Rroxscaffold_4G00314560

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000108
Physical Location & Seq
Reverse (-)
38563697 .. 38566648
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00314560.1

Sequence Viewer

Length: 1128 bp
ATGGAATTGATGGCAGCGGTAAACGCTGTTGTAAGAGCTTCAATATCTGATTTCGTAACTTCACCCATTGCTACTAAGGAAAATAAAAGAGACAGGGAAGACCTGCTCGATACCACTGACGCAGACGGATTGATAAATTGTGTAAATGAGTCAATTGATGCCCAGGAAGTGTTTGGTTATGCTCTTTACAAAGATGGGAATGATACAACACTGTCTTATCCCTTGAAGAAATACAGTTCAAATGTGGCTGGGAGAAGTTTCCACAATGGCCGTTTTATTCAAAGAATGCGTGAAAAAATTGCAACTCTTTCAAATGTAAAATTGGAACAAGGATCAGTGACAACACTAATCGAGGAAAAGGGCATTGTCAAAGGGGTTATTTACAAGAACAAGGCCGGAGAGGAGCTAAGAACATATGCTCCTCTAACAGTTGTGTGTGATGGCTGCTTTTCAAATCTGCAAAAATCTCTCAGTGCTCCAAAGGTTAAAAGTCCCTCTTGTTTTGTTGGTTTGATCTTGGAGAATTGTGACATTCCACAAGCAAATCATGGGCATGTCATATTGGGAGACCCTTCTCCCATCCTCTTTTATCCTATCAGTTCAACCGAGGTTCGCTGTTTGGTGCATGTACCTGGAACAAAAGTACCTTCAGTAGCTAGTGGTGAGATGGCCAACTATTTGAAAACAGTGGTGGCTCCTCAGGTTCCCCCACAGCTGTACAATGCTTTTATGGCCGCAGTAAAGAAAGGAAACATTAGATCCATGCAAAATAAAAGCATGGCTGCTAATCCTCTTCCTAGTCCTGGTGCAATTTTATTAGGGGATTCATTCAACATGAGGCATCCTTTAACAGGAGGAGGAATGACTGTGGCTCTTTCAGACATTCCTGTGTCATCTACCATAAACACATTGGCAGGTGCTTTGTACAAGGTGTTTTGTGCATCACCTGATCCAGCAAGACAGGAAATGCGTGAAGCCTGTTTCGGCTATTTGAGCCTTGGAGTCATCTACTCCTATGGACCAAGTGCATCAGGCATCATATTCCCCATCATAAAGGGTGAAGGAGTTAGACAGATGTTCTTTCCTGCCACAGTACTAGCATACCACAGATCTCCTCCAGTTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

375

Amino Acids

40.47

Weight (kDa)

8.51

Isoelectric Point (pI)

