Rw2G024990
RLK Family

Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000106
Physical Location & Seq
Forward (+)
37123751 .. 37125180
1430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G024990.1

Sequence Viewer

Length: 1134 bp
ATGGCCCTTGAAGACGAGATTCTTTCTCCTGCTACCAATGGCAGCACTTCCTCTATTGATGAGACTGCGAATCCCTTGTTTCTCCATTATTCTGATCATCCTGGTTTGCTTCTTGTATCAAAAAAGTTAACTAGTGACAATTACAATTCATGGTGTCGCGCTATGAGGATATCTTTGAGCGCCAAGAACAAGACCGGATTCATCACCGGTACGATAAAAGAGCCTTCTGCAATCAAGAAGCCCGAAGAACATGCCCTATGGCAACGCTGCAACGACATGGTCCTATCCTGGATCCTTAATTCCCTTGAACCGGACCTTGCTGATTCGGTCCTTTCTTGCACAACTCCTCATGCAATCTGGGAGGATCTCAGGGAACGATTTGCCTTGGGAAATGCTCCAGGCATCTTTCAAGTTCAACGAGATATTTACAGAATTGAACAAGGGCAGATGTCCATTGCCGCTTATTATACCAAATTGAAGGCACTTTGGGATGAACTCGCCTCATACAATACTGCAGAAAATTGTACCTGTGGAGCTCAGAATGATCGCACCAAACTCATGCAATTCCTCATGGGATTGAATGAATCGTATGCAGGTACTCGTGGTCAAATTTTATTAATGAATCCATTGTCTTTTGTTAGACAAGCCTATGCTTCTGTAACTCAGGAAGAAAAGCAGCGTGAACTCGGCTCTACCTCCCTTGTTCCATCTAATACGGCAGCTATGGCTGTGCGCAATACCCATGCTTTTAGGCCACATACGTTGAATCAAGGTGACCAAGGCAGCAACTCTCGCAATCGCCCTCCAGTTCAGTGCACTTATTGTGAGAAATATTTCCATACTGAGGAGACTTGTCACAAGAAACATGGTTATCCACCTGGCCACCGGCTCTATAAACGCAATGAAAGACAAGGCAGCAGATCTGTGCCACACACCAATTCCTCTGTCAATCACGTTGATTGTACTCCATCTTTCAAAGAGCTTCAGGCCACACTTCCTGATCTTACTGAGGATCAGTATACTCAAGTCATTGCCGCACTGAATCCCAAACAAACAACTCCTCAAGCCAATGCAGCCTCTGCCTCTGAATTTGCCTCAGGACTTGGCTACGAGGATGATGATTGGTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

377

Amino Acids

42.12

Weight (kDa)

