Rw6G005060
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000106
Physical Location & Seq
Reverse (-)
8293566 .. 8294962
1397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G005060.1

Sequence Viewer

Length: 1074 bp
ATGGTACAGACCAAAGACATATCATCATCCAAAGACATGGAGGAAACAAGCCTCCCTGACCCACTCGTCTTGCATCACTCTGACACACCAGGGCTCATCCTGGTTAACACACCACTTGATGGACACAACTATGGACAATGGAGCCGCGCAATGCGTCTCAGCCTCAGTGCCAAGAACAAGCTTGGACTGATTGATGGAACTATCAAGGCACCTTCATCCACTGATGCCAAATACCCCATGTGGAAGCGCTGCAACGACATGGTGTTGACTTGGATCCTACATTCCATCAACCCTGACATCGCTAGCAGCGTCATATTCTCTGACACAGCAGCTGCGGTTTGGAGCGACCTCAAGGACAGATTTTCCCAAGGAGACAACTCAAGAATTTATCAGATTCGACAAGAAATTGCTGAGTGCCGCCAAGGTCAGCAATCGGTCTCCGTATACTACACCAAACTGAAGGCCCTTTGGGATGAGTTAACCTCTTACCTGGAACCCATTACATGTGAATGTGAAGGTACGAATAAGCTTGCCAATCGAGAAGAAAAGGAGAGAGTTATGCAATTCTTGATGGGGTTAAACGACTCCTACTCCAATGTTCGTGGTTCAATCTTGATGATGAATCCCCTTCCTGACACACGCAAGGCCCATGGCTTGATTCTCCAACAGGAGAGGCAAATGGAGGCAGCAAGCCGGCATGAAAACTTACCAACTTCCCATGCGATGCAAGCTTCACGTTCCCCAGCCACACCGAGTCCTTCCGTTCCCCGCAAACCTCTCAAGTGCACATTTTGCGAACAAGAGGGCCATTTGGTGGAACGTTGCTACTATATTATTGGGTTTCCAGTGGGTCACAAATGGCATGGAAAAAATGTGAAGCCCAAGAACAAGAGGCCAGCTGCTCACAATGTTGAATTGAAAAAGGTACCCACCAATGAAGGTCCAACCTTCACCACTGAGGAATACAATCAAATCATGGCCATGCTACGCAATAAGAACGGTAATGAACAACCACTTGCAAATGCAACAGGACGTGGATACGAAGAAGACGATTGGCCTGGGCAAGCATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

357

Amino Acids

40.31

Weight (kDa)

7.16

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 25 - 71 2.2e-19 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 51 - 229 3e-07 gag-polypeptide of LTR copia-type
Retrotrans_gag PF03732 111 - 194 6.8e-06 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 65
Acc65I GGTACC 1 cut(s) 925
AccB1I GGYRCC 2 cut(s) 208, 925
AccB7I CCANNNNNTGG 2 cut(s) 119, 814
AccI GTMKAC 1 cut(s) 444
AccII CGCG 1 cut(s) 147
AciI CCGC 4 cut(s) 145, 335, 418, 769
AclI AACGTT 1 cut(s) 820
AclWI GGATC 2 cut(s) 268, 281
AcoI YGGCCR 1 cut(s) 978
AcsI RAATTY 1 cut(s) 384
AcuI CTGAAG 1 cut(s) 479
AfaI GTAC 3 cut(s) 6, 520, 927
AfeI AGCGCT 1 cut(s) 248
AfiI CCNNNNNNNGG 2 cut(s) 119, 814
AflIII ACRYGT 1 cut(s) 503
AgsI TTSAA 3 cut(s) 609, 914, 919
AjiI CACGTC 1 cut(s) 1034
AjnI CCWGG 4 cut(s) 88, 99, 489, 1057
AluBI AGCT 5 cut(s) 181, 332, 529, 731, 899
AluI AGCT 5 cut(s) 181, 332, 529, 731, 899
Alw21I GWGCWC 1 cut(s) 788
Alw26I GTCTC 3 cut(s) 161, 366, 442
Alw44I GTGCAC 1 cut(s) 784
AlwI GGATC 2 cut(s) 268, 281
