MD07G1041800.v1.1

Squalene monooxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000108
Physical Location & Seq
Forward (+)
3487831 .. 3489932
2102 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1041800.v1.1.491

Sequence Viewer

Length: 1050 bp
ATGGTTTATGAGTACGTTCTTGCTGGTGTCTTGGTTTCTCTGTTGAGTTCTGTTTTCTTCGTCATCATAAACAACACTTTCAGCGAAAAGAAGAAGGACGATGTCGCAAACGTGTCGGCAACCGGTGTTTTTCTTGCGCCCGAGATTGAGAAAAGTACTGACGTTGTCATTGTCGGTGCTGGAGTTGCTGGTGCTGCTCTTGCTTACACTCTTGGCAAGGAAGGACGGCGTGTACATGTGATCGAAAGGGACCTCAACGAGCCAGATAGAATTGTTGGTGAACTATTGCAGCCTGGAGGCTATCTCAAGTTGATTGAATTAGGTCTTGAAGATTGTGCTAATGAGTCCATTGATGCTCAGAAAGTGTTTGGTTATGCTCTTTACAAAAATGGCAATGACACGAAACTGTCTTATCCCTTGGAAACATACAGTTCAGATATCGCTGGGAGAAGTTTCCACAACGGGCGTTTCATCCAAAGGATGCGCGAAAGGGCTACAACTCTTCCAAATGTGAAATTGGTACAAGGAACAGTGACAACACTACTCGAAGAAAAGGGCACCGTCAAAGGAGTGATGTACAAGAACAAGGCTGGAGAGGAGATGAGAACATATGCTCCGCTAACAATAGTGTGCGATGGATGCTTTTCAAATCTGCGTCGCTCTATTTCTACTCCAAATATTGAAAATCCGTCCTGCTTCGTCGGATTGATCTTGGAGAACTGTGAGCTTCCTCATGCAAATCATGGACATGTGATTCTGGGAGACCCTTCACCCATCCTGTTTTATCCTATCAGTAGAACCGAGGTTCGTTGTTTGGTAGATGTTCCTGGCACAAAAGTACCTTCAGTAGCTAACGGCGAAATGGCTTGGTATTTGAAAACTGTCGTGGCTCCTCAGGTTCCCCATCAGCTCTTAAAGGCTTTTCTAGCAGCGGTTGATAAAGGAATCATCAGAACAATGCAAAACAAAAGCATGCCGGCTGCTCCACAGCCCACTCCTGGTGCAATTTTACTGGGGGATGCTTTTGTTGGTATATGGTCCAGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

350

Amino Acids

37.94

Weight (kDa)

