FvH4_2g03582

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000106
Physical Location & Seq
Reverse (-)
2906749 .. 2907576
828 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g03582.t1

Sequence Viewer

Length: 828 bp
ATGACCGGTGGCATTATCACACCACCACTTCCCAAAACTGATGAATCGTCAGCAATCCCTAATGATTCCTTCAAGGCAGAGCCTTCAAATCCTTATTTCATTCAACATTCGGATCATCCCGGATTGGTTCTCGTCTCCAAACCCCTAAATGGGGATAACTATTCTGGTTGGAAAAGAGCTATGATTAGAGCTCTAAATTCCAAGAACAAGTTTGGATTTGTCAACGGTTCCGTCAAAGCTCCCTCAGAAGAAACTGATCCTGAAGGTTATGCGACTTGGTCGCGATCCAATGATATGGTTCATTCCTGGATCGTCAATTCTTGCGATCCAGAAATAGCCGATAGCGTAACCTATTACTCTAGTGCTCATGAAGTTTGGGAGGATCTCCATGAGCGTTTCTCTCAAGCAAATGCAACTCGCATCTTTGAGATTCAGCGAGATATTGCTTCTCTTCGACAAGAACAACTCTCTGTCTCAGTTTACTACACAAAATTGAAGGCTTTATGGGATGAATTAGCCGCACTCGATCCAACACAAGCAGCACAAACAGATCAACAAAGACTGATGCAATTTCTAATGGGATTGAATGAAACATACCAGGCTATCCGTGGACAGATCCTTCTCATGAAGCCTTTACCCATCGTCCGTCAAGCCTTCTCTTCTGTTCTCCAAGAAGAAAAGCAGCGCCTGATTGCCGCAACTCACACTATGGAGGATGCCGGCAGCGTCGCCATGGCCGTCCGATTTGGGAATAGGAGGCCGGCAGCAGAAACTCGAAGTGGTCAAGCCTATCGCAACGACGCTGGTGGAGCTCATTGTGGCGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_3

Protein Analysis

276

Amino Acids

30.58

Weight (kDa)

5.82

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 35 - 81 1.1e-22 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 65 - 229 8.5e-13 gag-polypeptide of LTR copia-type
Retrotrans_gag PF03732 123 - 197 4.5e-06 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000106)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G20980 AT3G21000
fragaria_vesca FvH4_1g15931 FvH4_1g15931 FvH4_1g18381 FvH4_1g18382 FvH4_1g22571 FvH4_1g24950 FvH4_1g29372 FvH4_2g03582 FvH4_2g09851 FvH4_2g13112 FvH4_2g20843 FvH4_2g22701 FvH4_2g22702 FvH4_2g23403 FvH4_2g40201 FvH4_3g03542 FvH4_3g03543 FvH4_3g04761 FvH4_3g10464 FvH4_3g12741 FvH4_3g15781 FvH4_3g30981 FvH4_4g00985 FvH4_4g07035 FvH4_4g08192 FvH4_4g08211 FvH4_4g08553 FvH4_4g14242 FvH4_4g14243 FvH4_4g14641 FvH4_4g14843 FvH4_4g14844 FvH4_4g15061 FvH4_4g16281 FvH4_4g19152 FvH4_4g26451 FvH4_5g06442 FvH4_5g22521 FvH4_5g24301 FvH4_5g38641 FvH4_6g02393 FvH4_6g12782 FvH4_6g13871 FvH4_6g19391 FvH4_6g20105 FvH4_6g21292 FvH4_6g23581 FvH4_6g29153 FvH4_6g29691 FvH4_6g30871 FvH4_6g33351 FvH4_6g37042 FvH4_6g38781 FvH4_6g40340 FvH4_7g11221 FvH4_7g23352 FvH4_7g23352 FvH4_7g31212 FvH4_7g32172 FvH4_7g32173 FvH4_7g33701
