTTGCTTTCTGGTCTAAACCCTTGTCCGTTGAGTTTAGTCCTTCACTTTTTTGCTGTGGCGGTATATGGTGTTGGTCGTTTGCTACTACCATTTCCTTCACTAAAACGCGTGTGGCTTGGAGCTAGAATACTTTTGAGTGCGTCGGGTATTATATTCCCCATCATCAAGGCGGAAGGAGTAAGACAGACCTTCTTTCCTGCTACTATTCCAGCTTATCATAGAGCTCCTCCTGCTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0004506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009611 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0012505 GO:0016125 GO:0016126 GO:0016491 GO:0016705 GO:0016709 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

533

Amino Acids

57.91

Weight (kDa)

8.37

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	68 - 383	5.7e-16	FAD binding domain
DAO	PF01266	69 - 99	7.3e-06	FAD dependent oxidoreductase
GIDA	PF01134	69 - 233	5.2e-08	Glucose inhibited division protein A
SE	PF08491	219 - 488	1.2e-117	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000108)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22830 AT4G37760
fragaria_vesca	FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica	MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica	Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis	pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis	RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata	RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora	Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii	Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa	Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha	Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana	Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1235
AasI	GACNNNNNNGTC	1 cut(s)	176
AatII	GACGTC	1 cut(s)	210
Acc36I	ACCTGC	1 cut(s)	1235
Acc65I	GGTACC	2 cut(s)	345, 880
AccB1I	GGYRCC	4 cut(s)	200, 345, 880, 1247
AccII	CGCG	1 cut(s)	1467
AciI	CCGC	8 cut(s)	160, 182, 237, 485, 1092, 1210, 1418, 1529
AclI	AACGTT	1 cut(s)	138
AclWI	GGATC	5 cut(s)	8, 318, 800, 811, 1143
AcoI	YGGCCR	3 cut(s)	505, 871, 906
AcyI	GRCGYC	2 cut(s)	79, 207
AfaI	GTAC	8 cut(s)	20, 347, 555, 571, 729, 841, 867, 882
AflII	CTTAAG	1 cut(s)	1142
AflIII	ACRYGT	2 cut(s)	274, 1465
AgsI	TTSAA	9 cut(s)	143, 290, 374, 472, 590, 617, 919, 1069, 1344
AhlI	ACTAGT	1 cut(s)	748
AjiI	CACGTC	1 cut(s)	275
AjnI	CCWGG	1 cut(s)	1039
AloI	GAACNNNNNNTCC	2 cut(s)	261, 293