6.33

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 53 - 244 1.9e-14 FAD binding domain
DAO PF01266 54 - 84 6.1e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 57 - 83 8.3e-06 NAD(P)-binding Rossmann-like domain
SE PF08491 205 - 342 1.1e-54 Squalene epoxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 557
AccII CGCG 1 cut(s) 486
AciI CCGC 2 cut(s) 617, 932
AcuI CTGAAG 1 cut(s) 828
AfaI GTAC 6 cut(s) 14, 157, 234, 522, 578, 840
AfiI CCNNNNNNNGG 1 cut(s) 998
AflIII ACRYGT 3 cut(s) 111, 235, 748
AgeI ACCGGT 1 cut(s) 122
AgsI TTSAA 5 cut(s) 317, 329, 648, 683, 877
AjnI CCWGG 3 cut(s) 292, 826, 997
AloI GAACNNNNNNTCC 2 cut(s) 598, 630
AluBI AGCT 3 cut(s) 727, 851, 910
AluI AGCT 3 cut(s) 727, 851, 910
Alw26I GTCTC 1 cut(s) 756
Ama87I CYCGRG 1 cut(s) 140
ApeKI GCWGC 4 cut(s) 194, 289, 929, 980
AsiGI ACCGGT 1 cut(s) 122
AspLEI GCGC 2 cut(s) 139, 486
AspS9I GGNCC 2 cut(s) 250, 1038
AsuHPI GGTGA 2 cut(s) 290, 762
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 2 cut(s) 250, 1038
AxyI CCTNAGG 1 cut(s) 894
BaeGI GKGCMC 1 cut(s) 560
BaeI ACNNNNGTAYC 2 cut(s) 822, 855
BanI GGYRCC 1 cut(s) 557
BbvI GCAGC 4 cut(s) 181, 301, 941, 967
BccI CCATC 3 cut(s) 629, 782, 912
BceAI ACGGC 2 cut(s) 242, 871
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 3 cut(s) 294, 828, 999
BcoDI GTCTC 1 cut(s) 756
BfaI CTAG 1 cut(s) 926
BisI GCNGC 4 cut(s) 195, 290, 930, 981
BlsI GCNGC 4 cut(s) 196, 291, 931, 982
BmcAI AGTACT 1 cut(s) 157
Bme1390I CCNGG 3 cut(s) 294, 828, 999
Bme18I GGWCC 2 cut(s) 250, 1038
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 2 cut(s) 250, 1038
BmiI GGNNCC 4 cut(s) 251, 559, 891, 900
BmrFI CCNGG 3 cut(s) 294, 828, 999
BmrI ACTGGG 1 cut(s) 1022
BmsI GCATC 4 cut(s) 343, 471, 629, 1009
BmuI ACTGGG 1 cut(s) 1022
BplI GAGNNNNNCTC 2 cut(s) 288, 320
BpmI CTGGAG 3 cut(s) 201, 315, 612
BpuEI CTTGAG 1 cut(s) 290
BsaI GGTCTC 1 cut(s) 756
BsaJI CCNNGG 2 cut(s) 417, 801
BsaWI WCCGGW 1 cut(s) 122
BsaXI ACNNNNNCTCC 2 cut(s) 598, 628
Bsc4I CCNNNNNNNGG 1 cut(s) 998
Bse118I RCCGGY 2 cut(s) 122, 976
Bse1I ACTGG 1 cut(s) 1017
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 3 cut(s) 294, 828, 999
BseDI CCNNGG 2 cut(s) 417, 801
BseGI GGATG 5 cut(s) 471, 486, 644, 774, 1024
BseLI CCNNNNNNNGG 1 cut(s) 998
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 2 cut(s) 371, 908
BseNI ACTGG 1 cut(s) 1017
BseRI GAGGAG 2 cut(s) 611, 882
BseSI GKGCMC 1 cut(s) 560
BseXI GCAGC 4 cut(s) 181, 301, 941, 967
BseYI CCCAGC 1 cut(s) 443
Bsh1236I CGCG 1 cut(s) 486
BshNI GGYRCC 1 cut(s) 557
BshTI ACCGGT 1 cut(s) 122
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 2 cut(s) 123, 977
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 1 cut(s) 998
BsmAI GTCTC 1 cut(s) 756
BsmFI GGGAC 1 cut(s) 263
Bso31I GGTCTC 1 cut(s) 756
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 560
Bsp1407I TGTACA 2 cut(s) 232, 576
Bsp143I GATC 2 cut(s) 240, 708
BspACI CCGC 2 cut(s) 617, 932
BspCNI CTCAG 2 cut(s) 370, 907
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 4 cut(s) 251, 559, 891, 900
BspT107I GGYRCC 1 cut(s) 557
BspTNI GGTCTC 1 cut(s) 756
