Rw2G051390
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000106
Physical Location & Seq
Reverse (-)
79099891 .. 79101326
1436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G051390.1

Sequence Viewer

Length: 1140 bp
ATGGCTGGTGAAGACGAAGTCATCTCCTCTGTTTCCGGTGAAAACAGCTCATCTACTGATGAATCTGCCAATCCCTTGTTCCTCCACCATTCAGATCATCCTGGTCTGCTCCTTGTCTCAAAGAAATTGACTGGTGACAATTACAACTCTTGGTGTCGTGCTATGAGAATCTCCTTAAGCGCCAAAAATAAGACCGGTTTTATCACCGGAAAAATCGTGGAACCCTCTGCAACTTTGAAGCCAGATGAGCATGCCCTTTGGCAACGTTGTAATGATATGGTCCTCTCTTGGATTCTCAATTCACTTGAACCGGATCTTGCTGATTCGGTTCTTTCATGCACCACTCCTCATGCCGTTTGGGAAGATCTTCGGGAAAGATTTGCCTTGGGTAACGCTCCACGCATATTTCAAGTTCAGAGAGATATATATAGGATTGAGCAAGGGCAGATGTCTATCGCTGCCTATTACACAAAGCTGAAGGCTCTTTGGGACAAACTTGCTTCCTACAATACTTCAGTGACTTGCACTTGTGGAGCTCAGAATGATCGCACCAAACTCATGCAATTTCTCATGGGGTTGAATGAATCCTATGCAGGTACGCGTGGTCAAATTTTATTAATGAACCCATTGCCTTCTGTACGACAGGCTTATGCTTCTGTCACTCAAGAGGAAAAGCAGCGTGAGCTTGGATCCTCTGTCCTTGCATCATCCGACACAGCAGCAATGGCTGTGCGCAACAACAATACTTTCAGGCCACGACAACAGAACCAAGATACTCAAGGCAACAACTACCGCAATCGGGTTCCAGTTAAGCAATGCACTTATTGTGGTTTGAACTATCACACAGAAGACACATGTCACAAGAAACATGGTTATCCACCTGGTCACCGACTTTACAAGCCCCGCAATCAACGTCCAGGAAATTCTGCCATGTCACGCAACAATATTTCTGCAAATCATGTTGACTCAACCCCATCTTTTAAAGAGCTTCAAGCCACACTTCCCAACCTTACTGAAGACCAATATGCTCAAGTCATTGCTGCTCTAAATCCCAAGCCAACATCTCCTCAAGCAAATGCCGCTTCTGCATCTGAGTTCGCCTCAGGACTTGGCTTCGAGGACGATGATTGGTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

379

Amino Acids

42.1

Weight (kDa)

6.79

Isoelectric Point (pI)

