gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 169 |
| AcvI | CACGTG | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 200 |
| AflIII | ACRYGT | 2 cut(s) | 111, 300 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AjnI | CCWGG | 1 cut(s) | 271 |
| AleI | CACNNNNGTG | 1 cut(s) | 114 |
| AluBI | AGCT | 1 cut(s) | 291 |
| AluI | AGCT | 1 cut(s) | 291 |
| AlwI | GGATC | 1 cut(s) | 169 |
| AoxI | GGCC | 1 cut(s) | 153 |
| AspS9I | GGNCC | 1 cut(s) | 153 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| AsuII | TTCGAA | 1 cut(s) | 306 |
| AsuNHI | GCTAGC | 1 cut(s) | 46 |
| BbrPI | CACGTG | 1 cut(s) | 301 |
| BccI | CCATC | 2 cut(s) | 143, 227 |
| BciT130I | CCWGG | 1 cut(s) | 273 |
| BfaI | CTAG | 1 cut(s) | 47 |
| Bme1390I | CCNGG | 1 cut(s) | 273 |
| BmgT120I | GGNCC | 1 cut(s) | 153 |
| BmiI | GGNNCC | 1 cut(s) | 154 |
| BmrFI | CCNGG | 1 cut(s) | 273 |
| BmtI | GCTAGC | 1 cut(s) | 50 |
| Bpu14I | TTCGAA | 1 cut(s) | 306 |
| BsaAI | YACGTR | 1 cut(s) | 301 |
| BsaBI | GATNNNNATC | 1 cut(s) | 218 |
| BsaWI | WCCGGW | 1 cut(s) | 320 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 200 |
| Bse1I | ACTGG | 2 cut(s) | 63, 194 |
| Bse8I | GATNNNNATC | 1 cut(s) | 218 |
| BseBI | CCWGG | 1 cut(s) | 273 |
| BseGI | GGATG | 3 cut(s) | 222, 238, 329 |
| BseJI | GATNNNNATC | 1 cut(s) | 218 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BseNI | ACTGG | 2 cut(s) | 63, 194 |
| BseRI | GAGGAG | 1 cut(s) | 172 |
| BshFI | GGCC | 1 cut(s) | 155 |
| BsiSI | CCGG | 1 cut(s) | 321 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BsmI | GAATGC | 1 cut(s) | 282 |
| BsnI | GGCC | 1 cut(s) | 155 |
| Bsp119I | TTCGAA | 1 cut(s) | 306 |
| Bsp143I | GATC | 3 cut(s) | 161, 213, 219 |
| BspANI | GGCC | 1 cut(s) | 155 |
| BspLI | GGNNCC | 1 cut(s) | 154 |
| BspOI | GCTAGC | 1 cut(s) | 50 |
| BspPI | GGATC | 1 cut(s) | 169 |
| BspT104I | TTCGAA | 1 cut(s) | 306 |
| BsrI | ACTGG | 2 cut(s) | 63, 194 |
| BssMI | GATC | 3 cut(s) | 161, 213, 219 |
| Bst2UI | CCWGG | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 40 |
| BstBAI | YACGTR | 1 cut(s) | 301 |
| BstBI | TTCGAA | 1 cut(s) | 306 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 103 |
| BstF5I | GGATG | 3 cut(s) | 222, 238, 329 |
| BstKTI | GATC | 3 cut(s) | 164, 216, 222 |
| BstMBI | GATC | 3 cut(s) | 161, 213, 219 |
| BstNI | CCWGG | 1 cut(s) | 273 |
| BstNSI | RCATGY | 1 cut(s) | 115 |
| BstSCI | CCNGG | 1 cut(s) | 271 |
| BstX2I | RGATCY | 1 cut(s) | 161 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 233 |
| BstYI | RGATCY | 1 cut(s) | 161 |
| BsuRI | GGCC | 1 cut(s) | 155 |
| BtsCI | GGATG | 3 cut(s) | 222, 238, 329 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 103 |
| Cfr13I | GGNCC | 1 cut(s) | 153 |
| CviAII | CATG | 2 cut(s) | 56, 112 |
| CviJI | RGCY | 3 cut(s) | 69, 155, 291 |
| CviKI_1 | RGCY | 3 cut(s) | 69, 155, 291 |
| DpnI | GATC | 3 cut(s) | 163, 215, 221 |
| DpnII | GATC | 3 cut(s) | 161, 213, 219 |
| Eco72I | CACGTG | 1 cut(s) | 301 |
| EcoO109I | RGGNCCY | 1 cut(s) | 153 |
