gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 48, 194 |
| AcuI | CTGAAG | 1 cut(s) | 197 |
| AfaI | GTAC | 1 cut(s) | 150 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 209 |
| AjnI | CCWGG | 1 cut(s) | 73 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 1 cut(s) | 284 |
| Alw26I | GTCTC | 2 cut(s) | 133, 209 |
| Alw44I | GTGCAC | 1 cut(s) | 280 |
| AlwI | GGATC | 2 cut(s) | 48, 194 |
| AoxI | GGCC | 1 cut(s) | 99 |
| ApaLI | GTGCAC | 1 cut(s) | 280 |
| ApeKI | GCWGC | 2 cut(s) | 161, 164 |
| AspS9I | GGNCC | 1 cut(s) | 100 |
| AsuHPI | GGTGA | 1 cut(s) | 224 |
| BaeGI | GKGCMC | 1 cut(s) | 284 |
| Bbv12I | GWGCWC | 1 cut(s) | 284 |
| BbvI | GCAGC | 2 cut(s) | 151, 173 |
| BciT130I | CCWGG | 1 cut(s) | 75 |
| BcoDI | GTCTC | 2 cut(s) | 133, 209 |
| BfaI | CTAG | 1 cut(s) | 295 |
| BisI | GCNGC | 2 cut(s) | 162, 165 |
| BlsI | GCNGC | 2 cut(s) | 163, 166 |
| Bme1390I | CCNGG | 1 cut(s) | 75 |
| BmgT120I | GGNCC | 1 cut(s) | 100 |
| BmrFI | CCNGG | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 1 cut(s) | 260 |
| BsaI | GGTCTC | 1 cut(s) | 133 |
| BsaJI | CCNNGG | 2 cut(s) | 36, 144 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 1 cut(s) | 75 |
| BseDI | CCNNGG | 2 cut(s) | 36, 144 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseMII | CTCAG | 1 cut(s) | 25 |
| BseSI | GKGCMC | 1 cut(s) | 284 |
| BseXI | GCAGC | 2 cut(s) | 151, 173 |
| BshFI | GGCC | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 1 cut(s) | 284 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BsmAI | GTCTC | 2 cut(s) | 133, 209 |
| BsnI | GGCC | 1 cut(s) | 101 |
| Bso31I | GGTCTC | 1 cut(s) | 133 |
| Bsp1286I | GDGCHC | 1 cut(s) | 284 |
| Bsp143I | GATC | 3 cut(s) | 40, 64, 199 |
| BspANI | GGCC | 1 cut(s) | 101 |
| BspCNI | CTCAG | 1 cut(s) | 24 |
| BspPI | GGATC | 2 cut(s) | 48, 194 |
| BspTNI | GGTCTC | 1 cut(s) | 133 |
| BssECI | CCNNGG | 2 cut(s) | 36, 144 |
| BssMI | GATC | 3 cut(s) | 40, 64, 199 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst2UI | CCWGG | 1 cut(s) | 75 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 288 |
| BstDEI | CTNAG | 1 cut(s) | 11 |
| BstDSI | CCRYGG | 1 cut(s) | 36 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 207 |
| BstKTI | GATC | 3 cut(s) | 43, 67, 202 |
| BstMAI | GTCTC | 2 cut(s) | 133, 209 |
| BstMBI | GATC | 3 cut(s) | 40, 64, 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 288 |
| BstNI | CCWGG | 1 cut(s) | 75 |
| BstSCI | CCNGG | 1 cut(s) | 73 |
| BstSLI | GKGCMC | 1 cut(s) | 284 |
| BstV1I | GCAGC | 2 cut(s) | 151, 173 |
| BsuRI | GGCC | 1 cut(s) | 101 |
| BtgI | CCRYGG | 1 cut(s) | 36 |
| Cfr13I | GGNCC | 1 cut(s) | 100 |
| CsiI | ACCWGGT | 1 cut(s) | 73 |
| Csp6I | GTAC | 1 cut(s) | 149 |
| CviAII | CATG | 4 cut(s) | 110, 119, 197, 266 |
| CviJI | RGCY | 2 cut(s) | 101, 164 |
| CviKI_1 | RGCY | 2 cut(s) | 101, 164 |
| CviQI | GTAC | 1 cut(s) | 149 |
| DdeI | CTNAG | 1 cut(s) | 11 |
| DpnI | GATC | 3 cut(s) | 42, 66, 201 |
| DpnII | GATC | 3 cut(s) | 40, 64, 199 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco31I | GGTCTC | 1 cut(s) | 133 |