37.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 29 - 75 9.4e-20 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 55 - 229 4.5e-08 gag-polypeptide of LTR copia-type
Retrotrans_gag PF03732 117 - 195 2.3e-06 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 734
Acc36I ACCTGC 1 cut(s) 584
AccII CGCG 1 cut(s) 601
AciI CCGC 3 cut(s) 793, 904, 1080
AclI AACGTT 1 cut(s) 265
AclWI GGATC 3 cut(s) 321, 684, 697
AcsI RAATTY 2 cut(s) 609, 922
AcuI CTGAAG 3 cut(s) 497, 498, 1035
AfaI GTAC 2 cut(s) 598, 639
AfiI CCNNNNNNNGG 1 cut(s) 799
AflII CTTAAG 1 cut(s) 175
AflIII ACRYGT 2 cut(s) 599, 854
AgeI ACCGGT 1 cut(s) 194
AgsI TTSAA 6 cut(s) 238, 308, 410, 580, 835, 992
AjnI CCWGG 3 cut(s) 100, 880, 916
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
AluBI AGCT 5 cut(s) 48, 475, 536, 685, 988
AluI AGCT 5 cut(s) 48, 475, 536, 685, 988
Alw21I GWGCWC 1 cut(s) 538
Alw26I GTCTC 1 cut(s) 121
AlwI GGATC 3 cut(s) 321, 684, 697
AoxI GGCC 1 cut(s) 752
ApeKI GCWGC 4 cut(s) 458, 676, 719, 1040
ApoI RAATTY 2 cut(s) 609, 922
AseI ATTAAT 1 cut(s) 617
AsiGI ACCGGT 1 cut(s) 194
Asp700I GAANNNNTTC 1 cut(s) 366
AspLEI GCGC 2 cut(s) 182, 735
AspS9I GGNCC 1 cut(s) 280
AsuHPI GGTGA 5 cut(s) 20, 50, 146, 196, 878
AvaII GGWCC 1 cut(s) 280
AxyI CCTNAGG 1 cut(s) 1102
BamHI GGATCC 1 cut(s) 689
BanII GRGCYC 1 cut(s) 538
BbsI GAAGAC 3 cut(s) 18, 855, 1023
Bbv12I GWGCWC 1 cut(s) 538
BbvI GCAGC 4 cut(s) 445, 688, 731, 1027
BccI CCATC 1 cut(s) 982
BceAI ACGGC 1 cut(s) 338
BciT130I CCWGG 3 cut(s) 102, 882, 918
BcoDI GTCTC 1 cut(s) 121
BfoI RGCGCY 1 cut(s) 183
BfrI CTTAAG 1 cut(s) 175
BfuAI ACCTGC 1 cut(s) 584
BglII AGATCT 1 cut(s) 364
BisI GCNGC 5 cut(s) 459, 677, 720, 1041, 1080
BlsI GCNGC 5 cut(s) 460, 678, 721, 1042, 1081
Bme1390I CCNGG 3 cut(s) 102, 882, 918
Bme18I GGWCC 1 cut(s) 280
BmgT120I GGNCC 1 cut(s) 280
BmiI GGNNCC 3 cut(s) 222, 691, 804
BmrFI CCNGG 3 cut(s) 102, 882, 918
BmsI GCATC 2 cut(s) 713, 1097
BoxI GACNNNNGTC 1 cut(s) 855
BpiI GAAGAC 3 cut(s) 18, 855, 1023
BplI GAGNNNNNCTC 2 cut(s) 1085, 1117
BpuEI CTTGAG 4 cut(s) 648, 762, 1014, 1053
BsaBI GATNNNNATC 1 cut(s) 452
BsaJI CCNNGG 1 cut(s) 384
BsaWI WCCGGW 4 cut(s) 35, 194, 206, 310
Bsc4I CCNNNNNNNGG 1 cut(s) 799
Bse118I RCCGGY 1 cut(s) 194
Bse1I ACTGG 2 cut(s) 136, 806
Bse21I CCTNAGG 1 cut(s) 1102
Bse3DI GCAATG 4 cut(s) 626, 729, 821, 1035
Bse8I GATNNNNATC 1 cut(s) 452
BseBI CCWGG 3 cut(s) 102, 882, 918
BseDI CCNNGG 1 cut(s) 384
BseGI GGATG 2 cut(s) 97, 707
BseJI GATNNNNATC 1 cut(s) 452