| EcoRII | CCWGG | 1 cut(s) | 271 |
| FaeI | CATG | 2 cut(s) | 59, 115 |
| FaiI | YATR | 4 cut(s) | 57, 113, 159, 269 |
| FatI | CATG | 2 cut(s) | 55, 111 |
| FokI | GGATG | 2 cut(s) | 209, 245 |
| FspBI | CTAG | 1 cut(s) | 47 |
| HaeIII | GGCC | 1 cut(s) | 155 |
| HapII | CCGG | 1 cut(s) | 321 |
| Hin1II | CATG | 2 cut(s) | 59, 115 |
| HindIII | AAGCTT | 1 cut(s) | 289 |
| HinfI | GANTC | 4 cut(s) | 8, 59, 92, 179 |
| HpaII | CCGG | 1 cut(s) | 321 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 2 cut(s) | 217, 226 |
| HpyAV | CCTTC | 2 cut(s) | 194, 223 |
| HpyCH4III | ACNGT | 1 cut(s) | 40 |
| HpyCH4IV | ACGT | 1 cut(s) | 300 |
| HpyCH4V | TGCA | 3 cut(s) | 101, 280, 298 |
| HpySE526I | ACGT | 1 cut(s) | 300 |
| Hsp92II | CATG | 2 cut(s) | 59, 115 |
| Kzo9I | GATC | 3 cut(s) | 161, 213, 219 |
| LpnPI | CCDG | 6 cut(s) | 76, 81, 207, 239, 258, 285 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MaeII | ACGT | 1 cut(s) | 300 |
| MaeIII | GTNAC | 1 cut(s) | 176 |
| MalI | GATC | 3 cut(s) | 163, 215, 221 |
| MboI | GATC | 3 cut(s) | 161, 213, 219 |
| MboII | GAAGA | 3 cut(s) | 41, 223, 254 |
| MflI | RGATCY | 1 cut(s) | 161 |
| MlyI | GAGTC | 2 cut(s) | 86, 173 |
| MnlI | CCTC | 1 cut(s) | 193 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| MspI | CCGG | 1 cut(s) | 321 |
| MspR9I | CCNGG | 1 cut(s) | 273 |
| Mva1269I | GAATGC | 1 cut(s) | 282 |
| MvaI | CCWGG | 1 cut(s) | 273 |
| NdeII | GATC | 3 cut(s) | 161, 213, 219 |
| NheI | GCTAGC | 1 cut(s) | 46 |
| NlaIII | CATG | 2 cut(s) | 59, 115 |
| NlaIV | GGNNCC | 1 cut(s) | 154 |
| NmuCI | GTSAC | 1 cut(s) | 176 |
| NspI | RCATGY | 1 cut(s) | 115 |
| NspV | TTCGAA | 1 cut(s) | 306 |
| OliI | CACNNNNGTG | 1 cut(s) | 114 |
| PciI | ACATGT | 1 cut(s) | 111 |
| PctI | GAATGC | 1 cut(s) | 282 |
| PfeI | GAWTC | 2 cut(s) | 8, 59 |
| PleI | GAGTC | 2 cut(s) | 86, 173 |
| PmaCI | CACGTG | 1 cut(s) | 301 |
| PmlI | CACGTG | 1 cut(s) | 301 |
| PpsI | GAGTC | 2 cut(s) | 86, 173 |
| Ppu21I | YACGTR | 1 cut(s) | 301 |
| PscI | ACATGT | 1 cut(s) | 111 |
| Psp6I | CCWGG | 1 cut(s) | 271 |
| PspCI | CACGTG | 1 cut(s) | 301 |
| PspGI | CCWGG | 1 cut(s) | 271 |
| PspN4I | GGNNCC | 1 cut(s) | 154 |
| PspPI | GGNCC | 1 cut(s) | 153 |
| PsuI | RGATCY | 1 cut(s) | 161 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| Sau3AI | GATC | 3 cut(s) | 161, 213, 219 |
| Sau96I | GGNCC | 1 cut(s) | 153 |
| SchI | GAGTC | 2 cut(s) | 86, 173 |
| ScrFI | CCNGG | 1 cut(s) | 273 |
| SetI | ASST | 3 cut(s) | 263, 293, 303 |
| SfuI | TTCGAA | 1 cut(s) | 306 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| SspMI | CTAG | 1 cut(s) | 47 |
| StyD4I | CCNGG | 1 cut(s) | 271 |
| TaaI | ACNGT | 1 cut(s) | 40 |
| TaiI | ACGT | 1 cut(s) | 303 |
| TaqI | TCGA | 1 cut(s) | 306 |
| TfiI | GAWTC | 2 cut(s) | 8, 59 |
| TseFI | GTSAC | 1 cut(s) | 176 |
| Tsp45I | GTSAC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| TspGWI | ACGGA | 1 cut(s) | 320 |
| XceI | RCATGY | 1 cut(s) | 115 |
| XspI | CTAG | 1 cut(s) | 47 |