AluBI	AGCT	6 cut(s)	328, 544, 1172, 1481, 1571, 1583
AluI	AGCT	6 cut(s)	328, 544, 1172, 1481, 1571, 1583
Alw21I	GWGCWC	3 cut(s)	244, 1184, 1585
Alw26I	GTCTC	1 cut(s)	288
Alw44I	GTGCAC	1 cut(s)	1180
AlwI	GGATC	5 cut(s)	8, 318, 800, 811, 1143
AoxI	GGCC	3 cut(s)	505, 871, 906
ApaLI	GTGCAC	1 cut(s)	1180
ApeKI	GCWGC	3 cut(s)	699, 971, 1169
Asp718I	GGTACC	2 cut(s)	345, 880
AspLEI	GCGC	2 cut(s)	699, 1302
AspS9I	GGNCC	1 cut(s)	1349
AsuC2I	CCSGG	2 cut(s)	339, 870
AsuHPI	GGTGA	1 cut(s)	335
AvaII	GGWCC	1 cut(s)	1349
AxyI	CCTNAGG	2 cut(s)	627, 717
BaeGI	GKGCMC	2 cut(s)	1184, 1252
BalI	TGGCCA	1 cut(s)	908
BanI	GGYRCC	4 cut(s)	200, 345, 880, 1247
BanII	GRGCYC	2 cut(s)	1048, 1585
BbsI	GAAGAC	1 cut(s)	277
Bbv12I	GWGCWC	3 cut(s)	244, 1184, 1585
BbvCI	CCTCAGC	1 cut(s)	1130
BbvI	GCAGC	3 cut(s)	686, 958, 1181
BccI	CCATC	4 cut(s)	425, 626, 671, 1526
BceAI	ACGGC	3 cut(s)	66, 208, 1132
BciT130I	CCWGG	1 cut(s)	1041
BciVI	GTATCC	1 cut(s)	407
BcnI	CCSGG	2 cut(s)	339, 870
BcoDI	GTCTC	1 cut(s)	288
BcuI	ACTAGT	1 cut(s)	748
BfaI	CTAG	4 cut(s)	749, 800, 1190, 1482
BfrI	CTTAAG	1 cut(s)	1142
BfuAI	ACCTGC	1 cut(s)	1235
BfuI	GTATCC	1 cut(s)	407
BisI	GCNGC	3 cut(s)	700, 972, 1170
BlpI	GCTNAGC	1 cut(s)	399
BlsI	GCNGC	3 cut(s)	701, 973, 1171
BmcAI	AGTACT	1 cut(s)	729
Bme1390I	CCNGG	3 cut(s)	339, 870, 1041
Bme18I	GGWCC	1 cut(s)	1349
BmgBI	CACGTC	1 cut(s)	275
BmgT120I	GGNCC	1 cut(s)	1349
BmiI	GGNNCC	8 cut(s)	202, 306, 347, 882, 933, 942, 1045, 1249
BmrFI	CCNGG	3 cut(s)	339, 870, 1041
BmsI	GCATC	6 cut(s)	385, 949, 1051, 1156, 1232, 1287
BpiI	GAAGAC	1 cut(s)	277
BplI	GAGNNNNNCTC	2 cut(s)	94, 126
BpmI	CTGGAG	3 cut(s)	317, 581, 1023
Bpu10I	CCTNAGC	2 cut(s)	261, 1130
Bpu1102I	GCTNAGC	1 cut(s)	399
BpuMI	CCSGG	2 cut(s)	339, 870
BsaBI	GATNNNNATC	1 cut(s)	12
BsaHI	GRCGYC	2 cut(s)	79, 207
BsaJI	CCNNGG	3 cut(s)	338, 1239, 1327
Bse118I	RCCGGY	1 cut(s)	1216
Bse1I	ACTGG	6 cut(s)	185, 202, 564, 1023, 1093, 1352
Bse21I	CCTNAGG	2 cut(s)	627, 717
Bse3DI	GCAATG	1 cut(s)	966
Bse8I	GATNNNNATC	1 cut(s)	12
BseBI	CCWGG	1 cut(s)	1041
BseDI	CCNNGG	3 cut(s)	338, 1239, 1327
BseGI	GGATG	7 cut(s)	13, 436, 528, 578, 637, 1030, 1078
BseJI	GATNNNNATC	1 cut(s)	12
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	6 cut(s)	125, 413, 731, 1121, 1336, 1584
BseNI	ACTGG	6 cut(s)	185, 202, 564, 1023, 1093, 1352