BseLI CCNNNNNNNGG 1 cut(s) 799
BseMI GCAATG 4 cut(s) 626, 729, 821, 1035
BseMII CTCAG 3 cut(s) 551, 1083, 1116
BseNI ACTGG 2 cut(s) 136, 806
BseRI GAGGAG 3 cut(s) 16, 336, 1056
BseXI GCAGC 4 cut(s) 445, 688, 731, 1027
Bsh1236I CGCG 1 cut(s) 601
BshFI GGCC 1 cut(s) 754
BshTI ACCGGT 1 cut(s) 194
BsiHKAI GWGCWC 1 cut(s) 538
BsiSI CCGG 4 cut(s) 36, 195, 207, 311
BslFI GGGAC 1 cut(s) 503
BslI CCNNNNNNNGG 1 cut(s) 799
BsmAI GTCTC 1 cut(s) 121
BsmFI GGGAC 1 cut(s) 503
BsnI GGCC 1 cut(s) 754
Bsp1286I GDGCHC 1 cut(s) 538
Bsp143I GATC 5 cut(s) 94, 313, 364, 544, 689
BspACI CCGC 3 cut(s) 793, 904, 1080
BspANI GGCC 1 cut(s) 754
BspCNI CTCAG 3 cut(s) 550, 1084, 1115
BspFNI CGCG 1 cut(s) 601
BspLI GGNNCC 3 cut(s) 222, 691, 804
BspMI ACCTGC 1 cut(s) 584
BspPI GGATC 3 cut(s) 321, 684, 697
BspTI CTTAAG 1 cut(s) 175
BsrDI GCAATG 4 cut(s) 626, 729, 821, 1035
BsrFI RCCGGY 1 cut(s) 194
BsrI ACTGG 2 cut(s) 136, 806
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 1 cut(s) 384
BssMI GATC 5 cut(s) 94, 313, 364, 544, 689
BssT1I CCWWGG 1 cut(s) 384
Bst2UI CCWGG 3 cut(s) 102, 882, 918
BstAFI CTTAAG 1 cut(s) 175
BstC8I GCNNGC 1 cut(s) 252
BstDEI CTNAG 3 cut(s) 537, 1092, 1102
BstEII GGTNACC 1 cut(s) 884
BstF5I GGATG 2 cut(s) 97, 707
BstFNI CGCG 1 cut(s) 601
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 2 cut(s) 182, 735
BstKTI GATC 5 cut(s) 97, 316, 367, 547, 692
BstMAI GTCTC 1 cut(s) 121
BstMBI GATC 5 cut(s) 94, 313, 364, 544, 689
BstMWI GCNNNNNNNGC 5 cut(s) 247, 682, 725, 1079, 1085
BstNI CCWGG 3 cut(s) 102, 882, 918
BstNSI RCATGY 2 cut(s) 254, 858
BstPAI GACNNNNGTC 1 cut(s) 855
BstPI GGTNACC 1 cut(s) 884
BstSCI CCNGG 3 cut(s) 100, 880, 916
BstUI CGCG 1 cut(s) 601
BstV1I GCAGC 4 cut(s) 445, 688, 731, 1027
BstV2I GAAGAC 3 cut(s) 18, 855, 1023
BstX2I RGATCY 3 cut(s) 313, 364, 689
BstYI RGATCY 3 cut(s) 313, 364, 689
Bsu36I CCTNAGG 1 cut(s) 1102
BsuRI GGCC 1 cut(s) 754
BtsCI GGATG 2 cut(s) 97, 707
BtsIMutI CAGTG 1 cut(s) 522
BveI ACCTGC 1 cut(s) 584
Cac8I GCNNGC 1 cut(s) 252
CfoI GCGC 2 cut(s) 182, 735
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 1 cut(s) 280
CsiI ACCWGGT 1 cut(s) 880
Csp6I GTAC 2 cut(s) 597, 638
CspAI ACCGGT 1 cut(s) 194
CviAII CATG 9 cut(s) 251, 336, 350, 559, 571, 855, 869, 931, 959
CviQI GTAC 2 cut(s) 597, 638
DdeI CTNAG 3 cut(s) 537, 1092, 1102
DpnI GATC 5 cut(s) 96, 315, 366, 546, 691
DpnII GATC 5 cut(s) 94, 313, 364, 544, 689
DraI TTTAAA 1 cut(s) 982
Ecl136II GAGCTC 1 cut(s) 536
Eco130I CCWWGG 1 cut(s) 384