AlwNI CAGNNNCTG 1 cut(s) 332
Aor51HI AGCGCT 1 cut(s) 248
AoxI GGCC 6 cut(s) 462, 645, 805, 893, 978, 1055
ApaLI GTGCAC 1 cut(s) 784
ApeKI GCWGC 6 cut(s) 249, 306, 329, 332, 686, 899
ApoI RAATTY 1 cut(s) 384
Asp718I GGTACC 1 cut(s) 925
AspLEI GCGC 2 cut(s) 149, 249
AspS9I GGNCC 4 cut(s) 463, 646, 805, 941
AsuHPI GGTGA 1 cut(s) 943
AsuNHI GCTAGC 1 cut(s) 302
AvaII GGWCC 1 cut(s) 941
BaeGI GKGCMC 1 cut(s) 788
BalI TGGCCA 1 cut(s) 980
BamHI GGATCC 1 cut(s) 273
BanI GGYRCC 2 cut(s) 208, 925
BanII GRGCYC 1 cut(s) 96
BbsI GAAGAC 1 cut(s) 1053
Bbv12I GWGCWC 1 cut(s) 788
BbvI GCAGC 6 cut(s) 236, 318, 319, 341, 698, 886
BccI CCATC 4 cut(s) 113, 188, 293, 565
BciT130I CCWGG 4 cut(s) 90, 101, 491, 1059
BciVI GTATCC 1 cut(s) 1031
BcoDI GTCTC 3 cut(s) 161, 366, 442
BfaI CTAG 1 cut(s) 303
BfoI RGCGCY 1 cut(s) 250
BfuI GTATCC 1 cut(s) 1031
BisI GCNGC 8 cut(s) 145, 250, 307, 330, 333, 418, 687, 900
BlsI GCNGC 8 cut(s) 146, 251, 308, 331, 334, 419, 688, 901
Bme1390I CCNGG 4 cut(s) 90, 101, 491, 1059
Bme18I GGWCC 1 cut(s) 941
BmgBI CACGTC 1 cut(s) 1034
BmgT120I GGNCC 4 cut(s) 463, 646, 805, 941
BmiI GGNNCC 5 cut(s) 143, 210, 275, 495, 927
BmrFI CCNGG 4 cut(s) 90, 101, 491, 1059
BmsI GCATC 3 cut(s) 82, 214, 714
BmtI GCTAGC 1 cut(s) 306
BpiI GAAGAC 1 cut(s) 1053
BplI GAGNNNNNCTC 2 cut(s) 467, 499
BpuEI CTTGAG 3 cut(s) 335, 364, 764
BsaI GGTCTC 1 cut(s) 442
BsaJI CCNNGG 5 cut(s) 89, 367, 421, 649, 1058
BsaXI ACNNNNNCTCC 2 cut(s) 575, 605
Bsc4I CCNNNNNNNGG 2 cut(s) 119, 814
Bse118I RCCGGY 1 cut(s) 693
Bse1I ACTGG 1 cut(s) 845
Bse3DI GCAATG 1 cut(s) 156
BseBI CCWGG 4 cut(s) 90, 101, 491, 1059
BseDI CCNNGG 5 cut(s) 89, 367, 421, 649, 1058
BseGI GGATG 4 cut(s) 26, 96, 215, 478
BseLI CCNNNNNNNGG 2 cut(s) 119, 814
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 4 cut(s) 172, 178, 402, 948
BseNI ACTGG 1 cut(s) 845
BseSI GKGCMC 1 cut(s) 788
BseXI GCAGC 6 cut(s) 236, 318, 319, 341, 698, 886
BseYI CCCAGC 1 cut(s) 742
Bsh1236I CGCG 1 cut(s) 147
BshFI GGCC 6 cut(s) 464, 647, 807, 895, 980, 1057
BshNI GGYRCC 2 cut(s) 208, 925
BsiHKAI GWGCWC 1 cut(s) 788
BsiSI CCGG 1 cut(s) 694
BslI CCNNNNNNNGG 2 cut(s) 119, 814
BsmAI GTCTC 3 cut(s) 161, 366, 442
BsmBI CGTCTC 1 cut(s) 161
BsnI GGCC 6 cut(s) 464, 647, 807, 895, 980, 1057
Bso31I GGTCTC 1 cut(s) 442
Bsp1286I GDGCHC 2 cut(s) 96, 788
Bsp143I GATC 1 cut(s) 273
Bsp19I CCATGG 1 cut(s) 649
BspACI CCGC 4 cut(s) 145, 335, 418, 769
