Rw3G020900

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000106
Physical Location & Seq
Forward (+)
24992104 .. 24993550
1447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G020900.1

Sequence Viewer

Length: 1149 bp
ATGACTGGAAAAGATGTTGAGTCCTCAAATACTGGCGGTTCATCCTCTGTTGACCCAGCTAATCCTTTATTCCTCCACCATTCAGATCATCCTGGCCTACTCCTTGTTTCAAAACGATTAAACGGTGACAACTACAACTCTTGGTACCGTGCTATGAGAATCTCTCTAAGTGCCAAGAACAAGACAGGTTTCATAACCGGCAAGATCAAGGAACCTAATGAGGCTTTGAATCCTGATGAGCATGCTCTTTGGCAGCGTTGCAATGACATGGTGCTCTCATGGATCCTAAATTCCCTTGAGCCAGAGATATCTGATTCTGTCCTTTCATGCGGCACACCTCATGCTATTTGGGAAGATCTTCGTGAGAGGTTTTCTTTGGGCAACGCTCCTCGTATATTCCAGATTCAGCGGGACATCTACAAGATTGAGCAAGGTCAGATGTCTGTTGCGGCATATTACACAAAATTGAAGGGTTTATGGGATGAGCTTGCGTCCTTTAATTCAGTGACTTGTACTTGTGGTCAGAATGATCGTACCAAACTTATGCAGTTTCTCATGGGACTCAATGAGTCATATTCAGGTACAAGAGGTCAGATTTTACTAATGAATCCTTTACCCTCAGTCCGTCAAGCCTATGCTTCTGTTGTGCAAGAAGAAAAGCAACGTGAGTTGGGTTCCTCCATGATTATGCCATCTAGTACAGCAGCCATGGATGTCCGTGGGAACAATAACATGATCAAAATTCAACCAAACAATCTTAGTGGAAATCAACGTAACAAGGAGCCATTCCAATGCACTTATTGTGGAGACCTCTATCATAGGGAGGCAACATGTTATAAGAAGATTGGTTACCCACCTGGATATCGTCGAAATAAAAGTCGAAATCAATACCACCGTCAAGGCAACAGCGGCAATTCACAAGCTACATCCACTCCTTCAGCCAACCTTGTTGATTCTAATGGAGACAATTCCACTCCCACATTTCAGGAGCTCCGAGCCACCATGCCCAATCTCACAGATGAACAATATGTTCAAATTCTTGCGGCGTTGAATTCCAAACCTGCAGTACCTCAAGCTAATGCAGCTTCTGCATCTGTTTCTGAATTTTCTTCAGGACTTGGTTACGAGGACGATGATTGGTGTGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3 Retrotrans_gag

Protein Analysis

382

Amino Acids

42.46

Weight (kDa)

