MD15G1218200.v1.1

Flavonoid 3'-monooxygenase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
17570930 .. 17576611
5682 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1218200.v1.1.491

Sequence Viewer

Length: 867 bp
ATGGTGGCCTTACTGATGCAGCTGGCTGAAGATCCTGATATTGAAGTTAAGCTCAACTTTGACAGTGTCAAGGGATTCACCCAGTTTAAAGCTACTGTTGAATTGCAAAGTGGCTATAAATTGAAGAAATTAAGAAGTGATAAAGGGGGAGAGTACATATCGATTGAGTTTAACAGGTTTTATGAAGAAATTGGAATAGAAAGACAACTCATAGTGGCATACTCACTACAACATAATGGTGTGGTTGAAAGAAAGAATAGAACCATTGTGGAGATGGCTAAGTGTATGATGTTTGAGAAGAAGATACCACTGGAATTTTGGGCTGAGCCAATTAACACTGCAGTATATGTTTTAAACAGATGCCCAACTAAGGCTTTGGACAAGAAAACCCCTTTTGAAGCCTATAGTGGAAGAAAGCCAGGGATTAAGCATTTGAGGATGGACCCAGTGGCAGTCATGTTAGTACCACATCTAGCCCTTGAAGATTGCAATGTCACAGGTTATGATATTTGCAAAGGAACTACGGTTTTAATAAACACATGGAGTATGGGGAGAGACCCTGCACAGTGGAATGCACCAGAAGAGTTTAAACCAGATAGGTTCCTAGGGAAGGCAATTGATGTGAAGGGACATAATTTTGAGCTGCTGCCTTTTGGTTCGGGAAGGAGGAGGTGCCCTGGTTATAGCCTTGGACTTAAAATGATTAGGTCTAGCTTGGCTAACTTGTTGCATGGATTCAACTGGAAGTTACCTGACAATATTACAACAAAAGATTTGAGCATGGAGGAAGTTTTTGGATTGGCTACGCCTCGGAAGTTCCCGCTTGTTGCAATTTTGGAACCTCAGCTCCCACTCCATCTTTATTAG

Protein Analysis

289

Amino Acids

32.82

Weight (kDa)