BseRI	GAGGAG	2 cut(s)	648, 1575
BseSI	GKGCMC	2 cut(s)	1184, 1252
BseXI	GCAGC	3 cut(s)	686, 958, 1181
BseYI	CCCAGC	2 cut(s)	540, 1054
BsgI	GTGCAG	2 cut(s)	243, 685
Bsh1236I	CGCG	1 cut(s)	1467
BshFI	GGCC	3 cut(s)	507, 873, 908
BshNI	GGYRCC	4 cut(s)	200, 345, 880, 1247
BsiHKAI	GWGCWC	3 cut(s)	244, 1184, 1585
BsiSI	CCGG	4 cut(s)	308, 338, 870, 1217
BsiWI	CGTACG	1 cut(s)	18
BslFI	GGGAC	2 cut(s)	164, 381
BsmAI	GTCTC	1 cut(s)	288
BsmFI	GGGAC	2 cut(s)	164, 381
BsnI	GGCC	3 cut(s)	507, 873, 908
Bsp1286I	GDGCHC	5 cut(s)	244, 1048, 1184, 1252, 1585
Bsp1407I	TGTACA	1 cut(s)	553
Bsp143I	GATC	5 cut(s)	13, 310, 805, 816, 1135
Bsp1720I	GCTNAGC	1 cut(s)	399
BspACI	CCGC	8 cut(s)	160, 182, 237, 485, 1092, 1210, 1418, 1529
BspANI	GGCC	3 cut(s)	507, 873, 908
BspCNI	CTCAG	6 cut(s)	124, 412, 730, 1122, 1335, 1585
BspFNI	CGCG	1 cut(s)	1467
BspHI	TCATGA	1 cut(s)	955
BspLI	GGNNCC	8 cut(s)	202, 306, 347, 882, 933, 942, 1045, 1249
BspMI	ACCTGC	1 cut(s)	1235
BspPI	GGATC	5 cut(s)	8, 318, 800, 811, 1143
BspT107I	GGYRCC	4 cut(s)	200, 345, 880, 1247
BspTI	CTTAAG	1 cut(s)	1142
BsrDI	GCAATG	1 cut(s)	966
BsrFI	RCCGGY	1 cut(s)	1216
BsrGI	TGTACA	1 cut(s)	553
BsrI	ACTGG	6 cut(s)	185, 202, 564, 1023, 1093, 1352
BssAI	RCCGGY	1 cut(s)	1216
BssECI	CCNNGG	3 cut(s)	338, 1239, 1327
BssMI	GATC	5 cut(s)	13, 310, 805, 816, 1135
BssNI	GRCGYC	2 cut(s)	79, 207
BssT1I	CCWWGG	1 cut(s)	1239
Bst2UI	CCWGG	1 cut(s)	1041
Bst4CI	ACNGT	5 cut(s)	468, 574, 914, 1105, 1113
BstACI	GRCGYC	2 cut(s)	79, 207
BstAFI	CTTAAG	1 cut(s)	1142
BstAPI	GCANNNNNTGC	2 cut(s)	230, 708
BstAUI	TGTACA	1 cut(s)	553
BstC8I	GCNNGC	4 cut(s)	235, 713, 1016, 1020
BstDEI	CTNAG	9 cut(s)	49, 111, 261, 399, 627, 717, 1130, 1322, 1593
BstENI	CCTNNNNNAGG	2 cut(s)	260, 1256
BstF5I	GGATG	7 cut(s)	13, 436, 528, 578, 637, 1030, 1078
BstFNI	CGCG	1 cut(s)	1467
BstHHI	GCGC	2 cut(s)	699, 1302
BstKTI	GATC	5 cut(s)	16, 313, 808, 819, 1138
BstMAI	GTCTC	1 cut(s)	288
BstMBI	GATC	5 cut(s)	13, 310, 805, 816, 1135
BstMWI	GCNNNNNNNGC	7 cut(s)	230, 239, 334, 708, 899, 968, 1589
BstNI	CCWGG	1 cut(s)	1041
BstNSI	RCATGY	3 cut(s)	794, 1018, 1311
BstSCI	CCNGG	3 cut(s)	337, 868, 1039
BstSLI	GKGCMC	2 cut(s)	1184, 1252
BstUI	CGCG	1 cut(s)	1467
BstV1I	GCAGC	3 cut(s)	686, 958, 1181
BstV2I	GAAGAC	1 cut(s)	277
BstX2I	RGATCY	2 cut(s)	805, 1135
