FvH4_5g24301

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000106
Physical Location & Seq
Reverse (-)
15657643 .. 15659845
2203 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g24301.t1

Sequence Viewer

Length: 900 bp
ATGCAATGGAGCCAATCCATGGCCATGGCATTGCAGATCAAAAACATGATCGGCTTCATCAATGGGACCTCACAACGTCCTACAGAAGACCAGGCAGATGAGCGGCAACAATGGGACAGATGTGACATTCTTGTCAAAACTTGGCTTGGAGCATCTATGTCGAATCCTATTGCCAAGAGTGTCATGCACTGCAAAAGCGCTCGAGCAGTTTGGCTTGAGTTGCAAGAAAGGTTCATGCAGTCTAACACCGTCCAGTTATTCAACATAGAGAATGAGATTCACGGATGTGAACAAGGTACTGATTCTGTGACTACCTTTTTCACTAAACTCAAGGCACTATGGGATGAGCGAGATGCCTTTTGTGATCTAAGTCCCTGTGCATGTGAGGAAGGTGGCAAGCTAAGTGAGTATGTGAAAAATCAGAAAACAATGAAGTTTCTCATGGGATTGAATGAGAATTATGCGCAAATGCGTGGCACCATTGTTGCTATTAAGCCTCTCCTGGCTGTCAACAAAGCCTACTCGATGGTTCTTCGTCACGAGAAACAGGCTGAGGCAGCCATGGGAAGCAAACAAGGCGTGCAACAACAAGAAGCTGCAGCCTTTGCCGTGAGAGGCAGTGATCGAGACAATAGCCGAGACAACGGCAGATCCAATAGCCGTGCCGAGAGTGCCGAAGGCAGCAAGCCAAAATGTGAAAAGTGCAATAAGAGTCACCTTACCGAGAATTGCCGCCAACATCTAAAGTGCACGTTTTGCGGTTGGAAGGGTCACACCTATGACACTTGCCGAAGAAGAAAGGCCATAGCAGATCGAAACTCCAGGAGTAACCATGTTGCTTCGATGTTTAAAGATGGAAACTCGGTCAACTTCCCTTTCTCAAAGGAAGAATGCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2

Protein Analysis

300

Amino Acids

33.87

Weight (kDa)

