Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_retrovirus | PF25597 | 61 - 116 | 1.8e-24 | Retroviral polymerase SH3-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 62 |
| AclWI | GGATC | 1 cut(s) | 287 |
| AcoI | YGGCCR | 1 cut(s) | 53 |
| AcsI | RAATTY | 2 cut(s) | 47, 143 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AflIII | ACRYGT | 1 cut(s) | 190 |
| AgeI | ACCGGT | 1 cut(s) | 90 |
| AgsI | TTSAA | 2 cut(s) | 303, 338 |
| AjiI | CACGTC | 1 cut(s) | 328 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 242 |
| AlwI | GGATC | 1 cut(s) | 287 |
| AoxI | GGCC | 1 cut(s) | 53 |
| ApoI | RAATTY | 2 cut(s) | 47, 143 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 317, 349 |
| AsiGI | ACCGGT | 1 cut(s) | 90 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 1 cut(s) | 322 |
| BalI | TGGCCA | 1 cut(s) | 55 |
| BcoDI | GTCTC | 1 cut(s) | 242 |
| BfmI | CTRYAG | 1 cut(s) | 280 |
| BmgBI | CACGTC | 1 cut(s) | 328 |
| BmsI | GCATC | 1 cut(s) | 21 |
| BoxI | GACNNNNGTC | 1 cut(s) | 234 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| BpuEI | CTTGAG | 1 cut(s) | 280 |
| BsaWI | WCCGGW | 1 cut(s) | 90 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 122, 152 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse118I | RCCGGY | 1 cut(s) | 90 |
| Bse1I | ACTGG | 1 cut(s) | 241 |
| BseGI | GGATG | 1 cut(s) | 198 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMII | CTCAG | 1 cut(s) | 18 |
| BseNI | ACTGG | 1 cut(s) | 241 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BshFI | GGCC | 1 cut(s) | 55 |
| BshTI | ACCGGT | 1 cut(s) | 90 |
| BsiSI | CCGG | 1 cut(s) | 91 |
| BslFI | GGGAC | 1 cut(s) | 338 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsmAI | GTCTC | 1 cut(s) | 242 |
| BsmFI | GGGAC | 1 cut(s) | 338 |
| BsnI | GGCC | 1 cut(s) | 55 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| BspACI | CCGC | 1 cut(s) | 62 |
| BspANI | GGCC | 1 cut(s) | 55 |
| BspCNI | CTCAG | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 287 |
| BsrFI | RCCGGY | 1 cut(s) | 90 |
| BsrI | ACTGG | 1 cut(s) | 241 |
| BssAI | RCCGGY | 1 cut(s) | 90 |
| BssMI | GATC | 1 cut(s) | 292 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| Bst6I | CTCTTC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 1 cut(s) | 27 |
| BstF5I | GGATG | 1 cut(s) | 198 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMAI | GTCTC | 1 cut(s) | 242 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstNSI | RCATGY | 1 cut(s) | 194 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 234 |
| BstSFI | CTRYAG | 1 cut(s) | 280 |
| BsuRI | GGCC | 1 cut(s) | 55 |
| BtgZI | GCGATG | 1 cut(s) | 28 |
| BtrI | CACGTC | 1 cut(s) | 328 |
| BtsCI | GGATG | 1 cut(s) | 198 |
| BtsI | GCAGTG | 1 cut(s) | 114 |
| BtsIMutI | CAGTG | 3 cut(s) | 114, 162, 248 |
| Cfr10I | RCCGGY | 1 cut(s) | 90 |
| CspAI | ACCGGT | 1 cut(s) | 90 |
| CviAII | CATG | 3 cut(s) | 7, 135, 191 |
| CviJI | RGCY | 5 cut(s) | 55, 180, 223, 258, 278 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 180, 223, 258, 278 |
| DdeI | CTNAG | 1 cut(s) | 27 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| DraI | TTTAAA | 1 cut(s) | 148 |