6.4

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 26 - 73 2.7e-20 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 52 - 224 1.2e-08 gag-polypeptide of LTR copia-type
Retrotrans_gag PF03732 93 - 190 6.1e-07 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 837
Acc36I ACCTGC 1 cut(s) 1069
Acc65I GGTACC 1 cut(s) 144
AccB1I GGYRCC 1 cut(s) 144
AciI CCGC 6 cut(s) 36, 330, 409, 449, 909, 1043
AclWI GGATC 2 cut(s) 277, 290
AcsI RAATTY 5 cut(s) 289, 741, 1035, 1051, 1103
AcuI CTGAAG 2 cut(s) 921, 1095
AfaI GTAC 6 cut(s) 146, 514, 535, 583, 700, 1068
AflIII ACRYGT 1 cut(s) 830
AgsI TTSAA 6 cut(s) 111, 229, 469, 746, 1034, 1051
AjnI CCWGG 2 cut(s) 91, 856
AluBI AGCT 6 cut(s) 59, 487, 923, 991, 1076, 1085
AluI AGCT 6 cut(s) 59, 487, 923, 991, 1076, 1085
Alw21I GWGCWC 2 cut(s) 276, 993
Alw26I GTCTC 2 cut(s) 801, 957
AlwI GGATC 2 cut(s) 277, 290
AlwNI CAGNNNCTG 1 cut(s) 1088
AoxI GGCC 1 cut(s) 94
ApeKI GCWGC 3 cut(s) 253, 704, 1082
ApoI RAATTY 5 cut(s) 289, 741, 1035, 1051, 1103
ArsI GACNNNNNNTTYG 2 cut(s) 862, 894
Asp700I GAANNNNTTC 1 cut(s) 357
Asp718I GGTACC 1 cut(s) 144
AsuHPI GGTGA 1 cut(s) 137
BamHI GGATCC 1 cut(s) 282
BanI GGYRCC 1 cut(s) 144
BanII GRGCYC 1 cut(s) 993
BarI GAAGNNNNNNTAC 2 cut(s) 833, 865
Bbv12I GWGCWC 2 cut(s) 276, 993
BbvI GCAGC 3 cut(s) 265, 716, 1094
BccI CCATC 1 cut(s) 700
BciT130I CCWGG 2 cut(s) 93, 858
BclI TGATCA 1 cut(s) 735
BcoDI GTCTC 2 cut(s) 801, 957
BfaI CTAG 1 cut(s) 696
BfmI CTRYAG 1 cut(s) 1062
BfuAI ACCTGC 1 cut(s) 1069
BglII AGATCT 1 cut(s) 355
BisI GCNGC 7 cut(s) 254, 331, 450, 705, 910, 1044, 1083
BlsI GCNGC 7 cut(s) 255, 332, 451, 706, 911, 1045, 1084
Bme1390I CCNGG 2 cut(s) 93, 858
BmiI GGNNCC 5 cut(s) 146, 213, 284, 676, 783
BmrFI CCNGG 2 cut(s) 93, 858
BmsI GCATC 1 cut(s) 1100
BplI GAGNNNNNCTC 2 cut(s) 148, 180
BpuEI CTTGAG 2 cut(s) 317, 1056
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 2 cut(s) 708, 718
BsaXI ACNNNNNCTCC 2 cut(s) 916, 946
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 2 cut(s) 10, 37
Bse3DI GCAATG 1 cut(s) 268
BseBI CCWGG 2 cut(s) 93, 858
BseDI CCNNGG 2 cut(s) 708, 718
BseGI GGATG 5 cut(s) 41, 88, 487, 718, 926
BseMI GCAATG 1 cut(s) 268
BseMII CTCAG 1 cut(s) 633
BseNI ACTGG 2 cut(s) 10, 37
BseRI GAGGAG 1 cut(s) 378
BseXI GCAGC 3 cut(s) 265, 716, 1094
BseYI CCCAGC 1 cut(s) 55
BshFI GGCC 1 cut(s) 96
BshNI GGYRCC 1 cut(s) 144
BsiHKAI GWGCWC 2 cut(s) 276, 993
BsiSI CCGG 1 cut(s) 198
BslFI GGGAC 2 cut(s) 425, 573
BsmAI GTCTC 2 cut(s) 801, 957
BsmFI GGGAC 2 cut(s) 425, 573
BsnI GGCC 1 cut(s) 96
Bso31I GGTCTC 1 cut(s) 801
Bsp1286I GDGCHC 2 cut(s) 276, 993
Bsp143I GATC 6 cut(s) 85, 204, 282, 355, 529, 735
Bsp19I CCATGG 1 cut(s) 708
BspACI CCGC 6 cut(s) 36, 330, 409, 449, 909, 1043
BspANI GGCC 1 cut(s) 96
BspCNI CTCAG 1 cut(s) 632
BspLI GGNNCC 5 cut(s) 146, 213, 284, 676, 783
BspMAI CTGCAG 1 cut(s) 1066
BspMI ACCTGC 1 cut(s) 1069
BspPI GGATC 2 cut(s) 277, 290
BspT107I GGYRCC 1 cut(s) 144
BspTNI GGTCTC 1 cut(s) 801
BsrDI GCAATG 1 cut(s) 268
BsrFI RCCGGY 1 cut(s) 197
BsrI ACTGG 2 cut(s) 10, 37