8.83

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 2 - 27 2.6e-07 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 7 - 111 2e-07 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
Acc16I TGCGCA 1 cut(s) 465
AccB1I GGYRCC 1 cut(s) 476
AccB7I CCANNNNNTGG 1 cut(s) 19
AccBSI CCGCTC 1 cut(s) 103
AciI CCGC 3 cut(s) 103, 733, 759
AclWI GGATC 1 cut(s) 645
AcoI YGGCCR 1 cut(s) 21
AfaI GTAC 1 cut(s) 298
AfeI AGCGCT 1 cut(s) 199
AfiI CCNNNNNNNGG 1 cut(s) 19
AgsI TTSAA 2 cut(s) 262, 451
AjnI CCWGG 3 cut(s) 90, 501, 821
AleI CACNNNNGTG 1 cut(s) 285
AluBI AGCT 2 cut(s) 400, 596
AluI AGCT 2 cut(s) 400, 596
Alw21I GWGCWC 1 cut(s) 752
Alw26I GTCTC 2 cut(s) 621, 633
Alw44I GTGCAC 1 cut(s) 748
AlwI GGATC 1 cut(s) 645
Ama87I CYCGRG 1 cut(s) 201
Aor51HI AGCGCT 1 cut(s) 199
AoxI GGCC 2 cut(s) 21, 801
ApaLI GTGCAC 1 cut(s) 748
ApeKI GCWGC 4 cut(s) 557, 596, 599, 681
AspLEI GCGC 2 cut(s) 200, 466
AspS9I GGNCC 1 cut(s) 66
AsuHPI GGTGA 1 cut(s) 707
AvaI CYCGRG 1 cut(s) 201
AvaII GGWCC 1 cut(s) 66
BaeGI GKGCMC 1 cut(s) 752
BalI TGGCCA 1 cut(s) 23
BanI GGYRCC 1 cut(s) 476
BauI CACGAG 1 cut(s) 539
BbsI GAAGAC 1 cut(s) 93
Bbv12I GWGCWC 1 cut(s) 752
BbvCI CCTCAGC 1 cut(s) 552
BbvI GCAGC 4 cut(s) 569, 583, 611, 693
BccI CCATC 2 cut(s) 520, 848
BceAI ACGGC 3 cut(s) 593, 645, 661
BcgI CGANNNNNNTGC 2 cut(s) 141, 175
BciT130I CCWGG 3 cut(s) 92, 503, 823
BcoDI GTCTC 2 cut(s) 621, 633
BfmI CTRYAG 2 cut(s) 81, 597
BfoI RGCGCY 1 cut(s) 201
BisI GCNGC 6 cut(s) 104, 558, 597, 600, 682, 733
BlsI GCNGC 6 cut(s) 105, 559, 598, 601, 683, 734
Bme1390I CCNGG 3 cut(s) 92, 503, 823
Bme18I GGWCC 1 cut(s) 66
BmeT110I CYCGRG 1 cut(s) 201
BmgT120I GGNCC 1 cut(s) 66
BmiI GGNNCC 3 cut(s) 11, 67, 478
BmrFI CCNGG 3 cut(s) 92, 503, 823
BmsI GCATC 2 cut(s) 161, 343
BpiI GAAGAC 1 cut(s) 93
BpmI CTGGAG 1 cut(s) 805
Bpu10I CCTNAGC 1 cut(s) 552
BpuEI CTTGAG 2 cut(s) 236, 314
BsaJI CCNNGG 3 cut(s) 18, 24, 561
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 253
Bse3DI GCAATG 2 cut(s) 11, 29
BseBI CCWGG 3 cut(s) 92, 503, 823
BseDI CCNNGG 3 cut(s) 18, 24, 561
BseGI GGATG 2 cut(s) 290, 349
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 2 cut(s) 11, 29
BseMII CTCAG 1 cut(s) 543
BseNI ACTGG 1 cut(s) 253
BseSI GKGCMC 1 cut(s) 752
BseXI GCAGC 4 cut(s) 569, 583, 611, 693
BshFI GGCC 2 cut(s) 23, 803
BshNI GGYRCC 1 cut(s) 476
BsiHKAI GWGCWC 1 cut(s) 752
BsiHKCI CYCGRG 1 cut(s) 201
BslFI GGGAC 3 cut(s) 79, 128, 357
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 2 cut(s) 621, 633
BsmFI GGGAC 3 cut(s) 79, 128, 357
BsmI GAATGC 1 cut(s) 896
BsnI GGCC 2 cut(s) 23, 803
BsoBI CYCGRG 1 cut(s) 201
Bsp1286I GDGCHC 1 cut(s) 752
Bsp143I GATC 6 cut(s) 36, 48, 364, 622, 650, 811
Bsp19I CCATGG 3 cut(s) 18, 24, 561
BspACI CCGC 3 cut(s) 103, 733, 759
BspANI GGCC 2 cut(s) 23, 803
BspCNI CTCAG 1 cut(s) 544
BspLI GGNNCC 3 cut(s) 11, 67, 478
BspMAI CTGCAG 1 cut(s) 601
BspPI GGATC 1 cut(s) 645
BspT107I GGYRCC 1 cut(s) 476
BsrBI CCGCTC 1 cut(s) 103
BsrDI GCAATG 2 cut(s) 11, 29
BsrI ACTGG 1 cut(s) 253
BssECI CCNNGG 3 cut(s) 18, 24, 561
BssMI GATC 6 cut(s) 36, 48, 364, 622, 650, 811