6.07

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 29 - 76 3.1e-18 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 55 - 228 6.4e-06 gag-polypeptide of LTR copia-type
Retrotrans_gag PF03732 117 - 195 9.3e-06 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 734
Acc36I ACCTGC 1 cut(s) 584
AccI GTMKAC 1 cut(s) 1019
AccII CGCG 1 cut(s) 159
AciI CCGC 2 cut(s) 459, 1035
AclWI GGATC 4 cut(s) 286, 299, 372, 1020
AcoI YGGCCR 1 cut(s) 880
AcsI RAATTY 2 cut(s) 609, 1088
AcuI CTGAAG 1 cut(s) 968
AfaI GTAC 4 cut(s) 211, 526, 598, 964
AfiI CCNNNNNNNGG 2 cut(s) 310, 844
AgeI ACCGGT 1 cut(s) 206
AgsI TTSAA 9 cut(s) 11, 308, 410, 416, 437, 478, 580, 766, 976
AhlI ACTAGT 1 cut(s) 131
AjnI CCWGG 4 cut(s) 100, 287, 397, 877
AluBI AGCT 3 cut(s) 536, 722, 982
AluI AGCT 3 cut(s) 536, 722, 982
Alw21I GWGCWC 2 cut(s) 538, 818
Alw26I GTCTC 2 cut(s) 56, 842
Alw44I GTGCAC 1 cut(s) 814
AlwI GGATC 4 cut(s) 286, 299, 372, 1020
AlwNI CAGNNNCTG 1 cut(s) 1079
AoxI GGCC 4 cut(s) 3, 752, 880, 987
ApaLI GTGCAC 1 cut(s) 814
ApeKI GCWGC 7 cut(s) 42, 267, 676, 719, 783, 915, 1073
ApoI RAATTY 2 cut(s) 609, 1088
AseI ATTAAT 1 cut(s) 617
AsiGI ACCGGT 1 cut(s) 206
Asp700I GAANNNNTTC 1 cut(s) 833
AspLEI GCGC 3 cut(s) 161, 182, 735
AspS9I GGNCC 4 cut(s) 4, 280, 313, 328
AsuHPI GGTGA 2 cut(s) 196, 785
AvaII GGWCC 3 cut(s) 280, 313, 328
AxyI CCTNAGG 1 cut(s) 1096
BaeGI GKGCMC 1 cut(s) 818
BalI TGGCCA 1 cut(s) 882
BamHI GGATCC 1 cut(s) 291
BanII GRGCYC 1 cut(s) 538
BauI CACGAG 1 cut(s) 600
BbsI GAAGAC 1 cut(s) 18
Bbv12I GWGCWC 2 cut(s) 538, 818
BbvI GCAGC 7 cut(s) 54, 254, 688, 731, 795, 927, 1085
BccI CCATC 2 cut(s) 715, 976
BceAI ACGGC 1 cut(s) 732
BcgI CGANNNNNNTGC 2 cut(s) 233, 267
BciT130I CCWGG 4 cut(s) 102, 289, 399, 879
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 2 cut(s) 56, 842
BcuI ACTAGT 1 cut(s) 131
BfaI CTAG 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 513
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 1 cut(s) 584
BglII AGATCT 1 cut(s) 920
BisI GCNGC 9 cut(s) 43, 268, 459, 677, 720, 784, 916, 1035, 1074
BlsI GCNGC 9 cut(s) 44, 269, 460, 678, 721, 785, 917, 1036, 1075
Bme1390I CCNGG 4 cut(s) 102, 289, 399, 879
Bme18I GGWCC 3 cut(s) 280, 313, 328
BmgT120I GGNCC 4 cut(s) 4, 280, 313, 328
BmiI GGNNCC 1 cut(s) 293
BmrFI CCNGG 4 cut(s) 102, 289, 399, 879
BmsI GCATC 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 18
BpmI CTGGAG 2 cut(s) 381, 789
BpuEI CTTGAG 2 cut(s) 1008, 1047
BsaJI CCNNGG 2 cut(s) 384, 778
BsaWI WCCGGW 3 cut(s) 194, 206, 310
Bsc4I CCNNNNNNNGG 2 cut(s) 310, 844
Bse118I RCCGGY 2 cut(s) 206, 885
Bse1I ACTGG 1 cut(s) 806
Bse21I CCTNAGG 1 cut(s) 1096
Bse3DI GCAATG 3 cut(s) 453, 907, 1029
BseBI CCWGG 4 cut(s) 102, 289, 399, 879
BseDI CCNNGG 2 cut(s) 384, 778
