Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 262 |
| AciI | CCGC | 5 cut(s) | 176, 211, 214, 262, 459 |
| AclWI | GGATC | 1 cut(s) | 295 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 261 |
| AgsI | TTSAA | 1 cut(s) | 413 |
| AluBI | AGCT | 3 cut(s) | 233, 275, 308 |
| AluI | AGCT | 3 cut(s) | 233, 275, 308 |
| Alw21I | GWGCWC | 1 cut(s) | 470 |
| AlwI | GGATC | 1 cut(s) | 295 |
| AoxI | GGCC | 1 cut(s) | 329 |
| ApeKI | GCWGC | 2 cut(s) | 272, 434 |
| AspS9I | GGNCC | 2 cut(s) | 7, 329 |
| AsuHPI | GGTGA | 5 cut(s) | 6, 133, 193, 200, 395 |
| AvaII | GGWCC | 1 cut(s) | 7 |
| Bbv12I | GWGCWC | 1 cut(s) | 470 |
| BbvI | GCAGC | 2 cut(s) | 284, 446 |
| BccI | CCATC | 6 cut(s) | 74, 174, 190, 288, 322, 404 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BisI | GCNGC | 4 cut(s) | 214, 263, 273, 435 |
| BlsI | GCNGC | 4 cut(s) | 215, 264, 274, 436 |
| Bme18I | GGWCC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 2 cut(s) | 7, 329 |
| BpuEI | CTTGAG | 1 cut(s) | 414 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 261 |
| Bse1I | ACTGG | 1 cut(s) | 77 |
| BseGI | GGATG | 1 cut(s) | 280 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BseNI | ACTGG | 1 cut(s) | 77 |
| BseRI | GAGGAG | 2 cut(s) | 244, 300 |
| BseXI | GCAGC | 2 cut(s) | 284, 446 |
| BseYI | CCCAGC | 2 cut(s) | 225, 304 |
| Bsh1236I | CGCG | 1 cut(s) | 262 |
| BshFI | GGCC | 1 cut(s) | 331 |
| BsiHKAI | GWGCWC | 1 cut(s) | 470 |
| BslFI | GGGAC | 2 cut(s) | 11, 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BsmFI | GGGAC | 2 cut(s) | 11, 109 |
| BsnI | GGCC | 1 cut(s) | 331 |
| Bsp1286I | GDGCHC | 1 cut(s) | 470 |
| Bsp143I | GATC | 1 cut(s) | 300 |
| BspACI | CCGC | 5 cut(s) | 176, 211, 214, 262, 459 |
| BspANI | GGCC | 1 cut(s) | 331 |
| BspFNI | CGCG | 1 cut(s) | 262 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspPI | GGATC | 1 cut(s) | 295 |
| BsrI | ACTGG | 1 cut(s) | 77 |
| BssMI | GATC | 1 cut(s) | 300 |
| Bst4CI | ACNGT | 2 cut(s) | 7, 152 |
| Bst6I | CTCTTC | 1 cut(s) | 262 |
| BstC8I | GCNNGC | 4 cut(s) | 158, 162, 218, 231 |
| BstF5I | GGATG | 1 cut(s) | 280 |
| BstFNI | CGCG | 1 cut(s) | 262 |
| BstKTI | GATC | 1 cut(s) | 303 |
| BstMBI | GATC | 1 cut(s) | 300 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 170, 226, 235 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstUI | CGCG | 1 cut(s) | 262 |
| BstV1I | GCAGC | 2 cut(s) | 284, 446 |
| BsuRI | GGCC | 1 cut(s) | 331 |
| BtsCI | GGATG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 2 cut(s) | 148, 239 |
| Cac8I | GCNNGC | 4 cut(s) | 158, 162, 218, 231 |
| Cfr13I | GGNCC | 2 cut(s) | 7, 329 |
| CviAII | CATG | 1 cut(s) | 463 |
| DpnI | GATC | 1 cut(s) | 302 |
| DpnII | GATC | 1 cut(s) | 300 |
| Eam1104I | CTCTTC | 1 cut(s) | 262 |
| EarI | CTCTTC | 1 cut(s) | 262 |
| EciI | GGCGGA | 1 cut(s) | 448 |
| Eco47I | GGWCC | 1 cut(s) | 7 |
| FaeI | CATG | 1 cut(s) | 466 |
