Rorug04G0158200

squalene

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000108
Physical Location & Seq
Reverse (-)
27576866 .. 27578215
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0158200.1

Sequence Viewer

Length: 1035 bp
ATGGAGAAGCTTGTTTCTAGCTGGTACAATAATGTTCAACCCCTGCCCGAGACTTACATATTCCCACCCAATGCAAGACCGGGGAAGCTTAGCACTCTTCCTTCATCTGACAACATTCCAGTGATTAATCTTGGTGGTGGTGGAGCAGAAGGTCATGATCGAACTCGTATAGTTGAGCAAATACTTGAGGCTAGCCAAGAGTTCGGGTTTTTTCAGGTAATCAACCATGGCATATCAGAAAATTTGTTGCATGACACCATGGATGTGTTCAGGGAGTTTTTTGCTTTGCCTCCAGAAGACAAGGCAAGCTTCTTCTCTGAGGACCCCAACAAACTCTGCAGGCTCATAACTAGCACCGGAAATTATGACAGGGAGAATGTTCATCTCTGGCGCGATGCCCTCCGACACCCTTGTCACCCTCTAGAAAAATTCATTCCACTTTGGCCTCAACAACCGCTTAAATATCGAGAGCATGTTGGCAAATGTTCCACCCAAGTGAGGAAAGTAGCTTTGAACATTTTAGACTTGATCAGTGAAGGACTTGGGATTGGATATGGGCACTTCAGTGATGAACTTAGCCAAGAGACTCTACTCTCAGTTAATTATTATCCACCTTGTCCAGATCCAAGTTTGACATTAGGAATAACTAAACACTGTGATCCAAACCTCATCACAATTTTACTTCAAGGGGATGTACATGGCCTTCAGGTTTTTAAGGATGGGGAATGGATTGGTGTGGAACCTCTTCCGCAAGGACTAGTGGTTAACATAGGCTATCAGTTACAGATCATAAGTAATGGGAAGCTGAAGTGTGCTGAACATCGAGCAGTGACAAATTCAAGTAATGCTCGGACATCTGCTGCATTTTTCATTGCACCTTCCCAGGATTGCCATATACAGCCTGCAGCAGCTCTTATCAATGCAAGTAATCCTCAAATCTATAAGGGCTTCCAATACAAAGAGTTCCTTTCCAACTACCTAATGAAGCAGGGCAACACCGAAGTTGTACTTGAGCCCTTTAAACTCCAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130
Pfam Domains
Protein Families
SE

Protein Analysis

344

Amino Acids

38.56

Weight (kDa)