BssSI CACGAG 1 cut(s) 539
BssT1I CCWWGG 3 cut(s) 18, 24, 561
Bst2BI CACGAG 1 cut(s) 539
Bst2UI CCWGG 3 cut(s) 92, 503, 823
Bst4CI ACNGT 1 cut(s) 250
BstAPI GCANNNNNTGC 2 cut(s) 605, 756
BstC8I GCNNGC 3 cut(s) 398, 581, 686
BstDEI CTNAG 3 cut(s) 368, 401, 552
BstDSI CCRYGG 3 cut(s) 18, 24, 561
BstF5I GGATG 2 cut(s) 290, 349
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 2 cut(s) 200, 466
BstKTI GATC 6 cut(s) 39, 51, 367, 625, 653, 814
BstMAI GTCTC 2 cut(s) 621, 633
BstMBI GATC 6 cut(s) 36, 48, 364, 622, 650, 811
BstMWI GCNNNNNNNGC 6 cut(s) 220, 557, 576, 605, 671, 756
BstNI CCWGG 3 cut(s) 92, 503, 823
BstNSI RCATGY 1 cut(s) 384
BstSCI CCNGG 3 cut(s) 90, 501, 821
BstSFI CTRYAG 2 cut(s) 81, 597
BstSLI GKGCMC 1 cut(s) 752
BstV1I GCAGC 4 cut(s) 569, 583, 611, 693
BstV2I GAAGAC 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 650
BstXI CCANNNNNNTGG 1 cut(s) 25
BstYI RGATCY 1 cut(s) 650
BsuRI GGCC 2 cut(s) 23, 803
BtgI CCRYGG 3 cut(s) 18, 24, 561
BtsCI GGATG 2 cut(s) 290, 349
BtsI GCAGTG 2 cut(s) 187, 625
BtsIMutI CAGTG 2 cut(s) 187, 625
Cac8I GCNNGC 3 cut(s) 398, 581, 686
CfoI GCGC 2 cut(s) 200, 466
Cfr13I GGNCC 1 cut(s) 66
Csp6I GTAC 1 cut(s) 297
CviAII CATG 9 cut(s) 19, 25, 46, 184, 235, 381, 442, 562, 833
CviQI GTAC 1 cut(s) 297
DdeI CTNAG 3 cut(s) 368, 401, 552
DpnI GATC 6 cut(s) 38, 50, 366, 624, 652, 813
DpnII GATC 6 cut(s) 36, 48, 364, 622, 650, 811
DraI TTTAAA 1 cut(s) 850
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 21
Eco130I CCWWGG 3 cut(s) 18, 24, 561
Eco47I GGWCC 1 cut(s) 66
Eco47III AGCGCT 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 201
EcoO109I RGGNCCY 1 cut(s) 66
EcoRII CCWGG 3 cut(s) 90, 501, 821
EcoT14I CCWWGG 3 cut(s) 18, 24, 561
ErhI CCWWGG 3 cut(s) 18, 24, 561
FaeI CATG 9 cut(s) 22, 28, 49, 187, 238, 384, 445, 565, 836
FaqI GGGAC 3 cut(s) 79, 128, 357
FatI CATG 9 cut(s) 18, 24, 45, 183, 234, 380, 441, 561, 832
Fnu4HI GCNGC 6 cut(s) 104, 558, 597, 600, 682, 733
FokI GGATG 2 cut(s) 297, 356
Fsp4HI GCNGC 6 cut(s) 104, 558, 597, 600, 682, 733
FspI TGCGCA 1 cut(s) 465
GlaI GCGC 2 cut(s) 199, 465
GluI GCNGC 6 cut(s) 104, 558, 597, 600, 682, 733
GsuI CTGGAG 1 cut(s) 805
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 2 cut(s) 23, 803
HhaI GCGC 2 cut(s) 200, 466
Hin1II CATG 9 cut(s) 22, 28, 49, 187, 238, 384, 445, 565, 836
Hin6I GCGC 2 cut(s) 198, 464
HinP1I GCGC 2 cut(s) 198, 464
HincII GTYRAC 2 cut(s) 511, 868
HindII GTYRAC 2 cut(s) 511, 868
HinfI GANTC 4 cut(s) 163, 277, 302, 712
HphI GGTGA 1 cut(s) 707
Hpy166II GTNNAC 4 cut(s) 290, 511, 750, 868
Hpy188I TCNGA 1 cut(s) 423
Hpy188III TCNNGA 2 cut(s) 539, 626
Hpy8I GTNNAC 4 cut(s) 290, 511, 750, 868
HpyAV CCTTC 3 cut(s) 383, 671, 760
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4IV ACGT 2 cut(s) 76, 752
HpyF10VI GCNNNNNNNGC 6 cut(s) 220, 557, 576, 605, 671, 756
HpyF3I CTNAG 3 cut(s) 368, 401, 552
HpySE526I ACGT 2 cut(s) 76, 752
Hsp92II CATG 9 cut(s) 22, 28, 49, 187, 238, 384, 445, 565, 836
HspAI GCGC 2 cut(s) 198, 464
Kzo9I GATC 6 cut(s) 36, 48, 364, 622, 650, 811
LmnI GCTCC 2 cut(s) 9, 149
LpnPI CCDG 9 cut(s) 77, 104, 266, 388, 488, 515, 533, 808, 835