BsrDI GCAATG 1 cut(s) 400
BsrFI RCCGGY 2 cut(s) 122, 976
BsrGI TGTACA 2 cut(s) 232, 576
BsrI ACTGG 1 cut(s) 1017
BssAI RCCGGY 2 cut(s) 122, 976
BssECI CCNNGG 2 cut(s) 417, 801
BssMI GATC 2 cut(s) 240, 708
BssT1I CCWWGG 1 cut(s) 417
Bst2UI CCWGG 3 cut(s) 294, 828, 999
Bst4CI ACNGT 6 cut(s) 408, 431, 532, 562, 722, 883
Bst6I CTCTTC 1 cut(s) 507
BstAUI TGTACA 2 cut(s) 232, 576
BstC8I GCNNGC 2 cut(s) 974, 978
BstDEI CTNAG 2 cut(s) 357, 894
BstF5I GGATG 5 cut(s) 471, 486, 644, 774, 1024
BstFNI CGCG 1 cut(s) 486
BstHHI GCGC 2 cut(s) 139, 486
BstKTI GATC 2 cut(s) 243, 711
BstMAI GTCTC 1 cut(s) 756
BstMBI GATC 2 cut(s) 240, 708
BstMWI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
BstNI CCWGG 3 cut(s) 294, 828, 999
BstNSI RCATGY 3 cut(s) 239, 752, 976
BstSCI CCNGG 3 cut(s) 292, 826, 997
BstSLI GKGCMC 1 cut(s) 560
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 4 cut(s) 181, 301, 941, 967
Bsu36I CCTNAGG 1 cut(s) 894
BtgZI GCGATG 1 cut(s) 648
BtsCI GGATG 5 cut(s) 471, 486, 644, 774, 1024
BtsIMutI CAGTG 1 cut(s) 537
Cac8I GCNNGC 2 cut(s) 974, 978
CfoI GCGC 2 cut(s) 139, 486
Cfr10I RCCGGY 2 cut(s) 122, 976
Cfr13I GGNCC 2 cut(s) 250, 1038
CseI GACGC 1 cut(s) 644
Csp6I GTAC 6 cut(s) 13, 156, 233, 521, 577, 839
CspAI ACCGGT 1 cut(s) 122
CviAII CATG 6 cut(s) 236, 734, 743, 749, 973, 1047
CviQI GTAC 6 cut(s) 13, 156, 233, 521, 577, 839
DdeI CTNAG 2 cut(s) 357, 894
DpnI GATC 2 cut(s) 242, 710
DpnII GATC 2 cut(s) 240, 708
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Eco130I CCWWGG 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 756
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 2 cut(s) 250, 1038
Eco57I CTGAAG 1 cut(s) 828
Eco81I CCTNAGG 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 3 cut(s) 292, 826, 997
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 417
ErhI CCWWGG 1 cut(s) 417
FaeI CATG 6 cut(s) 239, 737, 746, 752, 976, 1050
FaqI GGGAC 1 cut(s) 263
FatI CATG 6 cut(s) 235, 733, 742, 748, 972, 1046
FauNDI CATATG 1 cut(s) 610
Fnu4HI GCNGC 4 cut(s) 195, 290, 930, 981
FokI GGATG 5 cut(s) 458, 493, 651, 761, 1031
Fsp4HI GCNGC 4 cut(s) 195, 290, 930, 981
FspBI CTAG 1 cut(s) 926
GlaI GCGC 2 cut(s) 138, 485
GluI GCNGC 4 cut(s) 195, 290, 930, 981
GsaI CCCAGC 1 cut(s) 447
GsuI CTGGAG 3 cut(s) 201, 315, 612
HapII CCGG 2 cut(s) 123, 977
HgaI GACGC 1 cut(s) 644
HhaI GCGC 2 cut(s) 139, 486
Hin1II CATG 6 cut(s) 239, 737, 746, 752, 976, 1050
Hin6I GCGC 2 cut(s) 137, 484
HinP1I GCGC 2 cut(s) 137, 484
HinfI GANTC 3 cut(s) 344, 754, 945
HpaII CCGG 2 cut(s) 123, 977
HphI GGTGA 2 cut(s) 290, 762
Hpy166II GTNNAC 2 cut(s) 233, 281
Hpy188I TCNGA 4 cut(s) 360, 436, 704, 953
Hpy188III TCNNGA 1 cut(s) 326
Hpy8I GTNNAC 2 cut(s) 233, 281
Hpy99I CGWCG 2 cut(s) 660, 704
HpyAV CCTTC 4 cut(s) 88, 215, 777, 852
HpyCH4III ACNGT 6 cut(s) 408, 431, 532, 562, 722, 883
HpyCH4IV ACGT 3 cut(s) 15, 111, 162
HpyCH4V TGCA 4 cut(s) 289, 737, 961, 1004
HpyF10VI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
HpyF3I CTNAG 2 cut(s) 357, 894
HpySE526I ACGT 3 cut(s) 15, 111, 162
Hsp92II CATG 6 cut(s) 239, 737, 746, 752, 976, 1050