BseGI GGATG 3 cut(s) 97, 496, 1120
BseLI CCNNNNNNNGG 2 cut(s) 310, 844
BseMI GCAATG 3 cut(s) 453, 907, 1029
BseMII CTCAG 6 cut(s) 382, 551, 677, 834, 999, 1110
BseNI ACTGG 1 cut(s) 806
BseRI GAGGAG 3 cut(s) 336, 860, 1050
BseSI GKGCMC 1 cut(s) 818
BseXI GCAGC 7 cut(s) 54, 254, 688, 731, 795, 927, 1085
Bsh1236I CGCG 1 cut(s) 159
BshFI GGCC 4 cut(s) 5, 754, 882, 989
BshTI ACCGGT 1 cut(s) 206
BsiHKAI GWGCWC 2 cut(s) 538, 818
BsiSI CCGG 4 cut(s) 195, 207, 311, 886
BslI CCNNNNNNNGG 2 cut(s) 310, 844
BsmAI GTCTC 2 cut(s) 56, 842
BsnI GGCC 4 cut(s) 5, 754, 882, 989
Bsp1286I GDGCHC 2 cut(s) 538, 818
Bsp143I GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
BspACI CCGC 2 cut(s) 459, 1035
BspANI GGCC 4 cut(s) 5, 754, 882, 989
BspCNI CTCAG 6 cut(s) 381, 550, 676, 835, 1000, 1109
BspFNI CGCG 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 293
BspMAI CTGCAG 1 cut(s) 517
BspMI ACCTGC 1 cut(s) 584
BspPI GGATC 4 cut(s) 286, 299, 372, 1020
BsrDI GCAATG 3 cut(s) 453, 907, 1029
BsrFI RCCGGY 2 cut(s) 206, 885
BsrI ACTGG 1 cut(s) 806
BssAI RCCGGY 2 cut(s) 206, 885
BssECI CCNNGG 2 cut(s) 384, 778
BssMI GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
BssNAI GTATAC 1 cut(s) 1020
BssSI CACGAG 1 cut(s) 600
BssT1I CCWWGG 2 cut(s) 384, 778
Bst1107I GTATAC 1 cut(s) 1020
Bst2BI CACGAG 1 cut(s) 600
Bst2UI CCWGG 4 cut(s) 102, 289, 399, 879
BstAPI GCANNNNNTGC 1 cut(s) 1079
BstDEI CTNAG 6 cut(s) 368, 537, 663, 843, 1008, 1096
BstEII GGTNACC 1 cut(s) 773
BstF5I GGATG 3 cut(s) 97, 496, 1120
BstFNI CGCG 1 cut(s) 159
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 3 cut(s) 161, 182, 735
BstKTI GATC 7 cut(s) 97, 294, 367, 547, 923, 1003, 1015
BstMAI GTCTC 2 cut(s) 56, 842
BstMBI GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
BstMWI GCNNNNNNNGC 4 cut(s) 725, 792, 1073, 1079
BstNI CCWGG 4 cut(s) 102, 289, 399, 879
BstNSI RCATGY 1 cut(s) 254
BstPI GGTNACC 1 cut(s) 773
BstSCI CCNGG 4 cut(s) 100, 287, 397, 877
BstSFI CTRYAG 1 cut(s) 513
BstSLI GKGCMC 1 cut(s) 818
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 7 cut(s) 54, 254, 688, 731, 795, 927, 1085
BstV2I GAAGAC 1 cut(s) 18
BstX2I RGATCY 3 cut(s) 291, 364, 920
BstYI RGATCY 3 cut(s) 291, 364, 920
BstZ17I GTATAC 1 cut(s) 1020
Bsu36I CCTNAGG 1 cut(s) 1096
BsuRI GGCC 4 cut(s) 5, 754, 882, 989
BtsCI GGATG 3 cut(s) 97, 496, 1120
BtsIMutI CAGTG 2 cut(s) 818, 1037
BveI ACCTGC 1 cut(s) 584
CaiI CAGNNNCTG 1 cut(s) 1079
CfoI GCGC 3 cut(s) 161, 182, 735
Cfr10I RCCGGY 2 cut(s) 206, 885
Cfr13I GGNCC 4 cut(s) 4, 280, 313, 328
Csp6I GTAC 4 cut(s) 210, 525, 597, 963
CspAI ACCGGT 1 cut(s) 206
CspCI CAANNNNNGTGG 2 cut(s) 744, 779
CviAII CATG 8 cut(s) 150, 251, 277, 350, 559, 571, 743, 866
CviQI GTAC 4 cut(s) 210, 525, 597, 963
DdeI CTNAG 6 cut(s) 368, 537, 663, 843, 1008, 1096