47.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SE PF08491 140 - 297 2.8e-68 Squalene epoxidase
SE PF08491 297 - 340 1.6e-08 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 905
Acc36I ACCTGC 2 cut(s) 111, 905
AciI CCGC 2 cut(s) 17, 735
AclWI GGATC 3 cut(s) 340, 753, 944
AcoI YGGCCR 3 cut(s) 268, 669, 732
AcuI CTGAAG 1 cut(s) 633
AfaI GTAC 5 cut(s) 630, 645, 719, 926, 1095
AfiI CCNNNNNNNGG 2 cut(s) 803, 851
AgsI TTSAA 9 cut(s) 42, 226, 240, 281, 312, 453, 603, 682, 832
AjnI CCWGG 3 cut(s) 162, 631, 802
AloI GAACNNNNNNTCC 2 cut(s) 403, 435
AluBI AGCT 4 cut(s) 38, 406, 656, 715
AluI AGCT 4 cut(s) 38, 406, 656, 715
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 2 cut(s) 84, 561
AlwI GGATC 3 cut(s) 340, 753, 944
AoxI GGCC 4 cut(s) 268, 393, 669, 732
ApeKI GCWGC 3 cut(s) 14, 444, 782
AspS9I GGNCC 1 cut(s) 1019
AsuHPI GGTGA 4 cut(s) 54, 674, 936, 1070
AvaII GGWCC 1 cut(s) 1019
AxyI CCTNAGG 1 cut(s) 699
BaeI ACNNNNGTAYC 2 cut(s) 627, 660
BalI TGGCCA 1 cut(s) 671
BbsI GAAGAC 1 cut(s) 105
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 3 cut(s) 26, 431, 769
BccI CCATC 6 cut(s) 4, 188, 434, 587, 661, 1055
BceAI ACGGC 1 cut(s) 255
BciT130I CCWGG 3 cut(s) 164, 633, 804
BcoDI GTCTC 2 cut(s) 84, 561
BfaI CTAG 3 cut(s) 657, 798, 1097
BfuAI ACCTGC 2 cut(s) 111, 905
BglII AGATCT 1 cut(s) 1109
BisI GCNGC 4 cut(s) 15, 445, 735, 783
BlsI GCNGC 4 cut(s) 16, 446, 736, 784
BmcAI AGTACT 1 cut(s) 1095
Bme1390I CCNGG 3 cut(s) 164, 633, 804
Bme18I GGWCC 1 cut(s) 1019
BmgT120I GGNCC 1 cut(s) 1019
BmiI GGNNCC 2 cut(s) 696, 705
BmrFI CCNGG 3 cut(s) 164, 633, 804
BmsI GCATC 5 cut(s) 148, 850, 950, 1037, 1044
BpiI GAAGAC 1 cut(s) 105
BpmI CTGGAG 1 cut(s) 1101
BsaI GGTCTC 1 cut(s) 561
BsaJI CCNNGG 3 cut(s) 162, 606, 997
BsaXI ACNNNNNCTCC 2 cut(s) 403, 433
Bsc4I CCNNNNNNNGG 2 cut(s) 803, 851
Bse1I ACTGG 1 cut(s) 1118
Bse21I CCTNAGG 1 cut(s) 699
Bse3DI GCAATG 1 cut(s) 66
BseBI CCWGG 3 cut(s) 164, 633, 804
BseDI CCNNGG 3 cut(s) 162, 606, 997
BseGI GGATG 2 cut(s) 579, 841
BseLI CCNNNNNNNGG 2 cut(s) 803, 851
BseMI GCAATG 1 cut(s) 66
BseMII CTCAG 2 cut(s) 484, 713
BseNI ACTGG 1 cut(s) 1118
BseRI GAGGAG 5 cut(s) 411, 416, 687, 870, 1104
BseXI GCAGC 3 cut(s) 26, 431, 769
BseYI CCCAGC 1 cut(s) 248
BshFI GGCC 4 cut(s) 270, 395, 671, 734
BsiHKAI GWGCWC 1 cut(s) 478
BsiSI CCGG 1 cut(s) 396
BslFI GGGAC 1 cut(s) 477
BslI CCNNNNNNNGG 2 cut(s) 803, 851
BsmAI GTCTC 2 cut(s) 84, 561
BsmFI GGGAC 1 cut(s) 477
BsmI GAATGC 1 cut(s) 291
BsnI GGCC 4 cut(s) 270, 395, 671, 734
Bso31I GGTCTC 1 cut(s) 561
Bsp1286I GDGCHC 1 cut(s) 478
Bsp1407I TGTACA 2 cut(s) 717, 924
Bsp143I GATC 5 cut(s) 332, 513, 758, 949, 1109
BspACI CCGC 2 cut(s) 17, 735
BspANI GGCC 4 cut(s) 270, 395, 671, 734
BspCNI CTCAG 2 cut(s) 483, 712
BspLI GGNNCC 2 cut(s) 696, 705
BspMI ACCTGC 2 cut(s) 111, 905
BspPI GGATC 3 cut(s) 340, 753, 944
BspTNI GGTCTC 1 cut(s) 561
BsrDI GCAATG 1 cut(s) 66