| EaeI | YGGCCR | 1 cut(s) | 53 |
| Eam1104I | CTCTTC | 1 cut(s) | 333 |
| EarI | CTCTTC | 1 cut(s) | 333 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| EcoRI | GAATTC | 1 cut(s) | 47 |
| FaeI | CATG | 3 cut(s) | 10, 138, 194 |
| FaiI | YATR | 6 cut(s) | 8, 20, 136, 192, 282, 291 |
| FaqI | GGGAC | 1 cut(s) | 338 |
| FatI | CATG | 3 cut(s) | 6, 134, 190 |
| FokI | GGATG | 1 cut(s) | 185 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 1 cut(s) | 55 |
| HapII | CCGG | 1 cut(s) | 91 |
| Hin1II | CATG | 3 cut(s) | 10, 138, 194 |
| HincII | GTYRAC | 1 cut(s) | 24 |
| HindII | GTYRAC | 1 cut(s) | 24 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 2 cut(s) | 235, 269 |
| HpaII | CCGG | 1 cut(s) | 91 |
| HphI | GGTGA | 1 cut(s) | 322 |
| Hpy166II | GTNNAC | 4 cut(s) | 24, 79, 160, 196 |
| Hpy188I | TCNGA | 1 cut(s) | 188 |
| Hpy8I | GTNNAC | 4 cut(s) | 24, 79, 160, 196 |
| HpyAV | CCTTC | 3 cut(s) | 106, 162, 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyCH4IV | ACGT | 1 cut(s) | 327 |
| HpyCH4V | TGCA | 1 cut(s) | 107 |
| HpyF3I | CTNAG | 1 cut(s) | 27 |
| HpySE526I | ACGT | 1 cut(s) | 327 |
| Hsp92II | CATG | 3 cut(s) | 10, 138, 194 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LpnPI | CCDG | 8 cut(s) | 37, 69, 104, 138, 154, 254, 307, 309 |
| LweI | GCATC | 1 cut(s) | 21 |
| MaeII | ACGT | 1 cut(s) | 327 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MboII | GAAGA | 1 cut(s) | 350 |
| MlsI | TGGCCA | 1 cut(s) | 55 |
| MluCI | AATT | 3 cut(s) | 47, 67, 143 |
| MluNI | TGGCCA | 1 cut(s) | 55 |
| MlyI | GAGTC | 1 cut(s) | 244 |
| MnlI | CCTC | 3 cut(s) | 121, 124, 259 |
| Mox20I | TGGCCA | 1 cut(s) | 55 |
| MroXI | GAANNNNTTC | 1 cut(s) | 164 |
| MscI | TGGCCA | 1 cut(s) | 55 |
| MseI | TTAA | 2 cut(s) | 66, 147 |
| Msp20I | TGGCCA | 1 cut(s) | 55 |
| MspI | CCGG | 1 cut(s) | 91 |
| NdeII | GATC | 1 cut(s) | 292 |
| NlaIII | CATG | 3 cut(s) | 10, 138, 194 |
| NspI | RCATGY | 1 cut(s) | 194 |
| PciI | ACATGT | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 1 cut(s) | 164 |
| PfeI | GAWTC | 1 cut(s) | 269 |
| PinAI | ACCGGT | 1 cut(s) | 90 |
| PleI | GAGTC | 1 cut(s) | 243 |
| PpsI | GAGTC | 1 cut(s) | 243 |
| PscI | ACATGT | 1 cut(s) | 190 |
| PshAI | GACNNNNGTC | 1 cut(s) | 234 |
| SaqAI | TTAA | 2 cut(s) | 66, 147 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 244 |
| SetI | ASST | 4 cut(s) | 154, 225, 312, 330 |
| SfaNI | GCATC | 1 cut(s) | 21 |
| SfcI | CTRYAG | 1 cut(s) | 280 |
| SmlI | CTYRAG | 1 cut(s) | 259 |
| SmoI | CTYRAG | 1 cut(s) | 259 |
| Sse9I | AATT | 3 cut(s) | 47, 67, 143 |
| SsiI | CCGC | 1 cut(s) | 62 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TaiI | ACGT | 1 cut(s) | 330 |
| TasI | AATT | 3 cut(s) | 47, 67, 143 |
| TfiI | GAWTC | 1 cut(s) | 269 |
| Tru1I | TTAA | 2 cut(s) | 66, 147 |
| Tru9I | TTAA | 2 cut(s) | 66, 147 |
| TscAI | CASTG | 3 cut(s) | 114, 162, 248 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 3 cut(s) | 114, 162, 248 |
| XapI | RAATTY | 2 cut(s) | 47, 143 |
| XceI | RCATGY | 1 cut(s) | 194 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 132 |
| XmnI | GAANNNNTTC | 1 cut(s) | 164 |