| FaiI | YATR | 7 cut(s) | 130, 191, 321, 378, 383, 464, 472 |
| FaqI | GGGAC | 2 cut(s) | 11, 109 |
| FatI | CATG | 1 cut(s) | 462 |
| Fnu4HI | GCNGC | 4 cut(s) | 214, 263, 273, 435 |
| FokI | GGATG | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 4 cut(s) | 214, 263, 273, 435 |
| GluI | GCNGC | 4 cut(s) | 214, 263, 273, 435 |
| GsaI | CCCAGC | 2 cut(s) | 229, 308 |
| HaeIII | GGCC | 1 cut(s) | 331 |
| Hin1II | CATG | 1 cut(s) | 466 |
| HincII | GTYRAC | 1 cut(s) | 347 |
| HindII | GTYRAC | 1 cut(s) | 347 |
| HinfI | GANTC | 1 cut(s) | 196 |
| HphI | GGTGA | 5 cut(s) | 6, 133, 193, 200, 395 |
| Hpy166II | GTNNAC | 1 cut(s) | 347 |
| Hpy8I | GTNNAC | 1 cut(s) | 347 |
| Hpy99I | CGWCG | 1 cut(s) | 345 |
| HpyAV | CCTTC | 4 cut(s) | 45, 56, 72, 102 |
| HpyCH4III | ACNGT | 2 cut(s) | 7, 152 |
| HpyCH4V | TGCA | 2 cut(s) | 173, 272 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 170, 226, 235 |
| Hsp92II | CATG | 1 cut(s) | 466 |
| Kzo9I | GATC | 1 cut(s) | 300 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| Lsp1109I | GCAGC | 2 cut(s) | 284, 446 |
| MaeIII | GTNAC | 2 cut(s) | 388, 422 |
| MalI | GATC | 1 cut(s) | 302 |
| MboI | GATC | 1 cut(s) | 300 |
| MboII | GAAGA | 2 cut(s) | 240, 249 |
| MhlI | GDGCHC | 1 cut(s) | 470 |
| MluCI | AATT | 1 cut(s) | 408 |
| MnlI | CCTC | 8 cut(s) | 60, 113, 130, 262, 265, 295, 321, 334 |
| MseI | TTAA | 1 cut(s) | 360 |
| MvnI | CGCG | 1 cut(s) | 262 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 170, 226, 235 |
| NdeII | GATC | 1 cut(s) | 300 |
| NlaIII | CATG | 1 cut(s) | 466 |
| NmuCI | GTSAC | 1 cut(s) | 388 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 119 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| PkrI | GCNGC | 4 cut(s) | 215, 264, 274, 436 |
| PspFI | CCCAGC | 2 cut(s) | 225, 304 |
| PspPI | GGNCC | 2 cut(s) | 7, 329 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| SaqAI | TTAA | 1 cut(s) | 360 |
| SatI | GCNGC | 4 cut(s) | 214, 263, 273, 435 |
| Sau3AI | GATC | 1 cut(s) | 300 |
| Sau96I | GGNCC | 2 cut(s) | 7, 329 |
| SduI | GDGCHC | 1 cut(s) | 470 |
| SetI | ASST | 8 cut(s) | 105, 122, 146, 206, 235, 277, 310, 326 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| SinI | GGWCC | 1 cut(s) | 7 |
| SmlI | CTYRAG | 1 cut(s) | 429 |
| SmoI | CTYRAG | 1 cut(s) | 429 |
| Sse9I | AATT | 1 cut(s) | 408 |
| SsiI | CCGC | 5 cut(s) | 176, 211, 214, 262, 459 |
| TaaI | ACNGT | 2 cut(s) | 7, 152 |
| TasI | AATT | 1 cut(s) | 408 |
| TauI | GCSGC | 2 cut(s) | 216, 265 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| Tru1I | TTAA | 1 cut(s) | 360 |
| Tru9I | TTAA | 1 cut(s) | 360 |
| TscAI | CASTG | 2 cut(s) | 155, 246 |
| TseFI | GTSAC | 1 cut(s) | 388 |
| TseI | GCWGC | 2 cut(s) | 272, 434 |
| Tsp45I | GTSAC | 1 cut(s) | 388 |
| TspRI | CASTG | 2 cut(s) | 155, 246 |
| VpaK11BI | GGWCC | 1 cut(s) | 7 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 379 |