8.82

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 145 - 268 4.3e-34 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 672
AciI CCGC 1 cut(s) 821
AclWI GGATC 1 cut(s) 26
AcsI RAATTY 1 cut(s) 314
AcuI CTGAAG 1 cut(s) 48
AfaI GTAC 2 cut(s) 155, 465
AfiI CCNNNNNNNGG 2 cut(s) 370, 610
AgsI TTSAA 7 cut(s) 44, 101, 124, 248, 398, 482, 739
AjnI CCWGG 2 cut(s) 418, 676
AloI GAACNNNNNNTCC 2 cut(s) 831, 863
AluBI AGCT 6 cut(s) 22, 52, 92, 643, 714, 847
AluI AGCT 6 cut(s) 22, 52, 92, 643, 714, 847
Alw26I GTCTC 1 cut(s) 549
AlwI GGATC 1 cut(s) 26
AoxI GGCC 1 cut(s) 6
ApeKI GCWGC 3 cut(s) 19, 643, 646
ApoI RAATTY 1 cut(s) 314
AspA2I CCTAGG 1 cut(s) 604
AspS9I GGNCC 1 cut(s) 442
AsuHPI GGTGA 1 cut(s) 70
AvaII GGWCC 1 cut(s) 442
AvrII CCTAGG 1 cut(s) 604
BaeGI GKGCMC 1 cut(s) 677
BanI GGYRCC 1 cut(s) 672
BbvCI CCTCAGC 1 cut(s) 843
BbvI GCAGC 3 cut(s) 31, 630, 633
BccI CCATC 3 cut(s) 268, 433, 864
BciT130I CCWGG 2 cut(s) 420, 678
BcoDI GTCTC 1 cut(s) 549
BfaI CTAG 3 cut(s) 473, 605, 711
BfmI CTRYAG 2 cut(s) 339, 403
BisI GCNGC 3 cut(s) 20, 644, 647
BlnI CCTAGG 1 cut(s) 604
BlpI GCTNAGC 1 cut(s) 324
BlsI GCNGC 3 cut(s) 21, 645, 648
Bme1390I CCNGG 2 cut(s) 420, 678
Bme18I GGWCC 1 cut(s) 442
BmgT120I GGNCC 1 cut(s) 442
BmiI GGNNCC 4 cut(s) 444, 602, 674, 840
BmrFI CCNGG 2 cut(s) 420, 678
BmrI ACTGGG 2 cut(s) 76, 440
BmsI GCATC 2 cut(s) 6, 350
BmuI ACTGGG 2 cut(s) 76, 440
Bpu10I CCTNAGC 1 cut(s) 843
Bpu1102I GCTNAGC 1 cut(s) 324
Bsa29I ATCGAT 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 549
BsaJI CCNNGG 5 cut(s) 419, 604, 676, 688, 809
BsaXI ACNNNNNCTCC 2 cut(s) 831, 861
Bsc4I CCNNNNNNNGG 2 cut(s) 370, 610
Bse1I ACTGG 4 cut(s) 82, 315, 446, 746
Bse3DI GCAATG 1 cut(s) 496
BseBI CCWGG 2 cut(s) 420, 678
BseCI ATCGAT 1 cut(s) 161
BseDI CCNNGG 5 cut(s) 419, 604, 676, 688, 809
BseGI GGATG 1 cut(s) 444
BseLI CCNNNNNNNGG 2 cut(s) 370, 610
BseMI GCAATG 1 cut(s) 496
BseMII CTCAG 2 cut(s) 315, 857
BseNI ACTGG 4 cut(s) 82, 315, 446, 746
BseRI GAGGAG 1 cut(s) 682
BseSI GKGCMC 1 cut(s) 677
BseXI GCAGC 3 cut(s) 31, 630, 633
BsgI GTGCAG 1 cut(s) 546
BshFI GGCC 1 cut(s) 8
BshNI GGYRCC 1 cut(s) 672
BshVI ATCGAT 1 cut(s) 161
BslFI GGGAC 1 cut(s) 642
BslI CCNNNNNNNGG 2 cut(s) 370, 610
BsmAI GTCTC 1 cut(s) 549
BsmFI GGGAC 1 cut(s) 642
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 1 cut(s) 8
Bso31I GGTCTC 1 cut(s) 549
Bsp1286I GDGCHC 1 cut(s) 677
Bsp143I GATC 1 cut(s) 31
Bsp1720I GCTNAGC 1 cut(s) 324
BspACI CCGC 1 cut(s) 821
BspANI GGCC 1 cut(s) 8
BspCNI CTCAG 2 cut(s) 316, 856
BspDI ATCGAT 1 cut(s) 161
BspLI GGNNCC 4 cut(s) 444, 602, 674, 840
BspMAI CTGCAG 1 cut(s) 343
BspPI GGATC 1 cut(s) 26
BspT107I GGYRCC 1 cut(s) 672
BspTNI GGTCTC 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 496
BsrI ACTGG 4 cut(s) 82, 315, 446, 746
BssECI CCNNGG 5 cut(s) 419, 604, 676, 688, 809
BssMI GATC 1 cut(s) 31
BssT1I CCWWGG 2 cut(s) 604, 688
Bst2UI CCWGG 2 cut(s) 420, 678
Bst4CI ACNGT 4 cut(s) 65, 97, 526, 567
Bst6I CTCTTC 1 cut(s) 576
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 4 cut(s) 279, 324, 369, 843
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 1 cut(s) 444
BstKTI GATC 1 cut(s) 34
BstMAI GTCTC 1 cut(s) 549
BstMBI GATC 1 cut(s) 31
BstNI CCWGG 2 cut(s) 420, 678
BstSCI CCNGG 2 cut(s) 418, 676
BstSFI CTRYAG 2 cut(s) 339, 403
BstSLI GKGCMC 1 cut(s) 677
BstV1I GCAGC 3 cut(s) 31, 630, 633
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
Bsu15I ATCGAT 1 cut(s) 161
BsuRI GGCC 1 cut(s) 8
BsuTUI ATCGAT 1 cut(s) 161
BtsCI GGATG 1 cut(s) 444
BtsI GCAGTG 1 cut(s) 336
BtsIMutI CAGTG 5 cut(s) 70, 308, 336, 453, 572
Cac8I GCNNGC 1 cut(s) 24
Cfr13I GGNCC 1 cut(s) 442
ClaI ATCGAT 1 cut(s) 161