BstYI	RGATCY	2 cut(s)	805, 1135
Bsu36I	CCTNAGG	2 cut(s)	627, 717
BsuI	GTATCC	1 cut(s)	407
BsuRI	GGCC	3 cut(s)	507, 873, 908
BtgZI	GCGATG	1 cut(s)	1074
BtrI	CACGTC	1 cut(s)	275
BtsCI	GGATG	7 cut(s)	13, 436, 528, 578, 637, 1030, 1078
BtsIMutI	CAGTG	3 cut(s)	195, 1109, 1359
BveI	ACCTGC	1 cut(s)	1235
Cac8I	GCNNGC	4 cut(s)	235, 713, 1016, 1020
CciI	TCATGA	1 cut(s)	955
CfoI	GCGC	2 cut(s)	699, 1302
Cfr10I	RCCGGY	1 cut(s)	1216
Cfr13I	GGNCC	1 cut(s)	1349
CseI	GACGC	3 cut(s)	87, 1064, 1488
Csp6I	GTAC	8 cut(s)	19, 346, 554, 570, 728, 840, 866, 881
CviAII	CATG	8 cut(s)	281, 785, 791, 956, 1015, 1154, 1163, 1308
CviQI	GTAC	8 cut(s)	19, 346, 554, 570, 728, 840, 866, 881
DdeI	CTNAG	9 cut(s)	49, 111, 261, 399, 627, 717, 1130, 1322, 1593
DpnI	GATC	5 cut(s)	15, 312, 807, 818, 1137
DpnII	GATC	5 cut(s)	13, 310, 805, 816, 1135
DrdI	GACNNNNNNGTC	1 cut(s)	176
DseDI	GACNNNNNNGTC	1 cut(s)	176
EaeI	YGGCCR	3 cut(s)	505, 871, 906
EciI	GGCGGA	2 cut(s)	1107, 1544
Ecl136II	GAGCTC	1 cut(s)	1583
Eco130I	CCWWGG	1 cut(s)	1239
Eco24I	GRGCYC	2 cut(s)	1048, 1585
Eco47I	GGWCC	1 cut(s)	1349
Eco53kI	GAGCTC	1 cut(s)	1583
Eco81I	CCTNAGG	2 cut(s)	627, 717
EcoICRI	GAGCTC	1 cut(s)	1583
EcoNI	CCTNNNNNAGG	2 cut(s)	260, 1256
EcoRII	CCWGG	1 cut(s)	1039
EcoT14I	CCWWGG	1 cut(s)	1239
EcoT38I	GRGCYC	2 cut(s)	1048, 1585
ErhI	CCWWGG	1 cut(s)	1239
FaeI	CATG	8 cut(s)	284, 788, 794, 959, 1018, 1157, 1166, 1311
FaqI	GGGAC	2 cut(s)	164, 381
FatI	CATG	8 cut(s)	280, 784, 790, 955, 1014, 1153, 1162, 1307
FauI	CCCGC	2 cut(s)	189, 478
Fnu4HI	GCNGC	3 cut(s)	700, 972, 1170
FokI	GGATG	7 cut(s)	20, 443, 535, 565, 644, 1017, 1065
FriOI	GRGCYC	2 cut(s)	1048, 1585
Fsp4HI	GCNGC	3 cut(s)	700, 972, 1170
FspBI	CTAG	4 cut(s)	749, 800, 1190, 1482
GlaI	GCGC	2 cut(s)	698, 1301
GluI	GCNGC	3 cut(s)	700, 972, 1170
GsaI	CCCAGC	2 cut(s)	544, 1058
GsuI	CTGGAG	3 cut(s)	317, 581, 1023
HaeIII	GGCC	3 cut(s)	507, 873, 908
HapII	CCGG	4 cut(s)	308, 338, 870, 1217
HgaI	GACGC	3 cut(s)	87, 1064, 1488
HhaI	GCGC	2 cut(s)	699, 1302
Hin1I	GRCGYC	2 cut(s)	79, 207
Hin1II	CATG	8 cut(s)	284, 788, 794, 959, 1018, 1157, 1166, 1311
Hin6I	GCGC	2 cut(s)	697, 1300
HinP1I	GCGC	2 cut(s)	697, 1300
HinfI	GANTC	3 cut(s)	510, 768, 1193
HpaII	CCGG	4 cut(s)	308, 338, 870, 1217
HphI	GGTGA	1 cut(s)	335
Hpy166II	GTNNAC	4 cut(s)	190, 652, 1028, 1182
