Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_retrovirus | PF25597 | 61 - 86 | 1.1e-06 | Retroviral polymerase SH3-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 53 |
| AcuI | CTGAAG | 1 cut(s) | 147 |
| AcvI | CACGTG | 1 cut(s) | 199 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AluBI | AGCT | 2 cut(s) | 134, 223 |
| AluI | AGCT | 2 cut(s) | 134, 223 |
| AoxI | GGCC | 1 cut(s) | 53 |
| ApeKI | GCWGC | 1 cut(s) | 141 |
| BalI | TGGCCA | 1 cut(s) | 55 |
| BanII | GRGCYC | 1 cut(s) | 98 |
| BbrPI | CACGTG | 1 cut(s) | 199 |
| BbvI | GCAGC | 1 cut(s) | 153 |
| BccI | CCATC | 1 cut(s) | 160 |
| BclI | TGATCA | 1 cut(s) | 160 |
| BisI | GCNGC | 1 cut(s) | 142 |
| BlsI | GCNGC | 1 cut(s) | 143 |
| BmiI | GGNNCC | 1 cut(s) | 95 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 85, 117 |
| BsaAI | YACGTR | 1 cut(s) | 199 |
| Bse1I | ACTGG | 1 cut(s) | 74 |
| BseNI | ACTGG | 1 cut(s) | 74 |
| BseXI | GCAGC | 1 cut(s) | 153 |
| BshFI | GGCC | 1 cut(s) | 55 |
| BsnI | GGCC | 1 cut(s) | 55 |
| Bsp1286I | GDGCHC | 1 cut(s) | 98 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| BspANI | GGCC | 1 cut(s) | 55 |
| BspLI | GGNNCC | 1 cut(s) | 95 |
| BsrI | ACTGG | 1 cut(s) | 74 |
| BssMI | GATC | 1 cut(s) | 160 |
| BstBAI | YACGTR | 1 cut(s) | 199 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstV1I | GCAGC | 1 cut(s) | 153 |
| BsuRI | GGCC | 1 cut(s) | 55 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 1 cut(s) | 191 |
| CviJI | RGCY | 6 cut(s) | 55, 96, 134, 151, 188, 223 |
| CviKI_1 | RGCY | 6 cut(s) | 55, 96, 134, 151, 188, 223 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 53 |
| Eco24I | GRGCYC | 1 cut(s) | 98 |
| Eco57I | CTGAAG | 1 cut(s) | 147 |
| Eco72I | CACGTG | 1 cut(s) | 199 |
| EcoT38I | GRGCYC | 1 cut(s) | 98 |
| FaeI | CATG | 1 cut(s) | 194 |
| FaiI | YATR | 5 cut(s) | 8, 20, 81, 146, 192 |
| FatI | CATG | 1 cut(s) | 190 |
| FbaI | TGATCA | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 1 cut(s) | 142 |
| FriOI | GRGCYC | 1 cut(s) | 98 |
| Fsp4HI | GCNGC | 1 cut(s) | 142 |
| GluI | GCNGC | 1 cut(s) | 142 |
| HaeIII | GGCC | 1 cut(s) | 55 |
| Hin1II | CATG | 1 cut(s) | 194 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HindIII | AAGCTT | 2 cut(s) | 132, 221 |
| HinfI | GANTC | 1 cut(s) | 88 |
| HpaI | GTTAAC | 1 cut(s) | 67 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 196 |
| Hpy188I | TCNGA | 1 cut(s) | 93 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 196 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4IV | ACGT | 1 cut(s) | 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| HpySE526I | ACGT | 1 cut(s) | 198 |
| Hsp92II | CATG | 1 cut(s) | 194 |
| Ksp22I | TGATCA | 1 cut(s) | 160 |
| KspAI | GTTAAC | 1 cut(s) | 67 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| LmnI | GCTCC | 2 cut(s) | 93, 138 |
| LpnPI | CCDG | 5 cut(s) | 12, 55, 69, 138, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 153 |
| MaeII | ACGT | 1 cut(s) | 198 |
| MaeIII | GTNAC | 1 cut(s) | 118 |
| MalI | GATC | 1 cut(s) | 162 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 1 cut(s) | 140 |
| MhlI | GDGCHC | 1 cut(s) | 98 |
| MlsI | TGGCCA | 1 cut(s) | 55 |
| MluNI | TGGCCA | 1 cut(s) | 55 |
| MnlI | CCTC | 1 cut(s) | 255 |
| Mox20I | TGGCCA | 1 cut(s) | 55 |
| MscI | TGGCCA | 1 cut(s) | 55 |
| MseI | TTAA | 1 cut(s) | 66 |
| MslI | CAYNNNNRTG | 1 cut(s) | 168 |
| Msp20I | TGGCCA | 1 cut(s) | 55 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NdeII | GATC | 1 cut(s) | 160 |
| NlaIII | CATG | 1 cut(s) | 194 |
| NlaIV | GGNNCC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 88 |
| PkrI | GCNGC | 1 cut(s) | 143 |
| PmaCI | CACGTG | 1 cut(s) | 199 |
| PmlI | CACGTG | 1 cut(s) | 199 |
| Ppu21I | YACGTR | 1 cut(s) | 199 |
| PspCI | CACGTG | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 1 cut(s) | 95 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| RseI | CAYNNNNRTG | 1 cut(s) | 168 |
| SaqAI | TTAA | 1 cut(s) | 66 |
| SatI | GCNGC | 1 cut(s) | 142 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| SduI | GDGCHC | 1 cut(s) | 98 |
| SetI | ASST | 6 cut(s) | 48, 118, 136, 201, 225, 266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 168 |
| TaiI | ACGT | 1 cut(s) | 201 |
| TaqI | TCGA | 1 cut(s) | 211 |
| TfiI | GAWTC | 1 cut(s) | 88 |
| Tru1I | TTAA | 1 cut(s) | 66 |
| Tru9I | TTAA | 1 cut(s) | 66 |
| TseI | GCWGC | 1 cut(s) | 141 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 48 |