| Eco57I | CTGAAG | 1 cut(s) | 197 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 207 |
| EcoRII | CCWGG | 1 cut(s) | 73 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 4 cut(s) | 113, 122, 200, 269 |
| FaiI | YATR | 7 cut(s) | 33, 59, 91, 111, 120, 198, 267 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 269 |
| FatI | CATG | 4 cut(s) | 109, 118, 196, 265 |
| Fnu4HI | GCNGC | 2 cut(s) | 162, 165 |
| Fsp4HI | GCNGC | 2 cut(s) | 162, 165 |
| FspBI | CTAG | 1 cut(s) | 295 |
| GluI | GCNGC | 2 cut(s) | 162, 165 |
| HaeIII | GGCC | 1 cut(s) | 101 |
| Hin1II | CATG | 4 cut(s) | 113, 122, 200, 269 |
| HincII | GTYRAC | 1 cut(s) | 82 |
| HindII | GTYRAC | 1 cut(s) | 82 |
| HinfI | GANTC | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 224 |
| Hpy166II | GTNNAC | 3 cut(s) | 82, 194, 282 |
| Hpy188I | TCNGA | 2 cut(s) | 14, 177 |
| Hpy188III | TCNNGA | 1 cut(s) | 203 |
| Hpy8I | GTNNAC | 3 cut(s) | 82, 194, 282 |
| HpyCH4V | TGCA | 4 cut(s) | 167, 269, 282, 291 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 288 |
| HpyF3I | CTNAG | 1 cut(s) | 11 |
| Hsp92II | CATG | 4 cut(s) | 113, 122, 200, 269 |
| Kzo9I | GATC | 3 cut(s) | 40, 64, 199 |
| LpnPI | CCDG | 4 cut(s) | 60, 87, 168, 216 |
| Lsp1109I | GCAGC | 2 cut(s) | 151, 173 |
| MabI | ACCWGGT | 1 cut(s) | 73 |
| MaeI | CTAG | 1 cut(s) | 295 |
| MaeIII | GTNAC | 1 cut(s) | 233 |
| MalI | GATC | 3 cut(s) | 42, 66, 201 |
| MboI | GATC | 3 cut(s) | 40, 64, 199 |
| MboII | GAAGA | 1 cut(s) | 190 |
| MhlI | GDGCHC | 1 cut(s) | 284 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 4 cut(s) | 8, 20, 108, 118 |
| MseI | TTAA | 1 cut(s) | 95 |
| MslI | CAYNNNNRTG | 1 cut(s) | 56 |
| MspA1I | CMGCKG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 75 |
| MvaI | CCWGG | 1 cut(s) | 75 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 288 |
| NdeII | GATC | 3 cut(s) | 40, 64, 199 |
| NlaIII | CATG | 4 cut(s) | 113, 122, 200, 269 |
| PkrI | GCNGC | 2 cut(s) | 163, 166 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| Psp6I | CCWGG | 1 cut(s) | 73 |
| PspGI | CCWGG | 1 cut(s) | 73 |
| PspPI | GGNCC | 1 cut(s) | 100 |
| PvuII | CAGCTG | 1 cut(s) | 164 |
| RsaI | GTAC | 1 cut(s) | 150 |
| RsaNI | GTAC | 1 cut(s) | 149 |
| RseI | CAYNNNNRTG | 1 cut(s) | 56 |
| SaqAI | TTAA | 1 cut(s) | 95 |
| SatI | GCNGC | 2 cut(s) | 162, 165 |
| Sau3AI | GATC | 3 cut(s) | 40, 64, 199 |
| Sau96I | GGNCC | 1 cut(s) | 100 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 1 cut(s) | 75 |
| SduI | GDGCHC | 1 cut(s) | 284 |
| SetI | ASST | 6 cut(s) | 79, 129, 146, 166, 214, 287 |
| SexAI | ACCWGGT | 1 cut(s) | 73 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 56 |
| SmlI | CTYRAG | 1 cut(s) | 275 |
| SmoI | CTYRAG | 1 cut(s) | 275 |
| SspMI | CTAG | 1 cut(s) | 295 |
| StyD4I | CCNGG | 1 cut(s) | 73 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| Tru1I | TTAA | 1 cut(s) | 95 |
| Tru9I | TTAA | 1 cut(s) | 95 |
| TseI | GCWGC | 2 cut(s) | 161, 164 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 53 |
| VneI | GTGCAC | 1 cut(s) | 280 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 207 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 295 |