Hpy188I	TCNGA	7 cut(s)	77, 114, 478, 816, 888, 1117, 1331
Hpy188III	TCNNGA	5 cut(s)	28, 143, 461, 638, 956
Hpy8I	GTNNAC	4 cut(s)	190, 652, 1028, 1182
Hpy99I	CGWCG	4 cut(s)	81, 136, 209, 1504
HpyAV	CCTTC	6 cut(s)	43, 973, 1409, 1464, 1526, 1558
HpyCH4III	ACNGT	5 cut(s)	468, 574, 914, 1105, 1113
HpyCH4IV	ACGT	4 cut(s)	21, 138, 207, 274
HpyF10VI	GCNNNNNNNGC	7 cut(s)	230, 239, 334, 708, 899, 968, 1589
HpyF3I	CTNAG	9 cut(s)	49, 111, 261, 399, 627, 717, 1130, 1322, 1593
HpySE526I	ACGT	4 cut(s)	21, 138, 207, 274
Hsp92I	GRCGYC	2 cut(s)	79, 207
Hsp92II	CATG	8 cut(s)	284, 788, 794, 959, 1018, 1157, 1166, 1311
HspAI	GCGC	2 cut(s)	697, 1300
KpnI	GGTACC	2 cut(s)	349, 884
Kzo9I	GATC	5 cut(s)	13, 310, 805, 816, 1135
LmnI	GCTCC	7 cut(s)	304, 562, 661, 937, 1043, 1478, 1588
Lsp1109I	GCAGC	3 cut(s)	686, 958, 1181
LweI	GCATC	6 cut(s)	385, 949, 1051, 1156, 1232, 1287
MaeI	CTAG	4 cut(s)	749, 800, 1190, 1482
MaeII	ACGT	4 cut(s)	21, 138, 207, 274
MaeIII	GTNAC	1 cut(s)	574
MalI	GATC	5 cut(s)	15, 312, 807, 818, 1137
MboI	GATC	5 cut(s)	13, 310, 805, 816, 1135
MboII	GAAGA	8 cut(s)	28, 127, 282, 386, 448, 602, 931, 1130
MfeI	CAATTG	2 cut(s)	666, 975
MflI	RGATCY	2 cut(s)	805, 1135
MhlI	GDGCHC	5 cut(s)	244, 1048, 1184, 1252, 1585
MlsI	TGGCCA	1 cut(s)	908
MluCI	AATT	8 cut(s)	85, 315, 353, 390, 603, 666, 760, 975
MluI	ACGCGT	1 cut(s)	1465
MluNI	TGGCCA	1 cut(s)	908
MlyI	GAGTC	1 cut(s)	762
MmeI	TCCRAC	3 cut(s)	100, 391, 1058
Mox20I	TGGCCA	1 cut(s)	908
MscI	TGGCCA	1 cut(s)	908
MseI	TTAA	5 cut(s)	426, 606, 645, 1085, 1143
MslI	CAYNNNNRTG	1 cut(s)	789
Msp20I	TGGCCA	1 cut(s)	908
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	4 cut(s)	308, 338, 870, 1217
MspR9I	CCNGG	3 cut(s)	339, 870, 1041
MunI	CAATTG	2 cut(s)	666, 975
MvaI	CCWGG	1 cut(s)	1041
MvnI	CGCG	1 cut(s)	1467
MwoI	GCNNNNNNNGC	7 cut(s)	230, 239, 334, 708, 899, 968, 1589
NciI	CCSGG	2 cut(s)	339, 870
NdeII	GATC	5 cut(s)	13, 310, 805, 816, 1135
NlaIII	CATG	8 cut(s)	284, 788, 794, 959, 1018, 1157, 1166, 1311
NlaIV	GGNNCC	8 cut(s)	202, 306, 347, 882, 933, 942, 1045, 1249
NmeAIII	GCCGAG	1 cut(s)	424
NmuCI	GTSAC	1 cut(s)	574
NspI	RCATGY	3 cut(s)	794, 1018, 1311
PaeI	GCATGC	1 cut(s)	1018
PagI	TCATGA	1 cut(s)	955
PaqCI	CACCTGC	1 cut(s)	1235
PfeI	GAWTC	2 cut(s)	510, 1193
Pfl23II	CGTACG	1 cut(s)	18