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 2 cut(s) 708, 718
BssMI GATC 6 cut(s) 85, 204, 282, 355, 529, 735
BssT1I CCWWGG 1 cut(s) 708
Bst2UI CCWGG 2 cut(s) 93, 858
Bst4CI ACNGT 3 cut(s) 125, 149, 896
BstAPI GCANNNNNTGC 1 cut(s) 1088
BstC8I GCNNGC 2 cut(s) 243, 489
BstDEI CTNAG 3 cut(s) 167, 619, 758
BstDSI CCRYGG 2 cut(s) 708, 718
BstEII GGTNACC 1 cut(s) 848
BstF5I GGATG 5 cut(s) 41, 88, 487, 718, 926
BstKTI GATC 6 cut(s) 88, 207, 285, 358, 532, 738
BstMAI GTCTC 2 cut(s) 801, 957
BstMBI GATC 6 cut(s) 85, 204, 282, 355, 529, 735
BstMWI GCNNNNNNNGC 3 cut(s) 909, 1082, 1088
BstNI CCWGG 2 cut(s) 93, 858
BstNSI RCATGY 2 cut(s) 245, 834
BstPI GGTNACC 1 cut(s) 848
BstSCI CCNGG 2 cut(s) 91, 856
BstSFI CTRYAG 1 cut(s) 1062
BstV1I GCAGC 3 cut(s) 265, 716, 1094
BstX2I RGATCY 2 cut(s) 282, 355
BstYI RGATCY 2 cut(s) 282, 355
BsuRI GGCC 1 cut(s) 96
BtgI CCRYGG 2 cut(s) 708, 718
BtsCI GGATG 5 cut(s) 41, 88, 487, 718, 926
BtsIMutI CAGTG 1 cut(s) 510
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 2 cut(s) 243, 489
CaiI CAGNNNCTG 1 cut(s) 1088
Cfr10I RCCGGY 1 cut(s) 197
CseI GACGC 1 cut(s) 480
Csp6I GTAC 6 cut(s) 145, 513, 534, 582, 699, 1067
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviQI GTAC 6 cut(s) 145, 513, 534, 582, 699, 1067
DdeI CTNAG 3 cut(s) 167, 619, 758
DpnI GATC 6 cut(s) 87, 206, 284, 357, 531, 737
DpnII GATC 6 cut(s) 85, 204, 282, 355, 529, 735
Ecl136II GAGCTC 1 cut(s) 991
Eco130I CCWWGG 1 cut(s) 708
Eco24I GRGCYC 1 cut(s) 993
Eco31I GGTCTC 1 cut(s) 801
Eco32I GATATC 2 cut(s) 309, 863
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 2 cut(s) 921, 1095
Eco91I GGTNACC 1 cut(s) 848
EcoICRI GAGCTC 1 cut(s) 991
EcoO65I GGTNACC 1 cut(s) 848
EcoRI GAATTC 1 cut(s) 1051
EcoRII CCWGG 2 cut(s) 91, 856
EcoRV GATATC 2 cut(s) 309, 863
EcoT14I CCWWGG 1 cut(s) 708
EcoT38I GRGCYC 1 cut(s) 993
ErhI CCWWGG 1 cut(s) 708
FaqI GGGAC 2 cut(s) 425, 573
FauI CCCGC 1 cut(s) 402
FbaI TGATCA 1 cut(s) 735
Fnu4HI GCNGC 7 cut(s) 254, 331, 450, 705, 910, 1044, 1083
FokI GGATG 5 cut(s) 28, 75, 494, 725, 913
FriOI GRGCYC 1 cut(s) 993
Fsp4HI GCNGC 7 cut(s) 254, 331, 450, 705, 910, 1044, 1083
FspBI CTAG 1 cut(s) 696
GluI GCNGC 7 cut(s) 254, 331, 450, 705, 910, 1044, 1083
GsaI CCCAGC 1 cut(s) 59
HaeIII GGCC 1 cut(s) 96
HapII CCGG 1 cut(s) 198
HgaI GACGC 1 cut(s) 480
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HinfI GANTC 9 cut(s) 20, 159, 229, 314, 403, 561, 569, 607, 953
HpaII CCGG 1 cut(s) 198
HphI GGTGA 1 cut(s) 137
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 7 cut(s) 85, 313, 438, 525, 594, 995, 1102
Hpy188III TCNNGA 5 cut(s) 233, 362, 400, 986, 1113
Hpy8I GTNNAC 1 cut(s) 52
Hpy99I CGWCG 1 cut(s) 870
HpyAV CCTTC 2 cut(s) 463, 945
HpyCH4III ACNGT 3 cut(s) 125, 149, 896
HpyCH4IV ACGT 2 cut(s) 664, 772
HpyCH4V TGCA 7 cut(s) 261, 547, 649, 795, 1064, 1082, 1091
HpyF10VI GCNNNNNNNGC 3 cut(s) 909, 1082, 1088
HpyF3I CTNAG 3 cut(s) 167, 619, 758
HpySE526I ACGT 2 cut(s) 664, 772
KpnI GGTACC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 735
Kzo9I GATC 6 cut(s) 85, 204, 282, 355, 529, 735