5.73

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 39 - 150 5e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 197 - 293 2e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22830 AT4G37760
fragaria_vesca FvH4_1g18300 FvH4_1g20540 FvH4_2g02580 FvH4_2g02590 FvH4_2g02590 FvH4_2g02590 FvH4_2g02600 FvH4_2g02650 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02652 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_2g02660 FvH4_4g14040 FvH4_4g14050
malus_domestica MD00G1080800.v1.1 MD02G1190300.v1.1 MD02G1272900.v1.1 MD05G1111800.v1.1 MD05G1112000.v1.1 MD05G1112100.v1.1 MD05G1112200.v1.1 MD07G1041500.v1.1 MD07G1041600.v1.1 MD07G1041700.v1.1 MD07G1041800.v1.1 MD07G1041900.v1.1 MD07G1042000.v1.1 MD10G1114800.v1.1 MD15G1301500.v1.1
prunus_persica Prupe.6G216100_v2.0.a1 Prupe.8G156600_v2.0.a1 Prupe.8G156800_v2.0.a1
pyrus_communis pycom02g15440 pycom02g15450 pycom02g23370 pycom02g23380 pycom05g10720 pycom05g10730 pycom05g10770 pycom07g02910 pycom07g02920 pycom07g02930 pycom07g02940 pycom07g02950 pycom07g02960 pycom10g09930 pycom15g26420 pycom15g26430
rosa_chinensis RchiOBHm_Chr1g0337291 RchiOBHm_Chr1g0337301 RchiOBHm_Chr2g0108881 RchiOBHm_Chr2g0108891 RchiOBHm_Chr2g0108921 RchiOBHm_Chr4g0411471 RchiOBHm_Chr4g0411481 RchiOBHm_Chr4g0411491 RchiOBHm_Chr4g0419301 RchiOBHm_Chr4g0419311 RchiOBHm_Chr4g0419381 RchiOBHm_Chr4g0419391 RchiOBHm_Chr4g0419471 RchiOBHm_Chr4g0419611 RchiOBHm_Chr6g0246411 RchiOBHm_Chr6g0246421 RchiOBHm_Chr6g0246521 RchiOBHm_Chr6g0246791 RchiOBHm_Chr6g0246801 RchiOBHm_Chr6g0246811 RchiOBHm_Chr6g0246841 RchiOBHm_Chr6g0246851 RchiOBHm_Chr6g0246941 RchiOBHm_Chr6g0246951 RchiOBHm_Chr6g0246961 RchiOBHm_Chr6g0246981 RchiOBHm_Chr6g0246991 RchiOBHm_Chr6g0247001 RchiOBHm_Chr7g0177171 RchiOBHm_Chr7g0177181 RchiOBHm_Chr7g0177191
rosa_laevigata RLG00000007810 RLG00000007811 RLG00000007817 RLG00000008351 RLG00000008352 RLG00000008353 RLG00000013274 RLG00000014276 RLG00000015230 RLG00000015231 RLG00000015232 RLG00000015236 RLG00000015237 RLG00000015238 RLG00000015239 RLG00000015240 RLG00000015244 RLG00000015245 RLG00000015246 RLG00000015247 RLG00000017694 RLG00000029286
rosa_multiflora Rmu_co7985368.1_g000001 Rmu_co8117354.1_g000001 Rmu_co8129060.1_g000001 Rmu_co8143900.1_g000001 Rmu_co8230369.1_g000001 Rmu_co8341411.1_g000001 Rmu_co8365495.1_g000001 Rmu_co8367749.1_g000001 Rmu_co8422277.1_g000001 Rmu_sc0000455.1_g000001 Rmu_sc0000989.1_g000003 Rmu_sc0001293.1_g000004 Rmu_sc0001293.1_g000005 Rmu_sc0001293.1_g000006 Rmu_sc0001293.1_g000007 Rmu_sc0001982.1_g000018 Rmu_sc0001982.1_g000019 Rmu_sc0002539.1_g000051 Rmu_sc0003387.1_g000001 Rmu_sc0004469.1_g000022 Rmu_sc0004830.1_g000004 Rmu_sc0004932.1_g000010 Rmu_sc0005310.1_g000017 Rmu_sc0006222.1_g000001 Rmu_sc0006767.1_g000002 Rmu_sc0006875.1_g000001 Rmu_sc0009831.1_g000001 Rmu_sc0009831.1_g000002 Rmu_sc0009831.1_g000003 Rmu_sc0010547.1_g000017 Rmu_sc0012369.1_g000005 Rmu_sc0012369.1_g000006 Rmu_sc0017606.1_g000010 Rmu_sc0018495.1_g000001 Rmu_sc0018495.1_g000002 Rmu_sc0024638.1_g000002 Rmu_sc0031581.1_g000001 Rmu_sc0032897.1_g000005 Rmu_sc0037307.1_g000001 Rmu_sc0038108.1_g000001 Rmu_sc0041017.1_g000001