HspAI GCGC 2 cut(s) 137, 484
KroI GCCGGC 1 cut(s) 976
KroNI GCCGGC 1 cut(s) 978
Kzo9I GATC 2 cut(s) 240, 708
LmnI GCTCC 3 cut(s) 619, 895, 988
Lsp1109I GCAGC 4 cut(s) 181, 301, 941, 967
LweI GCATC 4 cut(s) 343, 471, 629, 1009
MaeI CTAG 1 cut(s) 926
MaeII ACGT 3 cut(s) 15, 111, 162
MaeIII GTNAC 1 cut(s) 532
MalI GATC 2 cut(s) 242, 710
MboI GATC 2 cut(s) 240, 708
MboII GAAGA 5 cut(s) 49, 103, 341, 494, 560
MhlI GDGCHC 1 cut(s) 560
MluCI AATT 4 cut(s) 270, 317, 515, 1005
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 1 cut(s) 682
MnlI CCTC 6 cut(s) 263, 290, 589, 741, 796, 903
MroNI GCCGGC 1 cut(s) 976
MseI TTAA 1 cut(s) 914
MslI CAYNNNNRTG 1 cut(s) 747
MspA1I CMGCKG 1 cut(s) 932
MspI CCGG 2 cut(s) 123, 977
MspR9I CCNGG 3 cut(s) 294, 828, 999
MvaI CCWGG 3 cut(s) 294, 828, 999
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 5 cut(s) 185, 194, 200, 639, 926
NaeI GCCGGC 1 cut(s) 978
NdeI CATATG 1 cut(s) 610
NdeII GATC 2 cut(s) 240, 708
NgoMIV GCCGGC 1 cut(s) 976
NlaIII CATG 6 cut(s) 239, 737, 746, 752, 976, 1050
NlaIV GGNNCC 4 cut(s) 251, 559, 891, 900
NmuCI GTSAC 1 cut(s) 532
NspI RCATGY 3 cut(s) 239, 752, 976
PaeI GCATGC 1 cut(s) 976
PciI ACATGT 2 cut(s) 235, 748
PdiI GCCGGC 1 cut(s) 978
PfeI GAWTC 2 cut(s) 754, 945
PflFI GACNNNGTC 2 cut(s) 101, 164
PinAI ACCGGT 1 cut(s) 122
PkrI GCNGC 4 cut(s) 196, 291, 931, 982
PleI GAGTC 1 cut(s) 352
PpsI GAGTC 1 cut(s) 352
PpuMI RGGWCCY 1 cut(s) 250
PscI ACATGT 2 cut(s) 235, 748
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 3 cut(s) 292, 826, 997
PspFI CCCAGC 1 cut(s) 443
PspGI CCWGG 3 cut(s) 292, 826, 997
PspN4I GGNNCC 4 cut(s) 251, 559, 891, 900
PspPI GGNCC 2 cut(s) 250, 1038
PspPPI RGGWCCY 1 cut(s) 250
PsyI GACNNNGTC 2 cut(s) 101, 164
RsaI GTAC 6 cut(s) 14, 157, 234, 522, 578, 840
RsaNI GTAC 6 cut(s) 13, 156, 233, 521, 577, 839
RseI CAYNNNNRTG 1 cut(s) 747
SaqAI TTAA 1 cut(s) 914
SatI GCNGC 4 cut(s) 195, 290, 930, 981
Sau3AI GATC 2 cut(s) 240, 708
Sau96I GGNCC 2 cut(s) 250, 1038
ScaI AGTACT 1 cut(s) 157
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 3 cut(s) 294, 828, 999
SduI GDGCHC 1 cut(s) 560
SfaNI GCATC 4 cut(s) 343, 471, 629, 1009
SinI GGWCC 2 cut(s) 250, 1038
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
SphI GCATGC 1 cut(s) 976
Sse9I AATT 4 cut(s) 270, 317, 515, 1005
SsiI CCGC 2 cut(s) 617, 932
SspI AATATT 1 cut(s) 679
SspMI CTAG 1 cut(s) 926
StyD4I CCNGG 3 cut(s) 292, 826, 997
StyI CCWWGG 1 cut(s) 417
TaaI ACNGT 6 cut(s) 408, 431, 532, 562, 722, 883
TaiI ACGT 3 cut(s) 18, 114, 165
TaqI TCGA 2 cut(s) 243, 546
TasI AATT 4 cut(s) 270, 317, 515, 1005
TatI WGTACW 3 cut(s) 155, 232, 576
TfiI GAWTC 2 cut(s) 754, 945
Tru1I TTAA 1 cut(s) 914
Tru9I TTAA 1 cut(s) 914
TscAI CASTG 1 cut(s) 537
TseFI GTSAC 1 cut(s) 532
TseI GCWGC 4 cut(s) 194, 289, 929, 980
Tsp45I GTSAC 1 cut(s) 532
TspDTI ATGAA 1 cut(s) 460
TspGWI ACGGA 1 cut(s) 678
TspRI CASTG 1 cut(s) 537
Tth111I GACNNNGTC 2 cut(s) 101, 164
VpaK11BI GGWCC 2 cut(s) 250, 1038
XceI RCATGY 3 cut(s) 239, 752, 976
XspI CTAG 1 cut(s) 926
ZrmI AGTACT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.