Eco24I GRGCYC 1 cut(s) 538
Eco47I GGWCC 1 cut(s) 280
Eco53kI GAGCTC 1 cut(s) 536
Eco57I CTGAAG 3 cut(s) 497, 498, 1035
Eco81I CCTNAGG 1 cut(s) 1102
Eco91I GGTNACC 1 cut(s) 884
EcoICRI GAGCTC 1 cut(s) 536
EcoO65I GGTNACC 1 cut(s) 884
EcoRII CCWGG 3 cut(s) 100, 880, 916
EcoT14I CCWWGG 1 cut(s) 384
EcoT38I GRGCYC 1 cut(s) 538
ErhI CCWWGG 1 cut(s) 384
FaeI CATG 9 cut(s) 254, 339, 353, 562, 574, 858, 872, 934, 962
FalI AAGNNNNNCTT 2 cut(s) 984, 1016
FaqI GGGAC 1 cut(s) 503
FatI CATG 9 cut(s) 250, 335, 349, 558, 570, 854, 868, 930, 958
FauI CCCGC 1 cut(s) 911
Fnu4HI GCNGC 5 cut(s) 459, 677, 720, 1041, 1080
FokI GGATG 2 cut(s) 84, 694
FriOI GRGCYC 1 cut(s) 538
Fsp4HI GCNGC 5 cut(s) 459, 677, 720, 1041, 1080
FspI TGCGCA 1 cut(s) 734
GlaI GCGC 2 cut(s) 181, 734
GluI GCNGC 5 cut(s) 459, 677, 720, 1041, 1080
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 1 cut(s) 754
HapII CCGG 4 cut(s) 36, 195, 207, 311
HhaI GCGC 2 cut(s) 182, 735
Hin1II CATG 9 cut(s) 254, 339, 353, 562, 574, 858, 872, 934, 962
Hin6I GCGC 2 cut(s) 180, 733
HinP1I GCGC 2 cut(s) 180, 733
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HinfI GANTC 6 cut(s) 62, 168, 292, 323, 584, 965
HpaII CCGG 4 cut(s) 36, 195, 207, 311
HphI GGTGA 5 cut(s) 20, 50, 146, 196, 878
Hpy166II GTNNAC 1 cut(s) 964
Hpy188I TCNGA 5 cut(s) 94, 417, 540, 712, 1093
Hpy188III TCNNGA 3 cut(s) 371, 665, 1104
Hpy8I GTNNAC 1 cut(s) 964
HpyAV CCTTC 2 cut(s) 472, 642
HpyCH4IV ACGT 2 cut(s) 265, 913
HpyCH4V TGCA 9 cut(s) 230, 339, 525, 562, 593, 704, 819, 953, 1088
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 682, 725, 1079, 1085
HpyF3I CTNAG 3 cut(s) 537, 1092, 1102
HpySE526I ACGT 2 cut(s) 265, 913
Hsp92II CATG 9 cut(s) 254, 339, 353, 562, 574, 858, 872, 934, 962
HspAI GCGC 2 cut(s) 180, 733
Kzo9I GATC 5 cut(s) 94, 313, 364, 544, 689
LmnI GCTCC 3 cut(s) 114, 400, 533
Lsp1109I GCAGC 4 cut(s) 445, 688, 731, 1027
LweI GCATC 2 cut(s) 713, 1097
MabI ACCWGGT 1 cut(s) 880
MaeII ACGT 2 cut(s) 265, 913
MaeIII GTNAC 7 cut(s) 134, 389, 517, 658, 857, 884, 933
MalI GATC 5 cut(s) 96, 315, 366, 546, 691
MboI GATC 5 cut(s) 94, 313, 364, 544, 689
MboII GAAGA 5 cut(s) 23, 359, 374, 860, 1028
MflI RGATCY 3 cut(s) 313, 364, 689
MhlI GDGCHC 1 cut(s) 538
MluCI AATT 6 cut(s) 125, 139, 298, 563, 609, 922
MluI ACGCGT 1 cut(s) 599
MlyI GAGTC 1 cut(s) 959
MmeI TCCRAC 1 cut(s) 735
MroXI GAANNNNTTC 1 cut(s) 366
MseI TTAA 4 cut(s) 176, 617, 810, 981
MspCI CTTAAG 1 cut(s) 175
MspI CCGG 4 cut(s) 36, 195, 207, 311