BsrGI TGTACA 2 cut(s) 717, 924
BsrI ACTGG 1 cut(s) 1118
BssECI CCNNGG 3 cut(s) 162, 606, 997
BssMI GATC 5 cut(s) 332, 513, 758, 949, 1109
BssT1I CCWWGG 1 cut(s) 997
Bst2UI CCWGG 3 cut(s) 164, 633, 804
Bst4CI ACNGT 6 cut(s) 213, 236, 430, 688, 868, 1093
Bst6I CTCTTC 1 cut(s) 798
BstAUI TGTACA 2 cut(s) 717, 924
BstDEI CTNAG 4 cut(s) 75, 407, 470, 699
BstENI CCTNNNNNAGG 1 cut(s) 849
BstF5I GGATG 2 cut(s) 579, 841
BstKTI GATC 5 cut(s) 335, 516, 761, 952, 1112
BstMAI GTCTC 2 cut(s) 84, 561
BstMBI GATC 5 cut(s) 332, 513, 758, 949, 1109
BstMWI GCNNNNNNNGC 3 cut(s) 23, 731, 993
BstNI CCWGG 3 cut(s) 164, 633, 804
BstNSI RCATGY 2 cut(s) 557, 629
BstSCI CCNGG 3 cut(s) 162, 631, 802
BstV1I GCAGC 3 cut(s) 26, 431, 769
BstV2I GAAGAC 1 cut(s) 105
BstX2I RGATCY 2 cut(s) 758, 1109
BstYI RGATCY 2 cut(s) 758, 1109
Bsu36I CCTNAGG 1 cut(s) 699
BsuRI GGCC 4 cut(s) 270, 395, 671, 734
BtsCI GGATG 2 cut(s) 579, 841
BtsIMutI CAGTG 5 cut(s) 114, 209, 342, 478, 693
BveI ACCTGC 2 cut(s) 111, 905
Cfr13I GGNCC 1 cut(s) 1019
CseI GACGC 1 cut(s) 128
Csp6I GTAC 5 cut(s) 629, 644, 718, 925, 1094
CviAII CATG 6 cut(s) 548, 554, 626, 763, 778, 835
CviQI GTAC 5 cut(s) 629, 644, 718, 925, 1094
DdeI CTNAG 4 cut(s) 75, 407, 470, 699
DpnI GATC 5 cut(s) 334, 515, 760, 951, 1111
DpnII GATC 5 cut(s) 332, 513, 758, 949, 1109
EaeI YGGCCR 3 cut(s) 268, 669, 732
Eam1104I CTCTTC 1 cut(s) 798
EarI CTCTTC 1 cut(s) 798
Eco130I CCWWGG 1 cut(s) 997
Eco31I GGTCTC 1 cut(s) 561
Eco47I GGWCC 1 cut(s) 1019
Eco57I CTGAAG 1 cut(s) 633
Eco81I CCTNAGG 1 cut(s) 699
EcoNI CCTNNNNNAGG 1 cut(s) 849
EcoRII CCWGG 3 cut(s) 162, 631, 802
EcoT14I CCWWGG 1 cut(s) 997
ErhI CCWWGG 1 cut(s) 997
FaeI CATG 6 cut(s) 551, 557, 629, 766, 781, 838
FalI AAGNNNNNCTT 2 cut(s) 481, 513
FaqI GGGAC 1 cut(s) 477
FatI CATG 6 cut(s) 547, 553, 625, 762, 777, 834
FauNDI CATATG 1 cut(s) 415
Fnu4HI GCNGC 4 cut(s) 15, 445, 735, 783
FokI GGATG 2 cut(s) 566, 828
Fsp4HI GCNGC 4 cut(s) 15, 445, 735, 783
FspBI CTAG 3 cut(s) 657, 798, 1097
GluI GCNGC 4 cut(s) 15, 445, 735, 783
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 1 cut(s) 1101
HaeIII GGCC 4 cut(s) 270, 395, 671, 734
HapII CCGG 1 cut(s) 396
HgaI GACGC 1 cut(s) 128
Hin1II CATG 6 cut(s) 551, 557, 629, 766, 781, 838
HinfI GANTC 3 cut(s) 149, 824, 1002
HpaII CCGG 1 cut(s) 396
HphI GGTGA 4 cut(s) 54, 674, 936, 1070
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 49, 880
Hpy8I GTNNAC 1 cut(s) 22
HpyAV CCTTC 3 cut(s) 582, 657, 1055
HpyCH4III ACNGT 6 cut(s) 213, 236, 430, 688, 868, 1093
HpyCH4V TGCA 7 cut(s) 302, 460, 625, 766, 809, 941, 1028
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 731, 993
HpyF3I CTNAG 4 cut(s) 75, 407, 470, 699
Hsp92II CATG 6 cut(s) 551, 557, 629, 766, 781, 838
Kzo9I GATC 5 cut(s) 332, 513, 758, 949, 1109
LmnI GCTCC 4 cut(s) 403, 424, 481, 700
Lsp1109I GCAGC 3 cut(s) 26, 431, 769
LweI GCATC 5 cut(s) 148, 850, 950, 1037, 1044