malus_domestica MD03G1006900.v1.1 MD04G1039100.v1.1 MD04G1239100.v1.1 MD05G1048700.v1.1 MD08G1001800.v1.1 MD09G1165800.v1.1 MD11G1065200.v1.1 MD11G1138200.v1.1 MD14G1033300.v1.1 MD14G1173900.v1.1 MD15G1218200.v1.1 MD16G1034000.v1.1
prunus_persica Prupe.1G219500_v2.0.a1 Prupe.2G169400_v2.0.a1 Prupe.4G109700_v2.0.a1 Prupe.7G022000_v2.0.a1
pyrus_communis pycom01g02000 pycom02g13350 pycom03g01010 pycom04g05000 pycom04g06100 pycom05g05580 pycom05g09950 pycom05g13280 pycom05g26610 pycom06g05940 pycom06g07760 pycom07g06120 pycom07g24780 pycom08g08820 pycom09g03600 pycom09g07200 pycom10g01280 pycom10g06730 pycom10g08410 pycom10g25520 pycom11g00470 pycom11g05250 pycom11g25180 pycom12g08050 pycom13g14760 pycom13g28170 pycom15g14310 pycom15g19880 pycom15g24230 pycom15g33640 pycom16g02150 pycom16g16240 pycom16g20050 pycom16g21090 pycom17g06100
rosa_chinensis RchiOBHm_Chr1g0322161 RchiOBHm_Chr1g0326341 RchiOBHm_Chr1g0357701 RchiOBHm_Chr1g0379861 RchiOBHm_Chr1g0383421 RchiOBHm_Chr2g0093981 RchiOBHm_Chr2g0139051 RchiOBHm_Chr2g0145501 RchiOBHm_Chr3g0450971 RchiOBHm_Chr3g0451441 RchiOBHm_Chr3g0457411 RchiOBHm_Chr4g0436261 RchiOBHm_Chr5g0051431 RchiOBHm_Chr5g0064031 RchiOBHm_Chr5g0073141 RchiOBHm_Chr5g0080061 RchiOBHm_Chr7g0200561 RchiOBHm_Chr7g0235911
rosa_laevigata RLG00000000145 RLG00000000429 RLG00000020339 RLG00000035212
rosa_multiflora Rmu_co7977988.1_g000001 Rmu_co8037866.1_g000001 Rmu_co8243895.1_g000001 Rmu_co8363787.1_g000001 Rmu_co8381003.1_g000001 Rmu_sc0000263.1_g000006 Rmu_sc0000349.1_g000002 Rmu_sc0000455.1_g000031 Rmu_sc0000936.1_g000022 Rmu_sc0001035.1_g000023 Rmu_sc0001169.1_g000019 Rmu_sc0001250.1_g000026 Rmu_sc0002200.1_g000051 Rmu_sc0002230.1_g000027 Rmu_sc0002591.1_g000039 Rmu_sc0003182.1_g000003 Rmu_sc0003441.1_g000068 Rmu_sc0003722.1_g000018 Rmu_sc0003764.1_g000007 Rmu_sc0006014.1_g000016 Rmu_sc0012582.1_g000002 Rmu_sc0013519.1_g000002 Rmu_sc0014550.1_g000005 Rmu_sc0014857.1_g000007 Rmu_sc0019855.1_g000001 Rmu_sc0030839.1_g000001 Rmu_sc0031308.1_g000001
rosa_roxburghii Rroxscaffold_1G00011290 Rroxscaffold_1G00041340 Rroxscaffold_1G00053780 Rroxscaffold_1G00059130 Rroxscaffold_1G00061580 Rroxscaffold_2G00080940 Rroxscaffold_2G00109540 Rroxscaffold_3G00228400 Rroxscaffold_3G00237710 Rroxscaffold_4G00285210 Rroxscaffold_4G00299600 Rroxscaffold_4G00324940 Rroxscaffold_4G00330580 Rroxscaffold_5G00333000 Rroxscaffold_5G00347920 Rroxscaffold_5G00375310 Rroxscaffold_6G00394760 Rroxscaffold_6G00406260 Rroxscaffold_7G00165690 Rroxscaffold_7G00187680