BspANI GGCC 6 cut(s) 464, 647, 807, 895, 980, 1057
BspCNI CTCAG 4 cut(s) 171, 177, 403, 949
BspFNI CGCG 1 cut(s) 147
BspLI GGNNCC 5 cut(s) 143, 210, 275, 495, 927
BspOI GCTAGC 1 cut(s) 306
BspPI GGATC 2 cut(s) 268, 281
BspT107I GGYRCC 2 cut(s) 208, 925
BspTNI GGTCTC 1 cut(s) 442
BsrDI GCAATG 1 cut(s) 156
BsrFI RCCGGY 1 cut(s) 693
BsrI ACTGG 1 cut(s) 845
BssAI RCCGGY 1 cut(s) 693
BssECI CCNNGG 5 cut(s) 89, 367, 421, 649, 1058
BssMI GATC 1 cut(s) 273
BssNAI GTATAC 1 cut(s) 445
BssT1I CCWWGG 3 cut(s) 367, 421, 649
Bst1107I GTATAC 1 cut(s) 445
Bst2UI CCWGG 4 cut(s) 90, 101, 491, 1059
Bst4CI ACNGT 1 cut(s) 1001
BstAPI GCANNNNNTGC 1 cut(s) 792
BstC8I GCNNGC 7 cut(s) 304, 531, 691, 695, 729, 897, 1065
BstDEI CTNAG 4 cut(s) 158, 164, 411, 957
BstDSI CCRYGG 1 cut(s) 649
BstF5I GGATG 4 cut(s) 26, 96, 215, 478
BstFNI CGCG 1 cut(s) 147
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 2 cut(s) 149, 249
BstKTI GATC 1 cut(s) 276
BstMAI GTCTC 3 cut(s) 161, 366, 442
BstMBI GATC 1 cut(s) 273
BstMWI GCNNNNNNNGC 2 cut(s) 728, 792
BstNI CCWGG 4 cut(s) 90, 101, 491, 1059
BstNSI RCATGY 1 cut(s) 507
BstSCI CCNGG 4 cut(s) 88, 99, 489, 1057
BstSLI GKGCMC 1 cut(s) 788
BstUI CGCG 1 cut(s) 147
BstV1I GCAGC 6 cut(s) 236, 318, 319, 341, 698, 886
BstV2I GAAGAC 1 cut(s) 1053
BstX2I RGATCY 1 cut(s) 273
BstXI CCANNNNNNTGG 1 cut(s) 37
BstYI RGATCY 1 cut(s) 273
BstZ17I GTATAC 1 cut(s) 445
BsuI GTATCC 1 cut(s) 1031
BsuRI GGCC 6 cut(s) 464, 647, 807, 895, 980, 1057
BtgI CCRYGG 1 cut(s) 649
BtgZI GCGATG 2 cut(s) 283, 737
BtrI CACGTC 1 cut(s) 1034
BtsCI GGATG 4 cut(s) 26, 96, 215, 478
BtsIMutI CAGTG 4 cut(s) 172, 219, 852, 954
Cac8I GCNNGC 7 cut(s) 304, 531, 691, 695, 729, 897, 1065
CaiI CAGNNNCTG 1 cut(s) 332
CfoI GCGC 2 cut(s) 149, 249
Cfr10I RCCGGY 1 cut(s) 693
Cfr13I GGNCC 4 cut(s) 463, 646, 805, 941
CseI GACGC 2 cut(s) 143, 298
Csp6I GTAC 3 cut(s) 5, 519, 926
CspCI CAANNNNNGTGG 4 cut(s) 51, 86, 583, 618
CviQI GTAC 3 cut(s) 5, 519, 926
DdeI CTNAG 4 cut(s) 158, 164, 411, 957
DpnI GATC 1 cut(s) 275
DpnII GATC 1 cut(s) 273
DrdI GACNNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 978
Eco130I CCWWGG 3 cut(s) 367, 421, 649
Eco24I GRGCYC 1 cut(s) 96
Eco31I GGTCTC 1 cut(s) 442
Eco47I GGWCC 1 cut(s) 941
Eco47III AGCGCT 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 479
EcoO109I RGGNCCY 1 cut(s) 463
EcoRII CCWGG 4 cut(s) 88, 99, 489, 1057
EcoT14I CCWWGG 3 cut(s) 367, 421, 649