DpnI GATC 7 cut(s) 96, 293, 366, 546, 922, 1002, 1014
DpnII GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
EaeI YGGCCR 1 cut(s) 880
Ecl136II GAGCTC 1 cut(s) 536
Eco130I CCWWGG 2 cut(s) 384, 778
Eco24I GRGCYC 1 cut(s) 538
Eco32I GATATC 1 cut(s) 171
Eco47I GGWCC 3 cut(s) 280, 313, 328
Eco53kI GAGCTC 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 968
Eco81I CCTNAGG 1 cut(s) 1096
Eco91I GGTNACC 1 cut(s) 773
EcoICRI GAGCTC 1 cut(s) 536
EcoO65I GGTNACC 1 cut(s) 773
EcoRII CCWGG 4 cut(s) 100, 287, 397, 877
EcoRV GATATC 1 cut(s) 171
EcoT14I CCWWGG 2 cut(s) 384, 778
EcoT38I GRGCYC 1 cut(s) 538
ErhI CCWWGG 2 cut(s) 384, 778
FaeI CATG 8 cut(s) 153, 254, 280, 353, 562, 574, 746, 869
FatI CATG 8 cut(s) 149, 250, 276, 349, 558, 570, 742, 865
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 9 cut(s) 43, 268, 459, 677, 720, 784, 916, 1035, 1074
FokI GGATG 3 cut(s) 84, 503, 1127
FriOI GRGCYC 1 cut(s) 538
Fsp4HI GCNGC 9 cut(s) 43, 268, 459, 677, 720, 784, 916, 1035, 1074
FspBI CTAG 1 cut(s) 132
FspI TGCGCA 1 cut(s) 734
GlaI GCGC 3 cut(s) 160, 181, 734
GluI GCNGC 9 cut(s) 43, 268, 459, 677, 720, 784, 916, 1035, 1074
GsuI CTGGAG 2 cut(s) 381, 789
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 4 cut(s) 5, 754, 882, 989
HapII CCGG 4 cut(s) 195, 207, 311, 886
HhaI GCGC 3 cut(s) 161, 182, 735
Hin1II CATG 8 cut(s) 153, 254, 280, 353, 562, 574, 746, 869
Hin6I GCGC 3 cut(s) 159, 180, 733
HinP1I GCGC 3 cut(s) 159, 180, 733
HincII GTYRAC 1 cut(s) 129
HindII GTYRAC 1 cut(s) 129
HinfI GANTC 8 cut(s) 19, 70, 198, 323, 584, 622, 766, 1042
HpaI GTTAAC 1 cut(s) 129
HpaII CCGG 4 cut(s) 195, 207, 311, 886
HphI GGTGA 2 cut(s) 196, 785
Hpy166II GTNNAC 4 cut(s) 129, 683, 816, 1020
Hpy188I TCNGA 3 cut(s) 94, 540, 1087
Hpy188III TCNNGA 4 cut(s) 235, 665, 998, 1098
Hpy8I GTNNAC 4 cut(s) 129, 683, 816, 1020
HpyAV CCTTC 2 cut(s) 234, 472
HpyCH4IV ACGT 2 cut(s) 761, 954
HpyCH4V TGCA 9 cut(s) 230, 270, 339, 353, 515, 562, 593, 816, 1073
HpyF10VI GCNNNNNNNGC 4 cut(s) 725, 792, 1073, 1079
HpyF3I CTNAG 6 cut(s) 368, 537, 663, 843, 1008, 1096
HpySE526I ACGT 2 cut(s) 761, 954
Hsp92II CATG 8 cut(s) 153, 254, 280, 353, 562, 574, 746, 869
HspAI GCGC 3 cut(s) 159, 180, 733
Ksp22I TGATCA 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 129
Kzo9I GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
LmnI GCTCC 2 cut(s) 400, 533
Lsp1109I GCAGC 7 cut(s) 54, 254, 688, 731, 795, 927, 1085
LweI GCATC 1 cut(s) 411
MaeI CTAG 1 cut(s) 132
MaeII ACGT 2 cut(s) 761, 954
MaeIII GTNAC 4 cut(s) 134, 658, 773, 854
MalI GATC 7 cut(s) 96, 293, 366, 546, 922, 1002, 1014
MboI GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
MboII GAAGA 3 cut(s) 23, 257, 680
MflI RGATCY 3 cut(s) 291, 364, 920
MhlI GDGCHC 2 cut(s) 538, 818