rosa_rugosa Rorug01G0050200 Rorug02G0273800 Rorug06G0490600 Rorug06G0490600 Rorug06G0490700
rosa_samantha Rh1AG348400 Rh5AG222600 Rh6DG000500 Rh6DG194500 Rh7BG452700
rosa_wichuraiana Rw0G003060 Rw0G010530 Rw0G012970 Rw0G022560 Rw0G023390 Rw1G001270 Rw1G001530 Rw1G006070 Rw1G008210 Rw1G022090 Rw1G023320 Rw2G003790 Rw2G004140 Rw2G005280 Rw2G006460 Rw2G019620 Rw2G019840 Rw2G022530 Rw2G023280 Rw2G024990 Rw2G042380 Rw2G051390 Rw3G001640 Rw3G016720 Rw3G017100 Rw3G020890 Rw3G020900 Rw3G021100 Rw4G004820 Rw4G014950 Rw4G030920 Rw4G031400 Rw5G008500 Rw5G017950 Rw5G020170 Rw5G030160 Rw5G033050 Rw5G034640 Rw5G043920 Rw6G005060 Rw6G005540 Rw6G006720 Rw6G008460 Rw6G008670 Rw6G014780 Rw6G019100 Rw6G019350 Rw6G026310 Rw7G016810 Rw7G019180 Rw7G022890 Rw7G025880 Rw7G026390 Rw7G028340 Rw7G034850 Rw7G035170 Rw7G035420 Rw7G037990 Rw7G041560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 821
AccII CGCG 1 cut(s) 283
AciI CCGC 2 cut(s) 519, 696
AclWI GGATC 8 cut(s) 120, 251, 279, 317, 320, 390, 521, 610
AcoI YGGCCR 1 cut(s) 735
AcsI RAATTY 1 cut(s) 196
AcuI CTGAAG 1 cut(s) 282
AcyI GRCGYC 1 cut(s) 822
AfiI CCNNNNNNNGG 3 cut(s) 149, 150, 151
AgeI ACCGGT 1 cut(s) 5
AgsI TTSAA 5 cut(s) 73, 87, 104, 496, 586
AjnI CCWGG 2 cut(s) 305, 597
AluBI AGCT 4 cut(s) 179, 191, 239, 812
AluI AGCT 4 cut(s) 179, 191, 239, 812
Alw21I GWGCWC 3 cut(s) 193, 367, 814
Alw26I GTCTC 2 cut(s) 139, 478
AlwI GGATC 8 cut(s) 120, 251, 279, 317, 320, 390, 521, 610
AlwNI CAGNNNCTG 1 cut(s) 688
AoxI GGCC 2 cut(s) 735, 758
ApeKI GCWGC 4 cut(s) 539, 682, 723, 764
ApoI RAATTY 1 cut(s) 196
AsiGI ACCGGT 1 cut(s) 5
AspLEI GCGC 2 cut(s) 687, 824
AsuC2I CCSGG 1 cut(s) 120
BanI GGYRCC 1 cut(s) 821
BanII GRGCYC 2 cut(s) 193, 814
Bbv12I GWGCWC 3 cut(s) 193, 367, 814
BbvI GCAGC 4 cut(s) 551, 694, 735, 776
BccI CCATC 1 cut(s) 647
BceAI ACGGC 1 cut(s) 722
BciT130I CCWGG 2 cut(s) 307, 599
BcnI CCSGG 1 cut(s) 120
BcoDI GTCTC 2 cut(s) 139, 478
BfaI CTAG 2 cut(s) 360, 826
BfoI RGCGCY 2 cut(s) 688, 825
BisI GCNGC 6 cut(s) 519, 540, 683, 696, 724, 765
BlsI GCNGC 6 cut(s) 520, 541, 684, 697, 725, 766
Bme1390I CCNGG 3 cut(s) 120, 307, 599
BmiI GGNNCC 2 cut(s) 229, 823
BmrFI CCNGG 3 cut(s) 120, 307, 599
BmsI GCATC 3 cut(s) 429, 555, 706
BplI GAGNNNNNCTC 2 cut(s) 383, 415
BpuEI CTTGAG 1 cut(s) 387
