gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 520 |
| AciI | CCGC | 1 cut(s) | 524 |
| AclWI | GGATC | 1 cut(s) | 135 |
| AcsI | RAATTY | 4 cut(s) | 16, 43, 265, 438 |
| AgsI | TTSAA | 4 cut(s) | 15, 32, 41, 248 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 221, 253, 268, 300 |
| AluBI | AGCT | 1 cut(s) | 308 |
| AluI | AGCT | 1 cut(s) | 308 |
| AlwI | GGATC | 1 cut(s) | 135 |
| ApeKI | GCWGC | 2 cut(s) | 548, 575 |
| ApoI | RAATTY | 4 cut(s) | 16, 43, 265, 438 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 451, 483 |
| AseI | ATTAAT | 1 cut(s) | 398 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 36 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| BbvI | GCAGC | 2 cut(s) | 560, 562 |
| BccI | CCATC | 3 cut(s) | 56, 134, 365 |
| BciVI | GTATCC | 1 cut(s) | 469 |
| BfuI | GTATCC | 1 cut(s) | 469 |
| BglII | AGATCT | 2 cut(s) | 118, 568 |
| BisI | GCNGC | 2 cut(s) | 549, 576 |
| BlsI | GCNGC | 2 cut(s) | 550, 577 |
| BmiI | GGNNCC | 2 cut(s) | 86, 153 |
| BmsI | GCATC | 2 cut(s) | 14, 214 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| BpuEI | CTTGAG | 1 cut(s) | 99 |
| BsaAI | YACGTR | 1 cut(s) | 515 |
| BsaBI | GATNNNNATC | 1 cut(s) | 356 |
| BsaJI | CCNNGG | 2 cut(s) | 228, 334 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 398, 428, 570 |
| Bse8I | GATNNNNATC | 1 cut(s) | 356 |
| BseDI | CCNNGG | 2 cut(s) | 228, 334 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseJI | GATNNNNATC | 1 cut(s) | 356 |
| BseXI | GCAGC | 2 cut(s) | 560, 562 |
| BsgI | GTGCAG | 1 cut(s) | 561 |
| BsiSI | CCGG | 1 cut(s) | 155 |
| Bsp143I | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| BspACI | CCGC | 1 cut(s) | 524 |
| BspLI | GGNNCC | 2 cut(s) | 86, 153 |
| BspPI | GGATC | 1 cut(s) | 135 |
| BssECI | CCNNGG | 2 cut(s) | 228, 334 |
| BssMI | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| BssT1I | CCWWGG | 2 cut(s) | 228, 334 |
| BstBAI | YACGTR | 1 cut(s) | 515 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 5 cut(s) | 121, 130, 354, 538, 571 |
| BstMBI | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| BstSNI | TACGTA | 1 cut(s) | 515 |
| BstV1I | GCAGC | 2 cut(s) | 560, 562 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BstX2I | RGATCY | 3 cut(s) | 118, 127, 568 |
| BstYI | RGATCY | 3 cut(s) | 118, 127, 568 |
| BsuI | GTATCC | 1 cut(s) | 469 |
| BtgZI | GCGATG | 1 cut(s) | 237 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 356, 391 |
| CviAII | CATG | 3 cut(s) | 470, 539, 590 |
| CviJI | RGCY | 3 cut(s) | 87, 233, 308 |
| CviKI_1 | RGCY | 3 cut(s) | 87, 233, 308 |
| DpnI | GATC | 5 cut(s) | 120, 129, 353, 537, 570 |
| DpnII | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| Eco105I | TACGTA | 1 cut(s) | 515 |
| Eco130I | CCWWGG | 2 cut(s) | 228, 334 |
| EcoT14I | CCWWGG | 2 cut(s) | 228, 334 |
| ErhI | CCWWGG | 2 cut(s) | 228, 334 |
| FaeI | CATG | 3 cut(s) | 473, 542, 593 |
| FaiI | YATR | 5 cut(s) | 75, 471, 487, 540, 591 |
| FatI | CATG | 3 cut(s) | 469, 538, 589 |
| FblI | GTMKAC | 1 cut(s) | 520 |