rosa_roxburghii Rroxscaffold_176G00431650 Rroxscaffold_2G00134690 Rroxscaffold_2G00134720 Rroxscaffold_4G00314560 Rroxscaffold_4G00326020 Rroxscaffold_5G00356060 Rroxscaffold_5G00356070 Rroxscaffold_5G00362290 Rroxscaffold_5G00362330 Rroxscaffold_5G00362340 Rroxscaffold_5G00362440 Rroxscaffold_5G00362450 Rroxscaffold_7G00203370 Rroxscaffold_7G00214390 Rroxscaffold_7G00214400 Rroxscaffold_7G00214410 Rroxscaffold_7G00214430 Rroxscaffold_7G00214440 Rroxscaffold_7G00214450 Rroxscaffold_7G00214460 Rroxscaffold_7G00214500
rosa_rugosa Rorug01G0134000.1 Rorug01G0134100.1 Rorug01G0134200.1 Rorug02G0156600 Rorug02G0156700 Rorug04G0108500 Rorug04G0108600 Rorug04G0158200 Rorug04G0158500 Rorug04G0158600 Rorug05G0521200 Rorug05G0521300 Rorug05G0521300 Rorug05G0521500 Rorug05G0521600 Rorug05G0521700 Rorug05G0521800 Rorug05G0521900 Rorug06G0011500
rosa_samantha Rh1AG153200 Rh1AG153300 Rh1CG060800 Rh1CG144100 Rh1CG144200 Rh1DG064800 Rh1DG160800 Rh1DG160900 Rh1DG161000 Rh2AG207100 Rh2AG207200 Rh2DG213300 Rh2DG213400 Rh4AG168400 Rh4AG168500 Rh4AG220000 Rh4CG179900 Rh4CG232800 Rh4DG162800 Rh4DG219200 Rh4DG219300 Rh6AG035000 Rh6AG035900 Rh6AG036000 Rh6AG036200 Rh6AG036300 Rh6AG036600 Rh6BG030600 Rh6BG030700 Rh6BG030800 Rh6BG031000 Rh6BG031300 Rh6BG031400 Rh6CG031200 Rh6CG031500 Rh6CG031600 Rh6CG031700 Rh6CG031800 Rh6CG031900 Rh6CG032000 Rh7AG003800
rosa_wichuraiana Rw1G012540 Rw1G012550 Rw2G016450 Rw4G013990 Rw4G014000 Rw4G018830 Rw4G018850 Rw4G018960 Rw4G018970 Rw6G002850 Rw6G003030 Rw6G003040 Rw6G003050 Rw6G003060 Rw6G003100 Rw6G003110 Rw6G003140 Rw6G003150 Rw7G000310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 411
AccII CGCG 1 cut(s) 393
AciI CCGC 2 cut(s) 455, 749
AclWI GGATC 2 cut(s) 617, 653
AcsI RAATTY 4 cut(s) 241, 428, 835, 1029
AcuI CTGAAG 3 cut(s) 547, 689, 827
AfaI GTAC 3 cut(s) 26, 696, 1008
AfiI CCNNNNNNNGG 1 cut(s) 498
AgsI TTSAA 4 cut(s) 38, 514, 686, 840
AhlI ACTAGT 1 cut(s) 757
AjnI CCWGG 1 cut(s) 882
AleI CACNNNNGTG 2 cut(s) 494, 564
AluBI AGCT 7 cut(s) 10, 21, 88, 309, 509, 805, 911
AluI AGCT 7 cut(s) 10, 21, 88, 309, 509, 805, 911
Alw26I GTCTC 2 cut(s) 44, 578
AlwI GGATC 2 cut(s) 617, 653
Ama87I CYCGRG 1 cut(s) 47
AoxI GGCC 2 cut(s) 443, 700
ApeKI GCWGC 3 cut(s) 860, 905, 908
ApoI RAATTY 4 cut(s) 241, 428, 835, 1029
AseI ATTAAT 1 cut(s) 126
Asp700I GAANNNNTTC 1 cut(s) 744
AspLEI GCGC 1 cut(s) 393
AspS9I GGNCC 1 cut(s) 322