Csp6I GTAC 2 cut(s) 154, 464
CviAII CATG 4 cut(s) 457, 540, 731, 781
CviQI GTAC 2 cut(s) 154, 464
DdeI CTNAG 4 cut(s) 279, 324, 369, 843
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
DraI TTTAAA 3 cut(s) 88, 354, 589
Eam1104I CTCTTC 1 cut(s) 576
EarI CTCTTC 1 cut(s) 576
Eco130I CCWWGG 2 cut(s) 604, 688
Eco31I GGTCTC 1 cut(s) 549
Eco47I GGWCC 1 cut(s) 442
Eco57I CTGAAG 1 cut(s) 48
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 418, 676
EcoT14I CCWWGG 2 cut(s) 604, 688
ErhI CCWWGG 2 cut(s) 604, 688
FaeI CATG 4 cut(s) 460, 543, 734, 784
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 1 cut(s) 642
FatI CATG 4 cut(s) 456, 539, 730, 780
FauI CCCGC 1 cut(s) 828
Fnu4HI GCNGC 3 cut(s) 20, 644, 647
FokI GGATG 1 cut(s) 451
Fsp4HI GCNGC 3 cut(s) 20, 644, 647
FspBI CTAG 3 cut(s) 473, 605, 711
GluI GCNGC 3 cut(s) 20, 644, 647
HaeIII GGCC 1 cut(s) 8
Hin1II CATG 4 cut(s) 460, 543, 734, 784
HinfI GANTC 2 cut(s) 75, 735
HphI GGTGA 1 cut(s) 70
Hpy188I TCNGA 1 cut(s) 813
Hpy188III TCNNGA 2 cut(s) 35, 660
HpyAV CCTTC 3 cut(s) 604, 619, 657
HpyCH4III ACNGT 4 cut(s) 65, 97, 526, 567
HpyCH4V TGCA 9 cut(s) 19, 106, 341, 489, 513, 563, 575, 730, 830
HpyF3I CTNAG 4 cut(s) 279, 324, 369, 843
Hsp92II CATG 4 cut(s) 460, 543, 734, 784
Kzo9I GATC 1 cut(s) 31
LmnI GCTCC 1 cut(s) 852
Lsp1109I GCAGC 3 cut(s) 31, 630, 633
LweI GCATC 2 cut(s) 6, 350
MaeI CTAG 3 cut(s) 473, 605, 711
MaeIII GTNAC 2 cut(s) 493, 747
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MboII GAAGA 8 cut(s) 41, 136, 197, 310, 313, 423, 494, 593
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 1 cut(s) 677
MluCI AATT 9 cut(s) 101, 119, 128, 189, 314, 330, 615, 634, 831
MnlI CCTC 6 cut(s) 429, 660, 663, 778, 819, 852
MslI CAYNNNNRTG 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 22
MspR9I CCNGG 2 cut(s) 420, 678
MssI GTTTAAAC 1 cut(s) 589
MunI CAATTG 1 cut(s) 615
Mva1269I GAATGC 1 cut(s) 577
MvaI CCWGG 2 cut(s) 420, 678
NdeII GATC 1 cut(s) 31
NlaIII CATG 4 cut(s) 460, 543, 734, 784
NlaIV GGNNCC 4 cut(s) 444, 602, 674, 840
NmuCI GTSAC 1 cut(s) 493
PctI GAATGC 1 cut(s) 577
PfeI GAWTC 2 cut(s) 75, 735
PflFI GACNNNGTC 1 cut(s) 65
PkrI GCNGC 3 cut(s) 21, 645, 648
PmeI GTTTAAAC 1 cut(s) 589
Psp6I CCWGG 2 cut(s) 418, 676
PspGI CCWGG 2 cut(s) 418, 676
PspN4I GGNNCC 4 cut(s) 444, 602, 674, 840
PspPI GGNCC 1 cut(s) 442
PstI CTGCAG 1 cut(s) 343
PsuI RGATCY 1 cut(s) 31
PsyI GACNNNGTC 1 cut(s) 65
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 155, 465
RsaNI GTAC 2 cut(s) 154, 464
RseI CAYNNNNRTG 1 cut(s) 237
SatI GCNGC 3 cut(s) 20, 644, 647
Sau3AI GATC 1 cut(s) 31
Sau96I GGNCC 1 cut(s) 442
ScrFI CCNGG 2 cut(s) 420, 678
SduI GDGCHC 1 cut(s) 677
SfaNI GCATC 2 cut(s) 6, 350
SfcI CTRYAG 2 cut(s) 339, 403
SinI GGWCC 1 cut(s) 442
SmiMI CAYNNNNRTG 1 cut(s) 237
Sse9I AATT 9 cut(s) 101, 119, 128, 189, 314, 330, 615, 634, 831
SsiI CCGC 1 cut(s) 821
SspI AATATT 1 cut(s) 760
SspMI CTAG 3 cut(s) 473, 605, 711
StyD4I CCNGG 2 cut(s) 418, 676
StyI CCWWGG 2 cut(s) 604, 688
TaaI ACNGT 4 cut(s) 65, 97, 526, 567
TaqI TCGA 1 cut(s) 161
TasI AATT 9 cut(s) 101, 119, 128, 189, 314, 330, 615, 634, 831
TatI WGTACW 1 cut(s) 153
TfiI GAWTC 2 cut(s) 75, 735
TscAI CASTG 5 cut(s) 70, 315, 343, 453, 572
TseFI GTSAC 1 cut(s) 493
TseI GCWGC 3 cut(s) 19, 643, 646
Tsp45I GTSAC 1 cut(s) 493
TspDTI ATGAA 1 cut(s) 198
TspRI CASTG 5 cut(s) 70, 315, 343, 453, 572
Tth111I GACNNNGTC 1 cut(s) 65
VpaK11BI GGWCC 1 cut(s) 442
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 1 cut(s) 314
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 315
XmaJI CCTAGG 1 cut(s) 604
XspI CTAG 3 cut(s) 473, 605, 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.