| Fnu4HI | GCNGC | 2 cut(s) | 549, 576 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 2 cut(s) | 549, 576 |
| GluI | GCNGC | 2 cut(s) | 549, 576 |
| HapII | CCGG | 1 cut(s) | 155 |
| Hin1II | CATG | 3 cut(s) | 473, 542, 593 |
| HincII | GTYRAC | 1 cut(s) | 454 |
| HindII | GTYRAC | 1 cut(s) | 454 |
| HindIII | AAGCTT | 1 cut(s) | 306 |
| HinfI | GANTC | 2 cut(s) | 188, 413 |
| HpaI | GTTAAC | 1 cut(s) | 454 |
| HpaII | CCGG | 1 cut(s) | 155 |
| Hpy166II | GTNNAC | 3 cut(s) | 341, 454, 521 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 444 |
| Hpy8I | GTNNAC | 3 cut(s) | 341, 454, 521 |
| HpyAV | CCTTC | 1 cut(s) | 397 |
| HpyCH4IV | ACGT | 1 cut(s) | 514 |
| HpyCH4V | TGCA | 3 cut(s) | 290, 548, 578 |
| HpySE526I | ACGT | 1 cut(s) | 514 |
| Hsp92II | CATG | 3 cut(s) | 473, 542, 593 |
| KspAI | GTTAAC | 1 cut(s) | 454 |
| Kzo9I | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| LmnI | GCTCC | 2 cut(s) | 84, 591 |
| LpnPI | CCDG | 4 cut(s) | 168, 236, 407, 429 |
| Lsp1109I | GCAGC | 2 cut(s) | 560, 562 |
| LweI | GCATC | 2 cut(s) | 14, 214 |
| MaeII | ACGT | 1 cut(s) | 514 |
| MaeIII | GTNAC | 1 cut(s) | 143 |
| MalI | GATC | 5 cut(s) | 120, 129, 353, 537, 570 |
| MboI | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| MboII | GAAGA | 3 cut(s) | 109, 149, 421 |
| MflI | RGATCY | 3 cut(s) | 118, 127, 568 |
| MlyI | GAGTC | 1 cut(s) | 422 |
| MnlI | CCTC | 2 cut(s) | 31, 142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 36 |
| MseI | TTAA | 4 cut(s) | 47, 204, 398, 453 |
| MspI | CCGG | 1 cut(s) | 155 |
| NdeII | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| NlaIII | CATG | 3 cut(s) | 473, 542, 593 |
| NlaIV | GGNNCC | 2 cut(s) | 86, 153 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 176 |
| PdmI | GAANNNNTTC | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 188 |
| PkrI | GCNGC | 2 cut(s) | 550, 577 |
| PleI | GAGTC | 1 cut(s) | 421 |
| PpsI | GAGTC | 1 cut(s) | 421 |
| Ppu21I | YACGTR | 1 cut(s) | 515 |
| PshBI | ATTAAT | 1 cut(s) | 398 |
| PspN4I | GGNNCC | 2 cut(s) | 86, 153 |
| PsuI | RGATCY | 3 cut(s) | 118, 127, 568 |
| SaqAI | TTAA | 4 cut(s) | 47, 204, 398, 453 |
| SatI | GCNGC | 2 cut(s) | 549, 576 |
| Sau3AI | GATC | 5 cut(s) | 118, 127, 351, 535, 568 |
| SchI | GAGTC | 1 cut(s) | 422 |
| SetI | ASST | 5 cut(s) | 104, 310, 340, 426, 517 |
| SfaNI | GCATC | 2 cut(s) | 14, 214 |
| SmlI | CTYRAG | 1 cut(s) | 114 |
| SmoI | CTYRAG | 1 cut(s) | 114 |
| SnaBI | TACGTA | 1 cut(s) | 515 |
| SsiI | CCGC | 1 cut(s) | 524 |
| SspI | AATATT | 2 cut(s) | 37, 80 |
| StyI | CCWWGG | 2 cut(s) | 228, 334 |
| TaiI | ACGT | 1 cut(s) | 517 |
| TaqI | TCGA | 1 cut(s) | 534 |
| TfiI | GAWTC | 1 cut(s) | 188 |
| Tru1I | TTAA | 4 cut(s) | 47, 204, 398, 453 |
| Tru9I | TTAA | 4 cut(s) | 47, 204, 398, 453 |
| TseI | GCWGC | 2 cut(s) | 548, 575 |
| TspDTI | ATGAA | 4 cut(s) | 90, 97, 110, 416 |
| VspI | ATTAAT | 1 cut(s) | 398 |
| XapI | RAATTY | 4 cut(s) | 16, 43, 265, 438 |
| XmiI | GTMKAC | 1 cut(s) | 520 |
| XmnI | GAANNNNTTC | 1 cut(s) | 36 |