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 3 cut(s) 367, 421, 649
Esp3I CGTCTC 1 cut(s) 161
FauI CCCGC 1 cut(s) 776
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 8 cut(s) 145, 250, 307, 330, 333, 418, 687, 900
FokI GGATG 4 cut(s) 13, 83, 202, 485
FriOI GRGCYC 1 cut(s) 96
Fsp4HI GCNGC 8 cut(s) 145, 250, 307, 330, 333, 418, 687, 900
FspBI CTAG 1 cut(s) 303
GlaI GCGC 2 cut(s) 148, 248
GluI GCNGC 8 cut(s) 145, 250, 307, 330, 333, 418, 687, 900
GsaI CCCAGC 1 cut(s) 746
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 6 cut(s) 464, 647, 807, 895, 980, 1057
HapII CCGG 1 cut(s) 694
HgaI GACGC 2 cut(s) 143, 298
HhaI GCGC 2 cut(s) 149, 249
Hin6I GCGC 2 cut(s) 147, 247
HinP1I GCGC 2 cut(s) 147, 247
HincII GTYRAC 3 cut(s) 106, 267, 480
HindII GTYRAC 3 cut(s) 106, 267, 480
HindIII AAGCTT 3 cut(s) 179, 527, 729
HinfI GANTC 5 cut(s) 394, 584, 622, 658, 754
HpaI GTTAAC 2 cut(s) 106, 480
HpaII CCGG 1 cut(s) 694
HphI GGTGA 1 cut(s) 943
Hpy166II GTNNAC 5 cut(s) 106, 267, 445, 480, 786
Hpy188I TCNGA 3 cut(s) 82, 322, 393
Hpy188III TCNNGA 5 cut(s) 381, 539, 568, 613, 632
Hpy8I GTNNAC 5 cut(s) 106, 267, 445, 480, 786
HpyAV CCTTC 7 cut(s) 222, 454, 509, 638, 768, 932, 958
HpyCH4III ACNGT 1 cut(s) 1001
HpyCH4IV ACGT 3 cut(s) 736, 820, 1033
HpyCH4V TGCA 7 cut(s) 73, 252, 562, 727, 786, 1019, 1025
HpyF10VI GCNNNNNNNGC 2 cut(s) 728, 792
HpyF3I CTNAG 4 cut(s) 158, 164, 411, 957
HpySE526I ACGT 3 cut(s) 736, 820, 1033
HspAI GCGC 2 cut(s) 147, 247
KpnI GGTACC 1 cut(s) 929
KroI GCCGGC 1 cut(s) 693
KroNI GCCGGC 1 cut(s) 695
KspAI GTTAAC 2 cut(s) 106, 480
Kzo9I GATC 1 cut(s) 273
LmnI GCTCC 2 cut(s) 141, 342
Lsp1109I GCAGC 6 cut(s) 236, 318, 319, 341, 698, 886
LweI GCATC 3 cut(s) 82, 214, 714
MaeI CTAG 1 cut(s) 303
MaeII ACGT 3 cut(s) 736, 820, 1033
MaeIII GTNAC 1 cut(s) 851
MalI GATC 1 cut(s) 275
MboI GATC 1 cut(s) 273
MboII GAAGA 3 cut(s) 554, 1055, 1058
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 2 cut(s) 96, 788
MlsI TGGCCA 1 cut(s) 980
MluCI AATT 4 cut(s) 384, 405, 563, 914
MluNI TGGCCA 1 cut(s) 980
MlyI GAGTC 2 cut(s) 578, 763
MmeI TCCRAC 2 cut(s) 688, 968
Mox20I TGGCCA 1 cut(s) 980
MroNI GCCGGC 1 cut(s) 693
MscI TGGCCA 1 cut(s) 980
MseI TTAA 4 cut(s) 105, 479, 578, 1072
MslI CAYNNNNRTG 3 cut(s) 129, 508, 980
Msp20I TGGCCA 1 cut(s) 980
MspA1I CMGCKG 2 cut(s) 332, 899
MspI CCGG 1 cut(s) 694
MspR9I CCNGG 4 cut(s) 90, 101, 491, 1059
MvaI CCWGG 4 cut(s) 90, 101, 491, 1059