Lsp1109I GCAGC 4 cut(s) 569, 583, 611, 693
LweI GCATC 2 cut(s) 161, 343
MaeII ACGT 2 cut(s) 76, 752
MaeIII GTNAC 6 cut(s) 122, 307, 536, 713, 770, 827
MalI GATC 6 cut(s) 38, 50, 366, 624, 652, 813
MbiI CCGCTC 1 cut(s) 103
MboI GATC 6 cut(s) 36, 48, 364, 622, 650, 811
MboII GAAGA 5 cut(s) 98, 524, 804, 807, 899
MflI RGATCY 1 cut(s) 650
MhlI GDGCHC 1 cut(s) 752
MlsI TGGCCA 1 cut(s) 23
MluCI AATT 2 cut(s) 457, 727
MluNI TGGCCA 1 cut(s) 23
MlyI GAGTC 1 cut(s) 721
MmeI TCCRAC 1 cut(s) 743
MnlI CCTC 5 cut(s) 79, 379, 507, 547, 608
Mox20I TGGCCA 1 cut(s) 23
MscI TGGCCA 1 cut(s) 23
MseI TTAA 2 cut(s) 492, 849
MslI CAYNNNNRTG 3 cut(s) 23, 285, 777
Msp20I TGGCCA 1 cut(s) 23
MspR9I CCNGG 3 cut(s) 92, 503, 823
Mva1269I GAATGC 1 cut(s) 896
MvaI CCWGG 3 cut(s) 92, 503, 823
MwoI GCNNNNNNNGC 6 cut(s) 220, 557, 576, 605, 671, 756
NcoI CCATGG 3 cut(s) 18, 24, 561
NdeII GATC 6 cut(s) 36, 48, 364, 622, 650, 811
NlaIII CATG 9 cut(s) 22, 28, 49, 187, 238, 384, 445, 565, 836
NlaIV GGNNCC 3 cut(s) 11, 67, 478
NmeAIII GCCGAG 2 cut(s) 662, 691
NmuCI GTSAC 5 cut(s) 122, 307, 536, 713, 770
NsbI TGCGCA 1 cut(s) 465
NspI RCATGY 1 cut(s) 384
OliI CACNNNNGTG 1 cut(s) 285
PaeR7I CTCGAG 1 cut(s) 201
PctI GAATGC 1 cut(s) 896
PfeI GAWTC 3 cut(s) 163, 277, 302
PflMI CCANNNNNTGG 1 cut(s) 19
PfoI TCCNGGA 1 cut(s) 821
PkrI GCNGC 6 cut(s) 105, 559, 598, 601, 683, 734
PleI GAGTC 1 cut(s) 720
PpsI GAGTC 1 cut(s) 720
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 3 cut(s) 90, 501, 821
PspGI CCWGG 3 cut(s) 90, 501, 821
PspN4I GGNNCC 3 cut(s) 11, 67, 478
PspPI GGNCC 1 cut(s) 66
PspPPI RGGWCCY 1 cut(s) 66
PspXI VCTCGAGB 1 cut(s) 201
PstI CTGCAG 1 cut(s) 601
PsuI RGATCY 1 cut(s) 650
RsaI GTAC 1 cut(s) 298
RsaNI GTAC 1 cut(s) 297
RseI CAYNNNNRTG 3 cut(s) 23, 285, 777
SaqAI TTAA 2 cut(s) 492, 849
SatI GCNGC 6 cut(s) 104, 558, 597, 600, 682, 733
Sau3AI GATC 6 cut(s) 36, 48, 364, 622, 650, 811
Sau96I GGNCC 1 cut(s) 66
SchI GAGTC 1 cut(s) 721
ScrFI CCNGG 3 cut(s) 92, 503, 823
SduI GDGCHC 1 cut(s) 752
SfaNI GCATC 2 cut(s) 161, 343
SfcI CTRYAG 2 cut(s) 81, 597
Sfr274I CTCGAG 1 cut(s) 201
SinI GGWCC 1 cut(s) 66
SlaI CTCGAG 1 cut(s) 201
SmiMI CAYNNNNRTG 3 cut(s) 23, 285, 777
SmlI CTYRAG 3 cut(s) 201, 215, 329
SmoI CTYRAG 3 cut(s) 201, 215, 329
Sse9I AATT 2 cut(s) 457, 727
SsiI CCGC 3 cut(s) 103, 733, 759
StyD4I CCNGG 3 cut(s) 90, 501, 821
StyI CCWWGG 3 cut(s) 18, 24, 561
TaaI ACNGT 1 cut(s) 250
TaiI ACGT 2 cut(s) 79, 755
TaqI TCGA 6 cut(s) 161, 202, 524, 625, 814, 842
TaqII GACCGA 1 cut(s) 853
TasI AATT 2 cut(s) 457, 727
TauI GCSGC 2 cut(s) 106, 735
TfiI GAWTC 3 cut(s) 163, 277, 302
Tru1I TTAA 2 cut(s) 492, 849
Tru9I TTAA 2 cut(s) 492, 849
TscAI CASTG 2 cut(s) 194, 625
TseFI GTSAC 5 cut(s) 122, 307, 536, 713, 770
TseI GCWGC 4 cut(s) 557, 596, 599, 681
Tsp45I GTSAC 5 cut(s) 122, 307, 536, 713, 770
TspDTI ATGAA 3 cut(s) 46, 223, 446
TspGWI ACGGA 1 cut(s) 297
TspRI CASTG 2 cut(s) 194, 625
Van91I CCANNNNNTGG 1 cut(s) 19
VneI GTGCAC 1 cut(s) 748
VpaK11BI GGWCC 1 cut(s) 66
XceI RCATGY 1 cut(s) 384
XhoI CTCGAG 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.