PfoI	TCCNGGA	1 cut(s)	1039
PkrI	GCNGC	3 cut(s)	701, 973, 1171
PleI	GAGTC	1 cut(s)	762
PpsI	GAGTC	1 cut(s)	762
Psp124BI	GAGCTC	1 cut(s)	1585
Psp1406I	AACGTT	1 cut(s)	138
Psp6I	CCWGG	1 cut(s)	1039
PspFI	CCCAGC	2 cut(s)	540, 1054
PspGI	CCWGG	1 cut(s)	1039
PspLI	CGTACG	1 cut(s)	18
PspN4I	GGNNCC	8 cut(s)	202, 306, 347, 882, 933, 942, 1045, 1249
PspPI	GGNCC	1 cut(s)	1349
PsuI	RGATCY	2 cut(s)	805, 1135
RsaI	GTAC	8 cut(s)	20, 347, 555, 571, 729, 841, 867, 882
RsaNI	GTAC	8 cut(s)	19, 346, 554, 570, 728, 840, 866, 881
RseI	CAYNNNNRTG	1 cut(s)	789
SacI	GAGCTC	1 cut(s)	1585
SaqAI	TTAA	5 cut(s)	426, 606, 645, 1085, 1143
SatI	GCNGC	3 cut(s)	700, 972, 1170
Sau3AI	GATC	5 cut(s)	13, 310, 805, 816, 1135
Sau96I	GGNCC	1 cut(s)	1349
ScaI	AGTACT	1 cut(s)	729
SchI	GAGTC	1 cut(s)	762
ScrFI	CCNGG	3 cut(s)	339, 870, 1041
SduI	GDGCHC	5 cut(s)	244, 1048, 1184, 1252, 1585
SfaNI	GCATC	6 cut(s)	385, 949, 1051, 1156, 1232, 1287
SinI	GGWCC	1 cut(s)	1349
SmiMI	CAYNNNNRTG	1 cut(s)	789
SmlI	CTYRAG	1 cut(s)	1142
SmoI	CTYRAG	1 cut(s)	1142
SpeI	ACTAGT	1 cut(s)	748
SphI	GCATGC	1 cut(s)	1018
Sse9I	AATT	8 cut(s)	85, 315, 353, 390, 603, 666, 760, 975
SsiI	CCGC	8 cut(s)	160, 182, 237, 485, 1092, 1210, 1418, 1529
SspI	AATATT	1 cut(s)	991
SspMI	CTAG	4 cut(s)	749, 800, 1190, 1482
SstI	GAGCTC	1 cut(s)	1585
StyD4I	CCNGG	3 cut(s)	337, 868, 1039
StyI	CCWWGG	1 cut(s)	1239
TaaI	ACNGT	5 cut(s)	468, 574, 914, 1105, 1113
TaiI	ACGT	4 cut(s)	24, 141, 210, 277
TaqI	TCGA	2 cut(s)	165, 313
TasI	AATT	8 cut(s)	85, 315, 353, 390, 603, 666, 760, 975
TatI	WGTACW	3 cut(s)	553, 727, 839
TfiI	GAWTC	2 cut(s)	510, 1193
Tru1I	TTAA	5 cut(s)	426, 606, 645, 1085, 1143
Tru9I	TTAA	5 cut(s)	426, 606, 645, 1085, 1143
TscAI	CASTG	3 cut(s)	202, 1116, 1359
TseFI	GTSAC	1 cut(s)	574
TseI	GCWGC	3 cut(s)	699, 971, 1169
Tsp45I	GTSAC	1 cut(s)	574
TspDTI	ATGAA	6 cut(s)	269, 502, 944, 955, 1164, 1296
TspGWI	ACGGA	5 cut(s)	6, 186, 317, 839, 1374
TspRI	CASTG	3 cut(s)	202, 1116, 1359
Vha464I	CTTAAG	1 cut(s)	1142
VneI	GTGCAC	1 cut(s)	1180
VpaK11BI	GGWCC	1 cut(s)	1349
XagI	CCTNNNNNAGG	2 cut(s)	260, 1256
XceI	RCATGY	3 cut(s)	794, 1018, 1311
XcmI	CCANNNNNNNNNTGG	2 cut(s)	556, 901
XspI	CTAG	4 cut(s)	749, 800, 1190, 1482
ZraI	GACGTC	1 cut(s)	208
ZrmI	AGTACT	1 cut(s)	729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.