AsuC2I CCSGG 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 407
AsuNHI GCTAGC 1 cut(s) 191
AvaI CYCGRG 1 cut(s) 47
AvaII GGWCC 1 cut(s) 322
BaeGI GKGCMC 1 cut(s) 561
BanII GRGCYC 1 cut(s) 1017
BarI GAAGNNNNNNTAC 2 cut(s) 687, 719
BbsI GAAGAC 1 cut(s) 303
BbvI GCAGC 3 cut(s) 847, 917, 920
BccI CCATC 1 cut(s) 713
BciT130I CCWGG 1 cut(s) 884
BclI TGATCA 1 cut(s) 528
BcnI CCSGG 1 cut(s) 81
BcoDI GTCTC 2 cut(s) 44, 578
BcuI ACTAGT 1 cut(s) 757
BfaI CTAG 5 cut(s) 18, 192, 351, 422, 758
BfmI CTRYAG 2 cut(s) 337, 903
BisI GCNGC 3 cut(s) 861, 906, 909
BlpI GCTNAGC 1 cut(s) 89
BlsI GCNGC 3 cut(s) 862, 907, 910
Bme1390I CCNGG 2 cut(s) 81, 884
Bme18I GGWCC 1 cut(s) 322
BmeT110I CYCGRG 1 cut(s) 47
BmgT120I GGNCC 1 cut(s) 322
BmiI GGNNCC 2 cut(s) 324, 741
BmrFI CCNGG 2 cut(s) 81, 884
BmsI GCATC 1 cut(s) 385
BmtI GCTAGC 1 cut(s) 195
BpiI GAAGAC 1 cut(s) 303
BpmI CTGGAG 1 cut(s) 276
Bpu1102I GCTNAGC 1 cut(s) 89
BpuEI CTTGAG 2 cut(s) 206, 1031
BpuMI CCSGG 1 cut(s) 81
BsaJI CCNNGG 4 cut(s) 80, 226, 258, 882
BsaWI WCCGGW 1 cut(s) 356
Bsc4I CCNNNNNNNGG 1 cut(s) 498
Bse1I ACTGG 1 cut(s) 119
Bse3DI GCAATG 1 cut(s) 870
BseBI CCWGG 1 cut(s) 884
BseDI CCNNGG 4 cut(s) 80, 226, 258, 882
BseGI GGATG 3 cut(s) 268, 697, 724
BseLI CCNNNNNNNGG 1 cut(s) 498
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 2 cut(s) 309, 609
BseNI ACTGG 1 cut(s) 119
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 3 cut(s) 847, 917, 920
Bsh1236I CGCG 1 cut(s) 393
BshFI GGCC 2 cut(s) 445, 702
BsiHKCI CYCGRG 1 cut(s) 47
BsiSI CCGG 2 cut(s) 80, 357
BslI CCNNNNNNNGG 1 cut(s) 498
BsmAI GTCTC 2 cut(s) 44, 578
BsnI GGCC 2 cut(s) 445, 702
BsoBI CYCGRG 1 cut(s) 47
Bsp1286I GDGCHC 2 cut(s) 561, 1017
Bsp1407I TGTACA 1 cut(s) 694
Bsp143I GATC 5 cut(s) 157, 528, 622, 658, 786
Bsp1720I GCTNAGC 1 cut(s) 89
Bsp19I CCATGG 2 cut(s) 226, 258
BspACI CCGC 2 cut(s) 455, 749
BspANI GGCC 2 cut(s) 445, 702
BspCNI CTCAG 2 cut(s) 310, 608
BspFNI CGCG 1 cut(s) 393
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 2 cut(s) 324, 741
BspMAI CTGCAG 2 cut(s) 341, 907
BspOI GCTAGC 1 cut(s) 195
BspPI GGATC 2 cut(s) 617, 653
BsrDI GCAATG 1 cut(s) 870
BsrGI TGTACA 1 cut(s) 694
BsrI ACTGG 1 cut(s) 119
BssECI CCNNGG 4 cut(s) 80, 226, 258, 882
BssMI GATC 5 cut(s) 157, 528, 622, 658, 786
BssT1I CCWWGG 2 cut(s) 226, 258
Bst2UI CCWGG 1 cut(s) 884
Bst4CI ACNGT 1 cut(s) 656
Bst6I CTCTTC 2 cut(s) 102, 750
BstAUI TGTACA 1 cut(s) 694
BstC8I GCNNGC 4 cut(s) 193, 307, 341, 903
BstDEI CTNAG 4 cut(s) 89, 318, 575, 595
BstDSI CCRYGG 2 cut(s) 226, 258
BstF5I GGATG 3 cut(s) 268, 697, 724
BstFNI CGCG 1 cut(s) 393
BstHHI GCGC 1 cut(s) 393
BstKTI GATC 5 cut(s) 160, 531, 625, 661, 789
BstMAI GTCTC 2 cut(s) 44, 578
BstMBI GATC 5 cut(s) 157, 528, 622, 658, 786
BstNI CCWGG 1 cut(s) 884