LmnI GCTCC 4 cut(s) 391, 781, 988, 996
Lsp1109I GCAGC 3 cut(s) 265, 716, 1094
LweI GCATC 1 cut(s) 1100
MaeI CTAG 1 cut(s) 696
MaeII ACGT 2 cut(s) 664, 772
MaeIII GTNAC 5 cut(s) 125, 505, 773, 848, 1121
MalI GATC 6 cut(s) 87, 206, 284, 357, 531, 737
MboI GATC 6 cut(s) 85, 204, 282, 355, 529, 735
MboII GAAGA 5 cut(s) 350, 365, 665, 853, 1101
MflI RGATCY 2 cut(s) 282, 355
MhlI GDGCHC 2 cut(s) 276, 993
MluCI AATT 9 cut(s) 289, 464, 499, 741, 913, 967, 1035, 1051, 1103
MlyI GAGTC 3 cut(s) 29, 555, 578
MroXI GAANNNNTTC 1 cut(s) 357
MseI TTAA 2 cut(s) 119, 498
MslI CAYNNNNRTG 2 cut(s) 686, 790
MspA1I CMGCKG 2 cut(s) 409, 909
MspI CCGG 1 cut(s) 198
MspR9I CCNGG 2 cut(s) 93, 858
MvaI CCWGG 2 cut(s) 93, 858
MwoI GCNNNNNNNGC 3 cut(s) 909, 1082, 1088
NcoI CCATGG 1 cut(s) 708
NdeII GATC 6 cut(s) 85, 204, 282, 355, 529, 735
NlaIV GGNNCC 5 cut(s) 146, 213, 284, 676, 783
NmuCI GTSAC 2 cut(s) 125, 505
NspI RCATGY 2 cut(s) 245, 834
PaeI GCATGC 1 cut(s) 245
PciI ACATGT 1 cut(s) 830
PdmI GAANNNNTTC 1 cut(s) 357
PfeI GAWTC 6 cut(s) 159, 229, 314, 403, 607, 953
PkrI GCNGC 7 cut(s) 255, 332, 451, 706, 911, 1045, 1084
PleI GAGTC 3 cut(s) 28, 555, 577
PpsI GAGTC 3 cut(s) 28, 555, 577
PscI ACATGT 1 cut(s) 830
PsiI TTATAA 1 cut(s) 837
Psp124BI GAGCTC 1 cut(s) 993
Psp6I CCWGG 2 cut(s) 91, 856
PspEI GGTNACC 1 cut(s) 848
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 91, 856
PspN4I GGNNCC 5 cut(s) 146, 213, 284, 676, 783
PstI CTGCAG 1 cut(s) 1066
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 2 cut(s) 282, 355
RsaI GTAC 6 cut(s) 146, 514, 535, 583, 700, 1068
RsaNI GTAC 6 cut(s) 145, 513, 534, 582, 699, 1067
RseI CAYNNNNRTG 2 cut(s) 686, 790
SacI GAGCTC 1 cut(s) 993
SaqAI TTAA 2 cut(s) 119, 498
SatI GCNGC 7 cut(s) 254, 331, 450, 705, 910, 1044, 1083
Sau3AI GATC 6 cut(s) 85, 204, 282, 355, 529, 735
SchI GAGTC 3 cut(s) 29, 555, 578
ScrFI CCNGG 2 cut(s) 93, 858
SduI GDGCHC 2 cut(s) 276, 993
SfaNI GCATC 1 cut(s) 1100
SfcI CTRYAG 1 cut(s) 1062
SmiMI CAYNNNNRTG 2 cut(s) 686, 790
SmlI CTYRAG 2 cut(s) 296, 1071
SmoI CTYRAG 2 cut(s) 296, 1071
SphI GCATGC 1 cut(s) 245
Sse9I AATT 9 cut(s) 289, 464, 499, 741, 913, 967, 1035, 1051, 1103
SsiI CCGC 6 cut(s) 36, 330, 409, 449, 909, 1043
SspMI CTAG 1 cut(s) 696
SstI GAGCTC 1 cut(s) 993
StyD4I CCNGG 2 cut(s) 91, 856
StyI CCWWGG 1 cut(s) 708
TaaI ACNGT 3 cut(s) 125, 149, 896
TaiI ACGT 2 cut(s) 667, 775
TaqI TCGA 2 cut(s) 868, 880
TasI AATT 9 cut(s) 289, 464, 499, 741, 913, 967, 1035, 1051, 1103
TatI WGTACW 2 cut(s) 512, 698
TauI GCSGC 4 cut(s) 333, 452, 912, 1046
TfiI GAWTC 6 cut(s) 159, 229, 314, 403, 607, 953
Tru1I TTAA 2 cut(s) 119, 498
Tru9I TTAA 2 cut(s) 119, 498
TscAI CASTG 1 cut(s) 510
TseFI GTSAC 2 cut(s) 125, 505
TseI GCWGC 3 cut(s) 253, 704, 1082
Tsp45I GTSAC 2 cut(s) 125, 505
TspDTI ATGAA 5 cut(s) 30, 181, 315, 620, 1035
TspGWI ACGGA 2 cut(s) 614, 707
TspRI CASTG 1 cut(s) 510
XapI RAATTY 5 cut(s) 289, 741, 1035, 1051, 1103
XceI RCATGY 2 cut(s) 245, 834
XmnI GAANNNNTTC 1 cut(s) 357
XspI CTAG 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.