MlsI TGGCCA 1 cut(s) 882
MluNI TGGCCA 1 cut(s) 882
Mox20I TGGCCA 1 cut(s) 882
MroXI GAANNNNTTC 1 cut(s) 833
MscI TGGCCA 1 cut(s) 882
MseI TTAA 3 cut(s) 128, 297, 617
Msp20I TGGCCA 1 cut(s) 882
MspI CCGG 4 cut(s) 195, 207, 311, 886
MspR9I CCNGG 4 cut(s) 102, 289, 399, 879
MvaI CCWGG 4 cut(s) 102, 289, 399, 879
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 4 cut(s) 725, 792, 1073, 1079
NdeII GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
NlaIII CATG 8 cut(s) 153, 254, 280, 353, 562, 574, 746, 869
NlaIV GGNNCC 1 cut(s) 293
NmeAIII GCCGAG 1 cut(s) 666
NmuCI GTSAC 3 cut(s) 134, 773, 854
NsbI TGCGCA 1 cut(s) 734
NspI RCATGY 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 833
PfeI GAWTC 8 cut(s) 19, 70, 198, 323, 584, 622, 766, 1042
PflFI GACNNNGTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 287
PinAI ACCGGT 1 cut(s) 206
PkrI GCNGC 9 cut(s) 44, 269, 460, 678, 721, 785, 917, 1036, 1075
PshBI ATTAAT 1 cut(s) 617
Psp124BI GAGCTC 1 cut(s) 538
Psp6I CCWGG 4 cut(s) 100, 287, 397, 877
PspEI GGTNACC 1 cut(s) 773
PspGI CCWGG 4 cut(s) 100, 287, 397, 877
PspN4I GGNNCC 1 cut(s) 293
PspPI GGNCC 4 cut(s) 4, 280, 313, 328
PstI CTGCAG 1 cut(s) 517
PstNI CAGNNNCTG 1 cut(s) 1079
PsuI RGATCY 3 cut(s) 291, 364, 920
PsyI GACNNNGTC 1 cut(s) 278
RsaI GTAC 4 cut(s) 211, 526, 598, 964
RsaNI GTAC 4 cut(s) 210, 525, 597, 963
SacI GAGCTC 1 cut(s) 538
SaqAI TTAA 3 cut(s) 128, 297, 617
SatI GCNGC 9 cut(s) 43, 268, 459, 677, 720, 784, 916, 1035, 1074
Sau3AI GATC 7 cut(s) 94, 291, 364, 544, 920, 1000, 1012
Sau96I GGNCC 4 cut(s) 4, 280, 313, 328
ScrFI CCNGG 4 cut(s) 102, 289, 399, 879
SduI GDGCHC 2 cut(s) 538, 818
SfaNI GCATC 1 cut(s) 411
SfcI CTRYAG 1 cut(s) 513
SinI GGWCC 3 cut(s) 280, 313, 328
SmlI CTYRAG 2 cut(s) 1023, 1062
SmoI CTYRAG 2 cut(s) 1023, 1062
SpeI ACTAGT 1 cut(s) 131
SsiI CCGC 2 cut(s) 459, 1035
SspI AATATT 1 cut(s) 833
SspMI CTAG 1 cut(s) 132
SstI GAGCTC 1 cut(s) 538
StyD4I CCNGG 4 cut(s) 100, 287, 397, 877
StyI CCWWGG 2 cut(s) 384, 778
TaiI ACGT 2 cut(s) 764, 957
TaqII GACCGA 1 cut(s) 316
TatI WGTACW 1 cut(s) 962
TauI GCSGC 2 cut(s) 461, 1037
TfiI GAWTC 8 cut(s) 19, 70, 198, 323, 584, 622, 766, 1042
Tru1I TTAA 3 cut(s) 128, 297, 617
Tru9I TTAA 3 cut(s) 128, 297, 617
TscAI CASTG 2 cut(s) 818, 1044
TseFI GTSAC 3 cut(s) 134, 773, 854
TseI GCWGC 7 cut(s) 42, 267, 676, 719, 783, 915, 1073
Tsp45I GTSAC 3 cut(s) 134, 773, 854
TspDTI ATGAA 6 cut(s) 138, 190, 507, 597, 635, 918
TspRI CASTG 2 cut(s) 818, 1044
Tth111I GACNNNGTC 1 cut(s) 278
VneI GTGCAC 1 cut(s) 814
VpaK11BI GGWCC 3 cut(s) 280, 313, 328
VspI ATTAAT 1 cut(s) 617
XapI RAATTY 2 cut(s) 609, 1088
XceI RCATGY 1 cut(s) 254
XmiI GTMKAC 1 cut(s) 1019
XmnI GAANNNNTTC 1 cut(s) 833
XspI CTAG 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.