BstNSI RCATGY 1 cut(s) 476
BstSCI CCNGG 2 cut(s) 79, 882
BstSFI CTRYAG 2 cut(s) 337, 903
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 3 cut(s) 847, 917, 920
BstV2I GAAGAC 1 cut(s) 303
BstX2I RGATCY 1 cut(s) 622
BstYI RGATCY 1 cut(s) 622
BsuRI GGCC 2 cut(s) 445, 702
BtgI CCRYGG 2 cut(s) 226, 258
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 3 cut(s) 268, 697, 724
BtsI GCAGTG 1 cut(s) 834
BtsIMutI CAGTG 5 cut(s) 126, 538, 571, 652, 834
Cac8I GCNNGC 4 cut(s) 193, 307, 341, 903
CciI TCATGA 1 cut(s) 154
CfoI GCGC 1 cut(s) 393
Cfr13I GGNCC 1 cut(s) 322
Csp6I GTAC 3 cut(s) 25, 695, 1007
CviAII CATG 6 cut(s) 155, 227, 251, 259, 473, 698
CviQI GTAC 3 cut(s) 25, 695, 1007
DdeI CTNAG 4 cut(s) 89, 318, 575, 595
DpnI GATC 5 cut(s) 159, 530, 624, 660, 788
DpnII GATC 5 cut(s) 157, 528, 622, 658, 786
DraI TTTAAA 1 cut(s) 1021
DrdI GACNNNNNNGTC 1 cut(s) 411
DseDI GACNNNNNNGTC 1 cut(s) 411
Eam1104I CTCTTC 2 cut(s) 102, 750
EarI CTCTTC 2 cut(s) 102, 750
Eco130I CCWWGG 2 cut(s) 226, 258
Eco24I GRGCYC 1 cut(s) 1017
Eco47I GGWCC 1 cut(s) 322
Eco57I CTGAAG 3 cut(s) 547, 689, 827
Eco88I CYCGRG 1 cut(s) 47
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 882
EcoT14I CCWWGG 2 cut(s) 226, 258
EcoT38I GRGCYC 1 cut(s) 1017
ErhI CCWWGG 2 cut(s) 226, 258
FaeI CATG 6 cut(s) 158, 230, 254, 262, 476, 701
FalI AAGNNNNNCTT 6 cut(s) 293, 325, 951, 983, 993, 1025
FatI CATG 6 cut(s) 154, 226, 250, 258, 472, 697
FbaI TGATCA 1 cut(s) 528
Fnu4HI GCNGC 3 cut(s) 861, 906, 909
FokI GGATG 3 cut(s) 275, 704, 731
FriOI GRGCYC 1 cut(s) 1017
Fsp4HI GCNGC 3 cut(s) 861, 906, 909
FspBI CTAG 5 cut(s) 18, 192, 351, 422, 758
GlaI GCGC 1 cut(s) 392
GluI GCNGC 3 cut(s) 861, 906, 909
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 2 cut(s) 445, 702
HapII CCGG 2 cut(s) 80, 357
HhaI GCGC 1 cut(s) 393
Hin1II CATG 6 cut(s) 158, 230, 254, 262, 476, 701
Hin6I GCGC 1 cut(s) 391
HinP1I GCGC 1 cut(s) 391
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HindIII AAGCTT 3 cut(s) 8, 86, 307
HinfI GANTC 1 cut(s) 586
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 2 cut(s) 80, 357
HphI GGTGA 1 cut(s) 407
Hpy166II GTNNAC 1 cut(s) 766
Hpy188I TCNGA 5 cut(s) 109, 238, 319, 404, 852
Hpy188III TCNNGA 5 cut(s) 155, 293, 422, 467, 620
Hpy8I GTNNAC 1 cut(s) 766
HpyAV CCTTC 5 cut(s) 111, 143, 530, 713, 888
HpyCH4III ACNGT 1 cut(s) 656
HpyCH4V TGCA 7 cut(s) 74, 250, 339, 863, 875, 905, 923
HpyF3I CTNAG 4 cut(s) 89, 318, 575, 595
Hsp92II CATG 6 cut(s) 158, 230, 254, 262, 476, 701
HspAI GCGC 1 cut(s) 391
Ksp22I TGATCA 1 cut(s) 528
KspAI GTTAAC 1 cut(s) 766
Kzo9I GATC 5 cut(s) 157, 528, 622, 658, 786
LmnI GCTCC 1 cut(s) 143
Lsp1109I GCAGC 3 cut(s) 847, 917, 920
LweI GCATC 1 cut(s) 385
MaeI CTAG 5 cut(s) 18, 192, 351, 422, 758
MaeIII GTNAC 3 cut(s) 413, 780, 829