BpuMI CCSGG 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 822
BsaJI CCNNGG 2 cut(s) 607, 732
BsaWI WCCGGW 1 cut(s) 5
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 150, 151
Bse118I RCCGGY 3 cut(s) 5, 719, 760
BseBI CCWGG 2 cut(s) 307, 599
BseDI CCNNGG 2 cut(s) 607, 732
BseGI GGATG 3 cut(s) 115, 514, 721
BseLI CCNNNNNNNGG 3 cut(s) 149, 150, 151
BseMII CTCAG 2 cut(s) 258, 489
BseXI GCAGC 4 cut(s) 551, 694, 735, 776
Bsh1236I CGCG 1 cut(s) 283
BshFI GGCC 2 cut(s) 737, 760
BshNI GGYRCC 1 cut(s) 821
BshTI ACCGGT 1 cut(s) 5
BsiHKAI GWGCWC 3 cut(s) 193, 367, 814
BsiSI CCGG 4 cut(s) 6, 120, 720, 761
BslI CCNNNNNNNGG 3 cut(s) 149, 150, 151
BsmAI GTCTC 2 cut(s) 139, 478
BsmBI CGTCTC 1 cut(s) 139
BsnI GGCC 2 cut(s) 737, 760
Bsp1286I GDGCHC 3 cut(s) 193, 367, 814
Bsp143I GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
Bsp19I CCATGG 1 cut(s) 732
Bsp68I TCGCGA 1 cut(s) 283
BspACI CCGC 2 cut(s) 519, 696
BspANI GGCC 2 cut(s) 737, 760
BspCNI CTCAG 2 cut(s) 257, 488
BspFNI CGCG 1 cut(s) 283
BspHI TCATGA 2 cut(s) 367, 624
BspLI GGNNCC 2 cut(s) 229, 823
BspPI GGATC 8 cut(s) 120, 251, 279, 317, 320, 390, 521, 610
BspT107I GGYRCC 1 cut(s) 821
BsrFI RCCGGY 3 cut(s) 5, 719, 760
BssAI RCCGGY 3 cut(s) 5, 719, 760
BssECI CCNNGG 2 cut(s) 607, 732
BssMI GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
BssNI GRCGYC 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 732
Bst2UI CCWGG 2 cut(s) 307, 599
Bst4CI ACNGT 1 cut(s) 227
Bst6I CTCTTC 2 cut(s) 456, 664
BstACI GRCGYC 1 cut(s) 822
BstC8I GCNNGC 2 cut(s) 721, 762
BstDEI CTNAG 2 cut(s) 244, 475
BstDSI CCRYGG 2 cut(s) 607, 732
BstF5I GGATG 3 cut(s) 115, 514, 721
BstFNI CGCG 1 cut(s) 283
BstH2I RGCGCY 2 cut(s) 688, 825
BstHHI GCGC 2 cut(s) 687, 824
BstKTI GATC 9 cut(s) 115, 259, 287, 312, 328, 385, 529, 553, 618
BstMAI GTCTC 2 cut(s) 139, 478
BstMBI GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
BstMWI GCNNNNNNNGC 1 cut(s) 809
BstNI CCWGG 2 cut(s) 307, 599
BstSCI CCNGG 3 cut(s) 118, 305, 597
BstUI CGCG 1 cut(s) 283
BstV1I GCAGC 4 cut(s) 551, 694, 735, 776
BstX2I RGATCY 2 cut(s) 382, 615
BstXI CCANNNNNNTGG 1 cut(s) 295
BstYI RGATCY 2 cut(s) 382, 615
BsuRI GGCC 2 cut(s) 737, 760
BtgI CCRYGG 2 cut(s) 607, 732
BtsCI GGATG 3 cut(s) 115, 514, 721
BtuMI TCGCGA 1 cut(s) 283
Cac8I GCNNGC 2 cut(s) 721, 762
CaiI CAGNNNCTG 1 cut(s) 688
CciI TCATGA 2 cut(s) 367, 624
CfoI GCGC 2 cut(s) 687, 824