MspR9I CCNGG 3 cut(s) 102, 882, 918
MvaI CCWGG 3 cut(s) 102, 882, 918
MvnI CGCG 1 cut(s) 601
MwoI GCNNNNNNNGC 5 cut(s) 247, 682, 725, 1079, 1085
NdeII GATC 5 cut(s) 94, 313, 364, 544, 689
NlaIII CATG 9 cut(s) 254, 339, 353, 562, 574, 858, 872, 934, 962
NlaIV GGNNCC 3 cut(s) 222, 691, 804
NmuCI GTSAC 6 cut(s) 134, 517, 658, 857, 884, 933
NsbI TGCGCA 1 cut(s) 734
NspI RCATGY 2 cut(s) 254, 858
PaeI GCATGC 1 cut(s) 254
PciI ACATGT 1 cut(s) 854
PdmI GAANNNNTTC 1 cut(s) 366
PfeI GAWTC 5 cut(s) 62, 168, 292, 323, 584
PflFI GACNNNGTC 1 cut(s) 17
PfoI TCCNGGA 1 cut(s) 916
PinAI ACCGGT 1 cut(s) 194
PkrI GCNGC 5 cut(s) 460, 678, 721, 1042, 1081
PleI GAGTC 1 cut(s) 959
PpsI GAGTC 1 cut(s) 959
PscI ACATGT 1 cut(s) 854
PshAI GACNNNNGTC 1 cut(s) 855
PshBI ATTAAT 1 cut(s) 617
Psp124BI GAGCTC 1 cut(s) 538
Psp1406I AACGTT 1 cut(s) 265
Psp6I CCWGG 3 cut(s) 100, 880, 916
PspEI GGTNACC 1 cut(s) 884
PspGI CCWGG 3 cut(s) 100, 880, 916
PspN4I GGNNCC 3 cut(s) 222, 691, 804
PspPI GGNCC 1 cut(s) 280
PsuI RGATCY 3 cut(s) 313, 364, 689
PsyI GACNNNGTC 1 cut(s) 17
RsaI GTAC 2 cut(s) 598, 639
RsaNI GTAC 2 cut(s) 597, 638
SacI GAGCTC 1 cut(s) 538
SaqAI TTAA 4 cut(s) 176, 617, 810, 981
SatI GCNGC 5 cut(s) 459, 677, 720, 1041, 1080
Sau3AI GATC 5 cut(s) 94, 313, 364, 544, 689
Sau96I GGNCC 1 cut(s) 280
SchI GAGTC 1 cut(s) 959
ScrFI CCNGG 3 cut(s) 102, 882, 918
SduI GDGCHC 1 cut(s) 538
SexAI ACCWGGT 1 cut(s) 880
SfaNI GCATC 2 cut(s) 713, 1097
SinI GGWCC 1 cut(s) 280
SmlI CTYRAG 5 cut(s) 175, 663, 777, 1029, 1068
SmoI CTYRAG 5 cut(s) 175, 663, 777, 1029, 1068
SphI GCATGC 1 cut(s) 254
Sse9I AATT 6 cut(s) 125, 139, 298, 563, 609, 922
SsiI CCGC 3 cut(s) 793, 904, 1080
SspI AATATT 1 cut(s) 946
SstI GAGCTC 1 cut(s) 538
StyD4I CCNGG 3 cut(s) 100, 880, 916
StyI CCWWGG 1 cut(s) 384
TaiI ACGT 2 cut(s) 268, 916
TaqI TCGA 1 cut(s) 1116
TasI AATT 6 cut(s) 125, 139, 298, 563, 609, 922
TauI GCSGC 1 cut(s) 1082
TfiI GAWTC 5 cut(s) 62, 168, 292, 323, 584
Tru1I TTAA 4 cut(s) 176, 617, 810, 981
Tru9I TTAA 4 cut(s) 176, 617, 810, 981
TscAI CASTG 1 cut(s) 522
TseFI GTSAC 6 cut(s) 134, 517, 658, 857, 884, 933
TseI GCWGC 4 cut(s) 458, 676, 719, 1040
Tsp45I GTSAC 6 cut(s) 134, 517, 658, 857, 884, 933
TspDTI ATGAA 4 cut(s) 75, 324, 597, 635
TspRI CASTG 1 cut(s) 522
Tth111I GACNNNGTC 1 cut(s) 17
Vha464I CTTAAG 1 cut(s) 175
VpaK11BI GGWCC 1 cut(s) 280
VspI ATTAAT 1 cut(s) 617
XapI RAATTY 2 cut(s) 609, 922
XceI RCATGY 2 cut(s) 254, 858
XmnI GAANNNNTTC 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.