MaeI CTAG 3 cut(s) 657, 798, 1097
MaeIII GTNAC 3 cut(s) 55, 337, 527
MalI GATC 5 cut(s) 334, 515, 760, 951, 1111
MboI GATC 5 cut(s) 332, 513, 758, 949, 1109
MboII GAAGA 3 cut(s) 110, 238, 785
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 2 cut(s) 758, 1109
MhlI GDGCHC 1 cut(s) 478
MlsI TGGCCA 1 cut(s) 671
MluCI AATT 7 cut(s) 5, 136, 153, 297, 320, 523, 810
MluNI TGGCCA 1 cut(s) 671
MlyI GAGTC 2 cut(s) 158, 1011
Mox20I TGGCCA 1 cut(s) 671
MscI TGGCCA 1 cut(s) 671
MseI TTAA 3 cut(s) 486, 848, 1126
MslI CAYNNNNRTG 2 cut(s) 552, 887
Msp20I TGGCCA 1 cut(s) 671
MspA1I CMGCKG 2 cut(s) 17, 715
MspI CCGG 1 cut(s) 396
MspR9I CCNGG 3 cut(s) 164, 633, 804
MunI CAATTG 1 cut(s) 153
Mva1269I GAATGC 1 cut(s) 291
MvaI CCWGG 3 cut(s) 164, 633, 804
MwoI GCNNNNNNNGC 3 cut(s) 23, 731, 993
NdeI CATATG 1 cut(s) 415
NdeII GATC 5 cut(s) 332, 513, 758, 949, 1109
NlaIII CATG 6 cut(s) 551, 557, 629, 766, 781, 838
NlaIV GGNNCC 2 cut(s) 696, 705
NmuCI GTSAC 2 cut(s) 337, 527
NspI RCATGY 2 cut(s) 557, 629
PaqCI CACCTGC 1 cut(s) 905
PctI GAATGC 1 cut(s) 291
PfeI GAWTC 1 cut(s) 824
PkrI GCNGC 4 cut(s) 16, 446, 736, 784
PleI GAGTC 2 cut(s) 157, 1010
PpsI GAGTC 2 cut(s) 157, 1010
Psp6I CCWGG 3 cut(s) 162, 631, 802
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 3 cut(s) 162, 631, 802
PspN4I GGNNCC 2 cut(s) 696, 705
PspPI GGNCC 1 cut(s) 1019
PsuI RGATCY 2 cut(s) 758, 1109
PvuII CAGCTG 1 cut(s) 715
RsaI GTAC 5 cut(s) 630, 645, 719, 926, 1095
RsaNI GTAC 5 cut(s) 629, 644, 718, 925, 1094
RseI CAYNNNNRTG 2 cut(s) 552, 887
SaqAI TTAA 3 cut(s) 486, 848, 1126
SatI GCNGC 4 cut(s) 15, 445, 735, 783
Sau3AI GATC 5 cut(s) 332, 513, 758, 949, 1109
Sau96I GGNCC 1 cut(s) 1019
ScaI AGTACT 1 cut(s) 1095
SchI GAGTC 2 cut(s) 158, 1011
ScrFI CCNGG 3 cut(s) 164, 633, 804
SduI GDGCHC 1 cut(s) 478
SfaNI GCATC 5 cut(s) 148, 850, 950, 1037, 1044
SinI GGWCC 1 cut(s) 1019
SmiMI CAYNNNNRTG 2 cut(s) 552, 887
Sse9I AATT 7 cut(s) 5, 136, 153, 297, 320, 523, 810
SsiI CCGC 2 cut(s) 17, 735
SspMI CTAG 3 cut(s) 657, 798, 1097
StyD4I CCNGG 3 cut(s) 162, 631, 802
StyI CCWWGG 1 cut(s) 997
TaaI ACNGT 6 cut(s) 213, 236, 430, 688, 868, 1093
TaqI TCGA 2 cut(s) 108, 351
TasI AATT 7 cut(s) 5, 136, 153, 297, 320, 523, 810
TatI WGTACW 3 cut(s) 717, 924, 1093
TauI GCSGC 1 cut(s) 737
TfiI GAWTC 1 cut(s) 824
Tru1I TTAA 3 cut(s) 486, 848, 1126
Tru9I TTAA 3 cut(s) 486, 848, 1126
TscAI CASTG 5 cut(s) 121, 216, 342, 478, 693
TseFI GTSAC 2 cut(s) 337, 527
TseI GCWGC 3 cut(s) 14, 444, 782
Tsp45I GTSAC 2 cut(s) 337, 527
TspDTI ATGAA 2 cut(s) 816, 1112
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 5 cut(s) 121, 216, 342, 478, 693
VpaK11BI GGWCC 1 cut(s) 1019
XagI CCTNNNNNAGG 1 cut(s) 849
XceI RCATGY 2 cut(s) 557, 629
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 907
XspI CTAG 3 cut(s) 657, 798, 1097
ZrmI AGTACT 1 cut(s) 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.