Cfr10I RCCGGY 3 cut(s) 5, 719, 760
CseI GACGC 2 cut(s) 715, 809
CspAI ACCGGT 1 cut(s) 5
CviAII CATG 4 cut(s) 368, 389, 625, 733
DdeI CTNAG 2 cut(s) 244, 475
DinI GGCGCC 1 cut(s) 823
DpnI GATC 9 cut(s) 114, 258, 286, 311, 327, 384, 528, 552, 617
DpnII GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
EaeI YGGCCR 1 cut(s) 735
Eam1104I CTCTTC 2 cut(s) 456, 664
EarI CTCTTC 2 cut(s) 456, 664
Ecl136II GAGCTC 2 cut(s) 191, 812
Eco130I CCWWGG 1 cut(s) 732
Eco24I GRGCYC 2 cut(s) 193, 814
Eco53kI GAGCTC 2 cut(s) 191, 812
Eco57I CTGAAG 1 cut(s) 282
EcoICRI GAGCTC 2 cut(s) 191, 812
EcoRII CCWGG 2 cut(s) 305, 597
EcoT14I CCWWGG 1 cut(s) 732
EcoT38I GRGCYC 2 cut(s) 193, 814
EgeI GGCGCC 1 cut(s) 823
EheI GGCGCC 1 cut(s) 823
ErhI CCWWGG 1 cut(s) 732
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 4 cut(s) 371, 392, 628, 736
FatI CATG 4 cut(s) 367, 388, 624, 732
Fnu4HI GCNGC 6 cut(s) 519, 540, 683, 696, 724, 765
FokI GGATG 3 cut(s) 102, 521, 728
FriOI GRGCYC 2 cut(s) 193, 814
Fsp4HI GCNGC 6 cut(s) 519, 540, 683, 696, 724, 765
FspBI CTAG 2 cut(s) 360, 826
GlaI GCGC 2 cut(s) 686, 823
GluI GCNGC 6 cut(s) 519, 540, 683, 696, 724, 765
HaeII RGCGCY 2 cut(s) 688, 825
HaeIII GGCC 2 cut(s) 737, 760
HapII CCGG 4 cut(s) 6, 120, 720, 761
HgaI GACGC 2 cut(s) 715, 809
HhaI GCGC 2 cut(s) 687, 824
Hin1I GRCGYC 1 cut(s) 822
Hin1II CATG 4 cut(s) 371, 392, 628, 736
Hin6I GCGC 2 cut(s) 685, 822
HinP1I GCGC 2 cut(s) 685, 822
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HinfI GANTC 3 cut(s) 44, 65, 430
HpaII CCGG 4 cut(s) 6, 120, 720, 761
Hpy166II GTNNAC 3 cut(s) 223, 481, 611
Hpy188I TCNGA 3 cut(s) 112, 247, 743
Hpy188III TCNNGA 5 cut(s) 260, 282, 329, 368, 625
Hpy8I GTNNAC 3 cut(s) 223, 481, 611
Hpy99I CGWCG 2 cut(s) 731, 803
HpyAV CCTTC 6 cut(s) 79, 93, 257, 490, 629, 664
HpyCH4III ACNGT 1 cut(s) 227
HpyCH4V TGCA 2 cut(s) 413, 568
HpyF10VI GCNNNNNNNGC 1 cut(s) 809
HpyF3I CTNAG 2 cut(s) 244, 475
Hsp92I GRCGYC 1 cut(s) 822
Hsp92II CATG 4 cut(s) 371, 392, 628, 736
HspAI GCGC 2 cut(s) 685, 822
KasI GGCGCC 1 cut(s) 821
KroI GCCGGC 2 cut(s) 719, 760
KroNI GCCGGC 2 cut(s) 721, 762
Kzo9I GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
LmnI GCTCC 2 cut(s) 244, 809
Lsp1109I GCAGC 4 cut(s) 551, 694, 735, 776
LweI GCATC 3 cut(s) 429, 555, 706
MaeI CTAG 2 cut(s) 360, 826
MaeIII GTNAC 1 cut(s) 346
MalI GATC 9 cut(s) 114, 258, 286, 311, 327, 384, 528, 552, 617