MvnI CGCG 1 cut(s) 147
MwoI GCNNNNNNNGC 2 cut(s) 728, 792
NaeI GCCGGC 1 cut(s) 695
NcoI CCATGG 1 cut(s) 649
NdeII GATC 1 cut(s) 273
NgoMIV GCCGGC 1 cut(s) 693
NheI GCTAGC 1 cut(s) 302
NlaIV GGNNCC 5 cut(s) 143, 210, 275, 495, 927
NmuCI GTSAC 1 cut(s) 851
NspI RCATGY 1 cut(s) 507
PciI ACATGT 1 cut(s) 503
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 1047
PdiI GCCGGC 1 cut(s) 695
PfeI GAWTC 3 cut(s) 394, 622, 658
PflMI CCANNNNNTGG 2 cut(s) 119, 814
PkrI GCNGC 8 cut(s) 146, 251, 308, 331, 334, 419, 688, 901
PleI GAGTC 2 cut(s) 578, 762
PpsI GAGTC 2 cut(s) 578, 762
PscI ACATGT 1 cut(s) 503
Psp1406I AACGTT 1 cut(s) 820
Psp6I CCWGG 4 cut(s) 88, 99, 489, 1057
PspFI CCCAGC 1 cut(s) 742
PspGI CCWGG 4 cut(s) 88, 99, 489, 1057
PspN4I GGNNCC 5 cut(s) 143, 210, 275, 495, 927
PspPI GGNCC 4 cut(s) 463, 646, 805, 941
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 1 cut(s) 273
PvuII CAGCTG 2 cut(s) 332, 899
RsaI GTAC 3 cut(s) 6, 520, 927
RsaNI GTAC 3 cut(s) 5, 519, 926
RseI CAYNNNNRTG 3 cut(s) 129, 508, 980
SaqAI TTAA 4 cut(s) 105, 479, 578, 1072
SatI GCNGC 8 cut(s) 145, 250, 307, 330, 333, 418, 687, 900
Sau3AI GATC 1 cut(s) 273
Sau96I GGNCC 4 cut(s) 463, 646, 805, 941
SchI GAGTC 2 cut(s) 578, 763
ScrFI CCNGG 4 cut(s) 90, 101, 491, 1059
SduI GDGCHC 2 cut(s) 96, 788
SfaNI GCATC 3 cut(s) 82, 214, 714
SinI GGWCC 1 cut(s) 941
SmiMI CAYNNNNRTG 3 cut(s) 129, 508, 980
SmlI CTYRAG 3 cut(s) 350, 379, 779
SmoI CTYRAG 3 cut(s) 350, 379, 779
Sse9I AATT 4 cut(s) 384, 405, 563, 914
SsiI CCGC 4 cut(s) 145, 335, 418, 769
SspMI CTAG 1 cut(s) 303
StyD4I CCNGG 4 cut(s) 88, 99, 489, 1057
StyI CCWWGG 3 cut(s) 367, 421, 649
TaaI ACNGT 1 cut(s) 1001
TaiI ACGT 3 cut(s) 739, 823, 1036
TaqI TCGA 2 cut(s) 397, 538
TaqII GACCGA 1 cut(s) 424
TasI AATT 4 cut(s) 384, 405, 563, 914
TauI GCSGC 2 cut(s) 147, 420
TfiI GAWTC 3 cut(s) 394, 622, 658
Tru1I TTAA 4 cut(s) 105, 479, 578, 1072
Tru9I TTAA 4 cut(s) 105, 479, 578, 1072
TscAI CASTG 4 cut(s) 172, 226, 852, 961
TseFI GTSAC 1 cut(s) 851
TseI GCWGC 6 cut(s) 249, 306, 329, 332, 686, 899
Tsp45I GTSAC 1 cut(s) 851
TspDTI ATGAA 5 cut(s) 204, 635, 714, 951, 1020
TspGWI ACGGA 2 cut(s) 430, 751
TspRI CASTG 4 cut(s) 172, 226, 852, 961
Van91I CCANNNNNTGG 2 cut(s) 119, 814
VneI GTGCAC 1 cut(s) 784
VpaK11BI GGWCC 1 cut(s) 941
XapI RAATTY 1 cut(s) 384
XceI RCATGY 1 cut(s) 507
XmiI GTMKAC 1 cut(s) 444
XspI CTAG 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.