MalI GATC 5 cut(s) 159, 530, 624, 660, 788
MboI GATC 5 cut(s) 157, 528, 622, 658, 786
MboII GAAGA 4 cut(s) 89, 304, 308, 737
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 2 cut(s) 561, 1017
MluCI AATT 7 cut(s) 241, 361, 428, 601, 675, 835, 1029
MlyI GAGTC 1 cut(s) 580
MmeI TCCRAC 2 cut(s) 427, 996
MroXI GAANNNNTTC 1 cut(s) 744
MseI TTAA 6 cut(s) 126, 459, 600, 714, 765, 1020
MslI CAYNNNNRTG 4 cut(s) 119, 263, 494, 564
MspI CCGG 2 cut(s) 80, 357
MspR9I CCNGG 2 cut(s) 81, 884
MvaI CCWGG 1 cut(s) 884
MvnI CGCG 1 cut(s) 393
NciI CCSGG 1 cut(s) 81
NcoI CCATGG 2 cut(s) 226, 258
NdeII GATC 5 cut(s) 157, 528, 622, 658, 786
NheI GCTAGC 1 cut(s) 191
NlaIII CATG 6 cut(s) 158, 230, 254, 262, 476, 701
NlaIV GGNNCC 2 cut(s) 324, 741
NmuCI GTSAC 2 cut(s) 413, 829
NspI RCATGY 1 cut(s) 476
OliI CACNNNNGTG 2 cut(s) 494, 564
PagI TCATGA 1 cut(s) 154
PdmI GAANNNNTTC 1 cut(s) 744
PkrI GCNGC 3 cut(s) 862, 907, 910
PleI GAGTC 1 cut(s) 580
PpsI GAGTC 1 cut(s) 580
PpuMI RGGWCCY 1 cut(s) 322
PshBI ATTAAT 1 cut(s) 126
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 1 cut(s) 882
PspGI CCWGG 1 cut(s) 882
PspN4I GGNNCC 2 cut(s) 324, 741
PspPI GGNCC 1 cut(s) 322
PspPPI RGGWCCY 1 cut(s) 322
PstI CTGCAG 2 cut(s) 341, 907
PsuI RGATCY 1 cut(s) 622
RsaI GTAC 3 cut(s) 26, 696, 1008
RsaNI GTAC 3 cut(s) 25, 695, 1007
RseI CAYNNNNRTG 4 cut(s) 119, 263, 494, 564
SaqAI TTAA 6 cut(s) 126, 459, 600, 714, 765, 1020
SatI GCNGC 3 cut(s) 861, 906, 909
Sau3AI GATC 5 cut(s) 157, 528, 622, 658, 786
Sau96I GGNCC 1 cut(s) 322
SchI GAGTC 1 cut(s) 580
ScrFI CCNGG 2 cut(s) 81, 884
SduI GDGCHC 2 cut(s) 561, 1017
SfaNI GCATC 1 cut(s) 385
SfcI CTRYAG 2 cut(s) 337, 903
SinI GGWCC 1 cut(s) 322
SmiMI CAYNNNNRTG 4 cut(s) 119, 263, 494, 564
SmlI CTYRAG 2 cut(s) 185, 1010
SmoI CTYRAG 2 cut(s) 185, 1010
SpeI ACTAGT 1 cut(s) 757
Sse9I AATT 7 cut(s) 241, 361, 428, 601, 675, 835, 1029
SsiI CCGC 2 cut(s) 455, 749
SspMI CTAG 5 cut(s) 18, 192, 351, 422, 758
StyD4I CCNGG 2 cut(s) 79, 882
StyI CCWWGG 2 cut(s) 226, 258
TaaI ACNGT 1 cut(s) 656
TaqI TCGA 3 cut(s) 160, 466, 823
TasI AATT 7 cut(s) 241, 361, 428, 601, 675, 835, 1029
TatI WGTACW 2 cut(s) 694, 1006
Tru1I TTAA 6 cut(s) 126, 459, 600, 714, 765, 1020
Tru9I TTAA 6 cut(s) 126, 459, 600, 714, 765, 1020
TscAI CASTG 5 cut(s) 126, 538, 571, 659, 834
TseFI GTSAC 2 cut(s) 413, 829
TseI GCWGC 3 cut(s) 860, 905, 908
Tsp45I GTSAC 2 cut(s) 413, 829
TspDTI ATGAA 6 cut(s) 93, 371, 421, 585, 859, 998
TspRI CASTG 5 cut(s) 126, 538, 571, 659, 834
VpaK11BI GGWCC 1 cut(s) 322
VspI ATTAAT 1 cut(s) 126
XapI RAATTY 4 cut(s) 241, 428, 835, 1029
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 1 cut(s) 476
XmnI GAANNNNTTC 1 cut(s) 744
XspI CTAG 5 cut(s) 18, 192, 351, 422, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.