MboI GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
MboII GAAGA 4 cut(s) 260, 443, 651, 686
MflI RGATCY 2 cut(s) 382, 615
MhlI GDGCHC 3 cut(s) 193, 367, 814
MluCI AATT 5 cut(s) 196, 316, 491, 512, 569
Mly113I GGCGCC 1 cut(s) 822
MmeI TCCRAC 2 cut(s) 149, 554
MnlI CCTC 4 cut(s) 253, 373, 706, 750
MroNI GCCGGC 2 cut(s) 719, 760
MspI CCGG 4 cut(s) 6, 120, 720, 761
MspR9I CCNGG 3 cut(s) 120, 307, 599
MvaI CCWGG 2 cut(s) 307, 599
MvnI CGCG 1 cut(s) 283
MwoI GCNNNNNNNGC 1 cut(s) 809
NaeI GCCGGC 2 cut(s) 721, 762
NarI GGCGCC 1 cut(s) 822
NciI CCSGG 1 cut(s) 120
NcoI CCATGG 1 cut(s) 732
NdeII GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
NgoMIV GCCGGC 2 cut(s) 719, 760
NlaIII CATG 4 cut(s) 371, 392, 628, 736
NlaIV GGNNCC 2 cut(s) 229, 823
NruI TCGCGA 1 cut(s) 283
PagI TCATGA 2 cut(s) 367, 624
PcsI WCGNNNNNNNCGW 1 cut(s) 735
PdiI GCCGGC 2 cut(s) 721, 762
PfeI GAWTC 3 cut(s) 44, 65, 430
PflFI GACNNNGTC 1 cut(s) 277
PfoI TCCNGGA 2 cut(s) 118, 305
PinAI ACCGGT 1 cut(s) 5
PkrI GCNGC 6 cut(s) 520, 541, 684, 697, 725, 766
PluTI GGCGCC 1 cut(s) 825
Psp124BI GAGCTC 2 cut(s) 193, 814
Psp6I CCWGG 2 cut(s) 305, 597
PspGI CCWGG 2 cut(s) 305, 597
PspN4I GGNNCC 2 cut(s) 229, 823
PstNI CAGNNNCTG 1 cut(s) 688
PsuI RGATCY 2 cut(s) 382, 615
PsyI GACNNNGTC 1 cut(s) 277
RruI TCGCGA 1 cut(s) 283
SacI GAGCTC 2 cut(s) 193, 814
SatI GCNGC 6 cut(s) 519, 540, 683, 696, 724, 765
Sau3AI GATC 9 cut(s) 112, 256, 284, 309, 325, 382, 526, 550, 615
ScrFI CCNGG 3 cut(s) 120, 307, 599
SduI GDGCHC 3 cut(s) 193, 367, 814
SetI ASST 6 cut(s) 181, 193, 241, 268, 353, 814
SfaNI GCATC 3 cut(s) 429, 555, 706
SfoI GGCGCC 1 cut(s) 823
SmlI CTYRAG 1 cut(s) 402
SmoI CTYRAG 1 cut(s) 402
Sse9I AATT 5 cut(s) 196, 316, 491, 512, 569
SsiI CCGC 2 cut(s) 519, 696
SspDI GGCGCC 1 cut(s) 821
SspMI CTAG 2 cut(s) 360, 826
SstI GAGCTC 2 cut(s) 193, 814
StyD4I CCNGG 3 cut(s) 118, 305, 597
StyI CCWWGG 1 cut(s) 732
TaaI ACNGT 1 cut(s) 227
TaqI TCGA 3 cut(s) 454, 525, 775
TasI AATT 5 cut(s) 196, 316, 491, 512, 569
TauI GCSGC 2 cut(s) 521, 698
TfiI GAWTC 3 cut(s) 44, 65, 430
TseI GCWGC 4 cut(s) 539, 682, 723, 764
TspDTI ATGAA 7 cut(s) 57, 88, 290, 384, 525, 603, 641
TspGWI ACGGA 3 cut(s) 220, 596, 635
Tth111I GACNNNGTC 1 cut(s) 277
XapI RAATTY 1 cut(s) 196
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XspI CTAG 2 cut(s) 360, 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.